Contig 004094:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009N12Sequence564004094 (8)gb|ADX99209.1|2e-128zeaxanthin epoxidase [Ipomoea nil]781004094 (8)gb|ADX99209.1|1e-134zeaxanthin epoxidase [Ipomoea nil]
JMFF017L03Sequence577004094 (8)gb|ADX99209.1|8e-131zeaxanthin epoxidase [Ipomoea nil]752004094 (8)gb|ADX99209.1|6e-127zeaxanthin epoxidase [Ipomoea nil]
JMFF035E12Sequence541016308gb|ADX99209.1|4e-125zeaxanthin epoxidase [Ipomoea nil]634004094 (8)gb|ADX99209.1|2e-91zeaxanthin epoxidase [Ipomoea nil]
JMFF041L08Sequence655013128 (6)emb|CDP10610.1|9e-73unnamed protein product [Coffea canephora]542004094 (8)gb|ADX99209.1|6e-60zeaxanthin epoxidase [Ipomoea nil]
JMSF049D03Sequence620004094 (8)gb|ADX99209.1|1e-127zeaxanthin epoxidase [Ipomoea nil]727004094 (8)gb|ADX99209.1|3e-132zeaxanthin epoxidase [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF009N12- GTCGT
JMFF017L03- GTCGT
                      ____________________________________________________________
consensus GTCGT
 
. : . : . : . : . : . :
JMFF009N12- GTTACCTTACTCGGGGATTCGATCCATGCTATGCAGCCAAATTTGGGTCAAGGGGGATGC
JMFF017L03- GTTGCCTTACTCGGGGATTCGATCCATGCTATGCAGCCAAATTTGGGTCAAGGGGGATGC
                      ____________________________________________________________
consensus GTTGCCTTACTCGGGGATTCGATCCATGCTATGCAGCCAAATTTGGGTCAAGGGGGATGC
 
. : . : . : . : . : . :
JMFF009N12- ATGGCCATAGAGGATGGGTATCAACTAGCTCTTGAGCTTGACAAAGCTTGGAGGCAAAGT
JMFF017L03- ATGGCCATAGAGGATGGGTATCAACTAGCTCTTGAGCTTGACAAAGCTTGGAGGCAAAGT
                      ____________________________________________________________
consensus ATGGCCATAGAGGATGGGTATCAACTAGCTCTTGAGCTTGACAAAGCTTGGAGGCAAAGT
 
. : . : . : . : . : . :
JMFF009N12- GTCGAGTCGGGAGCCCCTATAGATATCACATCTTCGTTAAAAAGTTACGAGAAAGAGAGA
JMFF017L03- GTCGAGTCGGGAGCCCCTATAGATATCACATCTTCGTTAAAAAGTTACGAGAAAGAGAGA
                      ____________________________________________________________
consensus GTCGAGTCGGGAGCCCCTATAGATATCACATCTTCGTTAAAAAGTTACGAGAAAGAGAGA
 
. : . : . : . : . : . :
JMFF009N12- AGACTGAGAGTCGGAATCATCCACGGGCTGGCCCGAATGGCTGCATTGATGGCAGCAACT
JMFF017L03- AGACTGAGAGTCGGAATCATCCACGGGCTGGCCCGAATGGCTGCATTGATGGCAGCAACT
JMSF049D03- GCTGGCCCGAATGGCTGCATTGATGGCAGCAACT
                      ____________________________________________________________
consensus AGACTGAGAGTCGGAATCATCCACGGGCTGGCCCGAATGGCTGCATTGATGGCAGCAACT
 
. : . : . : . : . : . :
JMFF009N12- TATAAGGCATATTTAGGCGTAGGACTCGGTCCATTATCGTTCTTAACCCAATTTAGGATA
JMFF017L03- TATAAGGCATATTTAGGCGTAGGACTCGGTCCATTATCGTTCTTAACCCAATTTAGGATA
JMSF049D03- TATAAGGCATATTTAGGCGTAGGACTCGGTCCATTATCGTTCTTAACCCAATTTAGGATA
rJMSF049D03+ TAGGATA
rJMFF009N12+ TAACCCAATTTAGGATA
                      ____________________________________________________________
consensus TATAAGGCATATTTAGGCGTAGGACTCGGTCCATTATCGTTCTTAACCCAATTTAGGATA
 
. : . : . : . : . : . :
JMFF009N12- CCACATCCCGGAAGAGTTGGTGGGAGATTTTTTATAGACCTCGCGATGCCTTTAATGCTT
JMFF017L03- CCACATCCCGGAAGAGTTGGTGGGAGATTTTTTATAGACCTCGCGATGCCTTTAATGCTT
JMSF049D03- CCACATCCCGGAAGAGTTGGTGGGAGATTTTTTATAGACCTCGCGATGCCTTTAATGCTT
rJMSF049D03+ CCACATCCCGGAAGAGTTGGTGGGAGATTTTTTATAGACCTCGCGATGCCTTTAATGCTT
rJMFF009N12+ CCACATCCCGGAAGAGTTGGTGGGAGATTTTTTATAGACCTCGCGATGCCTTTAATGCTT
rJMFF017L03+ AGAGTTGGTGGGAGATTTTTTATAGACCTCGCGATGCCTTTAATGCTT
                      ____________________________________________________________
consensus CCACATCCCGGAAGAGTTGGTGGGAGATTTTTTATAGACCTCGCGATGCCTTTAATGCTT
 
. : . : . : . : . : . :
JMFF009N12- AGTTGGGTCCTAGGAGGCAATGGAGAAAAACTTGAAGGCAGGCCGAAGCAGTGCAGATTG
JMFF017L03- AGTTGGGTCCTAGGAGGCAATGGAGAAAAACTTGAAGGCAGGCCGAAGCAGTGCAGATTG
JMSF049D03- AGTTGGGTCCTAGGAGGCAATGGAGAAAAACTTGAAGGCAGGCCGAAGCAGTGCAGATTG
rJMSF049D03+ AGTTGGGTCCTAGGAGGCAATGGAGAAAAACTTGAAGGCAGGCCGAAGCAGTGCAGATTG
rJMFF009N12+ AGTTGGGTCCTAGGAGGCAATGGAGAAAAACTTGAAGGCAGGCCGAAGCAGTGCAGATTG
rJMFF017L03+ AGTTGGGTCCTAGGAGGCAATGGAGAAAAACTTGAAGGCAGGCCGAAGCAGTGCAGATTG
                      ____________________________________________________________
consensus AGTTGGGTCCTAGGAGGCAATGGAGAAAAACTTGAAGGCAGGCCGAAGCAGTGCAGATTG
 
. : . : . : . : . : . :
JMFF009N12- TCTGATAAGGCTAATGATCAGCTGCGGAAATGGTTTGACGATGACGATGCATTGGAGCGT
JMFF017L03- TCTGATAAGGCTAATGATCAGCTGCGGAAATGGTTTGACGATGACGATGCATTGGAGCGT
JMSF049D03- TCTGATAAGGCTAATGATCAGCTGCGGAAATGGTTTGACGATGACGATGCATTGGAGCGT
rJMSF049D03+ TCTGATAAGGCTAATGATCAGCTGCGGAAATGGTTTGACGATGACGATGCATTGGAGCGT
rJMFF009N12+ TCTGATAAGGCTAATGATCAGCTGCGGAAATGGTTTGACGATGACGATGCATTGGAGCGT
rJMFF035E12+ AAATGGTTTGACGATGACGATGCATTGGAGCGT
rJMFF017L03+ TCTGATAAGGCTAATGATCAGCTGCGGAAATGGTTTGACGATGACGATGCATTGGAGCGT
                      ____________________________________________________________
consensus TCTGATAAGGCTAATGATCAGCTGCGGAAATGGTTTGACGATGACGATGCATTGGAGCGT
 
. : . : . : . : . : . :
JMFF009N12- GCCATGAATGGAGAATGGTTTTTATCTCCACTCAAGAATGCAACAAGTACTGCTTCAGAA
JMFF017L03- GCCATGAATGGAGAATGGTTTTTATCTCCACTCAAGAATGCAACAAGTACTGCTTCAGAA
JMSF049D03- GCCATGAATGGAGAATGGTTTTTATCTCCACTCAAGAATGCAACAAGTACTGCTTCAGAA
rJMSF049D03+ GCCATGAATGGAGAATGGTTTTTATCTCCACTCAAGAATGCAACAAGTACTGCTTCAGAA
rJMFF009N12+ GCCATGAATGGAGAATGGTTTTTATCTCCACTCAAGAATGCAACAAGTACTGCTTCAGAA
rJMFF035E12+ GCCATGAATGGAGAATGGTTTTTATCTCCACTCAAGAATGCAACAAGTACTGCTTCAGAA
rJMFF017L03+ GCCATGAATGGAGAATGGTTTTTATCTCCACTCAAGAATGCAACAAGTACTGCTTCAGAA
rJMFF041L08+ AA
                      ____________________________________________________________
consensus GCCATGAATGGAGAATGGTTTTTATCTCCACTCAAGAATGCAACAAGTACTGCTTCAGAA
 
. : . : . : . : . : . :
JMFF009N12- CCCATTTTGTTACGCAGAG
JMFF017L03- CCCATTTTGTTACGCAGAGACGAAAAAACGCC
JMSF049D03- CCCATTTTGTTACGCAGAGACGAAAAAACGCCCTGCATAGTTGGGTCTGTGCCACATCCA
rJMSF049D03+ CCCATTTTGTTACGCAGAGACGAAAAAACGCCCTGCATAGTTGGGTCTGTGCCACATCCA
rJMFF009N12+ CCCATTTTGTTACGCAGAGACGAAAAAACGCCCTGCATAGTTGGGTCTGTGCCACATCCA
rJMFF035E12+ CCCATTTTGTTACGCAGAGACGAAAAAACGCCCTGCATAGTTGGGTCTGTGCCACATCCA
rJMFF017L03+ CCCATTTTGTTACGCAGAGACGAAAAAACGCCCTGCATAGTTGGGTCTGTGCCACATCCA
rJMFF041L08+ CCCATTTTGTTACGCAGAGACGAAAAAACGCCCTGCATAGTTGGGTTTGTGCCACATCCA
                      ____________________________________________________________
consensus CCCATTTTGTTACGCAGAGACGAAAAAACGCCCTGCATAGTTGGGTCTGTGCCACATCCA
 
. : . : . : . : . : . :
JMSF049D03- AACTTCCCGGGAACATCAGTAGTCGTGTCTTCACCCGAGGTGTCCGAACTGCATGCTCGA
rJMSF049D03+ AACTTCCCGGGAACATCAGTAGTCGTGTCTTCACCCGAGGTGTCCGAACTGCATGCTCGA
rJMFF009N12+ AACTTCCCGGGAACATCAGTAGTCGTGTCTTCACCCGAGGTGTCCGAACTGCATGCTCGA
rJMFF035E12+ AACTTCCCGGGAACATCAGTAGTCGTGTCTTCACCCGAGGTGTCCGAACTGCATGCTCGA
rJMFF017L03+ AACTTCCCGGGAACATCAGTAGTCGTGTCTTCACCCGAGGTGTCCGAACTGCATGCTCGA
rJMFF041L08+ AACTTCCCGGGAACATCAGTAGTGGTGTCTTCACCCGAGGTGTCCGAACTGCATGCTCGA
                      ____________________________________________________________
consensus AACTTCCCGGGAACATCAGTAGTCGTGTCTTCACCCGAGGTGTCCGAACTGCATGCTCGA
 
. : . : . : . : . : . :
JMSF049D03- ATAAGCTATAAAGATGGCGCTTTCTTCGTGACTGATTTGCGTAGTAAACATGGTACTTGG
rJMSF049D03+ ATAAGCTATAAAGATGGCGCTTTCTTCGTGACTGATTTGCGTAGTAAACATGGTACTTGG
rJMFF009N12+ ATAAGCTATAAAGATGGCGCTTTCTTCGTGACTGATTTGCGTAGTAAACATGGTACTTGG
rJMFF035E12+ ATAAGCTATAAAGATGGCGCTTTCTTCGTGACTGATTTGCGTAGTAAACATGGTACTTGG
rJMFF017L03+ ATAAGCTATAAAGATGGCGCTTTCTTCGTGACTGATTTGCGTAGTAAACATGGTACTTGG
rJMFF041L08+ ATAAGCTATAAAAATGGCGCTTTTTTCGTGACTGATTTGGGTAGTAAACATGGTACTTGG
                      ____________________________________________________________
consensus ATAAGCTATAAAGATGGCGCTTTCTTCGTGACTGATTTGCGTAGTAAACATGGTACTTGG
 
. : . : . : . : . : . :
JMSF049D03- ATCACCGACNACGAGGGCAGACGCTATCGGGTGTCCCCGAACTTTCCAACCCGTTTTCAT
rJMSF049D03+ ATCACCGACAACGAGGGCAGACGCTATCGGGTGTCCCCGAACTTTCCAACCCGTTTTCAT
rJMFF009N12+ ATCACCGACAACGAGGGCAGGCGCTATCGGGTGTCCCCGAACTTTCCAACCCGTTTTCAT
rJMFF035E12+ ATCACCGACAACGAGGGCAGGCGCTATCGGGTGTCCCCGAACTTTCCAACCCGTTTTCAT
rJMFF017L03+ ATCACCGACAACGAGGGCAGGCGCTATCGGGTGTCCCCGAACTTTCCAACCCGTTTTCAT
rJMFF041L08+ ATCCCCGACAACGAGGGCAGGCGCTATCGGGGGTCCCCGAACTTTCCAACCCGTTTTCAT
                      ____________________________________________________________
consensus ATCACCGACAACGAGGGCAGGCGCTATCGGGTGTCCCCGAACTTTCCAACCCGTTTTCAT
 
. : . : . : . : . : . :
JMSF049D03- CCTTCAGACATCGTCGAATTCGGGTCTGATCGCAAGGCGGCCTTCC
rJMSF049D03+ CCTTCAGACATCGTCGAATTCGGGTCTGATCGCAAGGCGGCCTTCCACGTGAAGGTGAAG
rJMFF009N12+ CCTTCAGACATCGTCGAATTCGGGTCTGATCGCAAGGCGGCCTTCCACGTGAAGGTGAAG
rJMFF035E12+ CCTTCAGACATCGTCGAATTCGGGTCTGATCGCAAGGCGGCCTTCCACGTGAAGGTGAAG
rJMFF017L03+ CCTTCAGACATCGTCGAATTCGGGTCTGATCGCAAGGCGGCNTTCCACGTGAAGGTGAAG
rJMFF041L08+ CCTTCAGACATCGTGGAATTCGGGTTTGATCGCAAGGCGGCCTTCCACGTGAAGGTGAAG
                      ____________________________________________________________
consensus CCTTCAGACATCGTCGAATTCGGGTCTGATCGCAAGGCGGCCTTCCACGTGAAGGTGAAG
 
. : . : . : . : . : . :
rJMSF049D03+ GTGATGAAATTTCCGCCATTTTCCGGCGGGAAGGGAGAGATGGAAGTTTTGCAGGCAGCG
rJMFF009N12+ GTGATGAAATTTCCGCCATTTTCCGGCGGGAAGGGAGAGATGGAAGTTTTGCAGGCAGCG
rJMFF035E12+ GTGATGAAATTTCCGCCATTTTCCGGCGGGAAGGGAGAGATGGAAGTTTTGCAGGCAGCG
rJMFF017L03+ GTGATGAAATTTCCGCCATTTTCCGGCGGGAAGGGAGAGATGGAAGTTTTGCAGGCAGCG
rJMFF041L08+ GTGATGAAATTTCCGCCATTTTCCGGCGGGAAGGGAAAAATGGAAGTTTTGCAGGCAGGG
                      ____________________________________________________________
consensus GTGATGAAATTTCCGCCATTTTCCGGCGGGAAGGGAGAGATGGAAGTTTTGCAGGCAGCG
 
. : . : . : . : . : . :
rJMSF049D03+ TAGGCATTCTCAAGAAAACCGAATTGGTCTAATATGCGAAGAAACACATAGAAATTGTAC
rJMFF009N12+ TAGGCATTCTCAAGAAAACCGAATTGGTCTAATATGCGAAGAAACACATAGAAATTGTAC
rJMFF035E12+ TAGGCATTCTCAAGAAAACCGAATTGGTCTAATATGCGAAGAAACACATAGAAATTGTAC
rJMFF017L03+ TAGGCATTCTCAAGAAAACCGAATTGGTCTAATATGCGAAGAAACACATAGAAATTGTAC
rJMFF041L08+ TAGGCATTTTCAAAAAAACCGAATTGGTTTAATATGCGAAGAAACCCATAGAAATTGTAC
                      ____________________________________________________________
consensus TAGGCATTCTCAAGAAAACCGAATTGGTCTAATATGCGAAGAAACACATAGAAATTGTAC
 
. : . : . : . : . : . :
rJMSF049D03+ AGGATTTATCCATGGCAGCTGAGCCCTGTAAAGCTGCTGCATTTTGTACCATGTATAGAT
rJMFF009N12+ AGGATTTATCCATGGCAGCTGAGCCCTGTAAAGCTGCTGCATTTTGTACCATGTATAGAT
rJMFF035E12+ AGGATTTATCCATGGCAGCTGAGCCCTGTAAAGCTGCTGCATTTTGTACCATGTATAGAT
rJMFF017L03+ AGGATTTATCCATGGCAGCTGAGCCCTGTAAAGCTGCTGCATTTTGTACCATGTATAGAT
rJMFF041L08+ AGGATTTATCCATGGCAGCTGAGCCCTGTAAAGCTGCTGCATTTTGTACCATGTATAGAT
                      ____________________________________________________________
consensus AGGATTTATCCATGGCAGCTGAGCCCTGTAAAGCTGCTGCATTTTGTACCATGTATAGAT
 
. : . : . : . : . : . :
rJMFF009N12+ TTACTGTAATTCAGAACAAGAAATCACTAGAAATGCGAAAGTTA
rJMFF035E12+ TTACTGTAATTCAGAACAAGAAATCACTAGAAATGCGAAAGTTA
rJMFF017L03+ TTACTGTAATTCAGAACAAGAAATCACTAGAAATGCGAAAGTTA
rJMFF041L08+ TTACTGTAATTCAGAACAAGAAATCCCTAGAAATGCGAAAGTTATTACAACAGATTCCCT
                      ____________________________________________________________
consensus TTACTGTAATTCAGAACAAGAAATCACTAGAAATGCGAAAGTTATTACAACAGATTCCCT