| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011A01 | Sequence | 475 | 005973 (7) | ref|XP_007205270.1| | 6e-58 | hypothetical protein PRUPE_ppa006473mg [Prunus persica] ref|XP_007205271.1| hypo | 770 | 004080 (7) | emb|CDP15204.1| | 4e-113 | unnamed protein product [Coffea canephora] |
| JMFF017P10 | Sequence | 229 | 004080 (7) | gb|KDO66110.1| | 6e-44 | hypothetical protein CISIN_1g0141743mg, partial [Citrus sinensis] | |||||
| JMFF024N14 | Sequence | 496 | 005973 (7) | ref|XP_007205270.1| | 2e-59 | hypothetical protein PRUPE_ppa006473mg [Prunus persica] ref|XP_007205271.1| hypo | 743 | 004080 (7) | emb|CDP15204.1| | 6e-105 | unnamed protein product [Coffea canephora] |
| JMFF027E11 | Sequence | 573 | 005973 (7) | gb|KDO45354.1| | 3e-89 | hypothetical protein CISIN_1g015298mg [Citrus sinensis] | 716 | 004080 (7) | emb|CDP15204.1| | 1e-99 | unnamed protein product [Coffea canephora] |
| JMFF030B08 | Sequence | 346 | 005973 (7) | gb|KDO45355.1| | 4e-23 | hypothetical protein CISIN_1g015298mg [Citrus sinensis] | 684 | 004080 (7) | emb|CDP15204.1| | 1e-97 | unnamed protein product [Coffea canephora] |
| JMFF038C23 | Sequence | 616 | 005973 (7) | gb|KDO45354.1| | 6e-96 | hypothetical protein CISIN_1g015298mg [Citrus sinensis] | 697 | 004080 (7) | gb|AAW80932.1| | 4e-87 | putative protein kinase, partial [Astragalus membranaceus] |
| JMSF044E20 | Sequence | 785 | 021168 | ref|XP_009629200.1| | 4e-119 | PREDICTED: shaggy-related protein kinase NtK-1-like [Nicotiana tomentosiformis] | 767 | 004080 (7) | emb|CDP15204.1| | 1e-116 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF044E20+ CTCTAGGTATTATAGAGCTC
rJMFF011A01+ TATAGAGCTC
____________________________________________________________
consensus CTCTAGGTATTATAGAGCTC
. : . : . : . : . : . :
rJMSF044E20+ CAGAGCTTATTTTTGGAGCGACAGAGTACACTACCGCCATTGATGTCTGGTCTGCAGGTT
rJMFF024N14+ ACAGAGTACACTACCGCCATTGATGTCTGGTCTGCAGGTT
rJMFF011A01+ CAGAGCTTATTTTTGGAGCGACAGAGTACACTACCGCCATTGATGTCTGGTCTGCAGGTT
rJMFF030B08+ TCTGCAGGTT
rJMFF027E11+ GTCTGGTCTGCAGGTT
____________________________________________________________
consensus CAGAGCTTATTTTTGGAGCGACAGAGTACACTACCGCCATTGATGTCTGGTCTGCAGGTT
. : . : . : . : . : . :
rJMSF044E20+ GTGTCCTTGCTGAACTGCTTCTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
rJMFF017P10+ GGACAGACANTATTTCNTGGTGAAAGTGGAGTTGACC
rJMFF024N14+ GTGTCCTTGCTGAACTGCTTCTAGGACAGACACTATTTCNTGGTGAAAGTGGAGTTGACC
rJMFF011A01+ GTGTCCTTGCTGAACTGCTTCTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
rJMFF030B08+ GTGTCCTTGCTGAACTGCTTTTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
rJMFF027E11+ GTGTCCTTGCTGAACTGCTTTTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
rJMFF038C23+ CTAGGACAGACACTATTTCNTGGTGAAAGTGGAGTTGACC
____________________________________________________________
consensus GTGTCCTTGCTGAACTGCTTCTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
. : . : . : . : . : . :
rJMSF044E20+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF017P10+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCNTACCAGGGAAGAAATTAAATGCATGA
rJMFF024N14+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF011A01+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF030B08+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF027E11+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF038C23+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
____________________________________________________________
consensus AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
. : . : . : . : . : . :
rJMSF044E20+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF017P10+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF024N14+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF011A01+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF030B08+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF027E11+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF038C23+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
____________________________________________________________
consensus ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
. : . : . : . : . : . :
rJMSF044E20+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF017P10+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTGTAGGCTTCTGCAGTACTCTC
rJMFF024N14+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF011A01+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF030B08+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF027E11+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF038C23+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
____________________________________________________________
consensus TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
. : . : . : . : . : . :
rJMSF044E20+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF017P10+ CAAATTTACG
rJMFF024N14+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF011A01+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF030B08+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF027E11+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF038C23+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
____________________________________________________________
consensus CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
. : . : . : . : . : . :
rJMSF044E20+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF024N14+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF011A01+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF030B08+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF027E11+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF038C23+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
____________________________________________________________
consensus ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
. : . : . : . : . : . :
rJMSF044E20+ ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF024N14+ ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF011A01+ ACGAGTTGAAGGGTGTGCCAACGGAAACCA---TGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF030B08+ ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF027E11+ ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF038C23+ ACGAGTTGAAGGGTGTGCCAACGGAAACCA---TGAAATTGGTTCCTGAGCACGCGAGAA
____________________________________________________________
consensus ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
. : . : . : . : . : . :
rJMSF044E20+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGC---ACAGATAAATGATGAATCA
rJMFF024N14+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
rJMFF011A01+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
rJMFF030B08+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
rJMFF027E11+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
rJMFF038C23+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
____________________________________________________________
consensus AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
. : . : . : . : . : . :
rJMSF044E20+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF024N14+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF011A01+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF030B08+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF027E11+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF038C23+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
____________________________________________________________
consensus AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
. : . : . : . : . : . :
rJMSF044E20+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF024N14+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF011A01+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF030B08+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF027E11+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF038C23+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
____________________________________________________________
consensus GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
. : . : . : . : . : . :
rJMSF044E20+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF024N14+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF011A01+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF030B08+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF027E11+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF038C23+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
____________________________________________________________
consensus TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
. : . : . : . : . : . :
rJMSF044E20+ GGTTTAAGGAATTTGAATGTACTGT
rJMFF024N14+ GGTTTAAGGAATTTGAATGTACTGTTGAGATTGAA
rJMFF011A01+ GGTTTAAGGAATTTGAATGTACTATTGAGATTGAATGTCA
rJMFF030B08+ GGTTTAAGGAATT
rJMFF027E11+ GGTTTAAGGAATTTGAATGTACTGTTGAGATTGAATGTCA
rJMFF038C23+ GGTTTAAGGAATTTGAATGTACTATTGAGATTGAATGTCAAATGGTGGAATTNNAAACAA
____________________________________________________________
consensus GGTTTAAGGAATTTGAATGTACTGTTGAGATTGAATGTCAAATGGTGGAATTNNAAACAA