Contig 004079:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037P17Sequence585010640 (2)ref|XP_004243384.1|8e-28PREDICTED: NAC domain-containing protein 8 [Solanum lycopersicum]717004079 (2)ref|XP_009587632.1|83.6PREDICTED: NAC domain-containing protein 8-like [Nicotiana tomentosiformis]
JMSF016C14Sequence357010640 (2)714004079 (2)ref|XP_011047704.1|197PREDICTED: NAC domain-containing protein 8-like [Populus euphratica]

Alignment

This contig is upended


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rJMSF016C14+               TTATACGACCGGTACANGAAAGAGAAGGAAAGTGCACACGGACGTGGACGGGAAC
                      ____________________________________________________________
consensus                  TTATACGACCGGTACANGAAAGAGAAGGAAAGTGCACACGGACGTGGACGGGAAC
 
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rJMSF016C14+          GAAACCCGGTGGCACAAGACCGGGAAGACGAGGCCGGTGGCGGCGAAAGGCATGGTGAAA
                      ____________________________________________________________
consensus             GAAACCCGGTGGCACAAGACCGGGAAGACGAGGCCGGTGGCGGCGAAAGGCATGGTGAAA
 
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rJMSF016C14+          GGGTACAAGAAAATACTGGTGCTGTACACCAACTACGGGAAGCAAAGGAAACCCGAGAAA
                      ____________________________________________________________
consensus             GGGTACAAGAAAATACTGGTGCTGTACACCAACTACGGGAAGCAAAGGAAACCCGAGAAA
 
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rJMSF016C14+          NCCAACTGGGTGATGCACCAGTACCACCTGGGAGACGACGAGGACGAGAAAGAAGGCGAG
                      ____________________________________________________________
consensus             NCCAACTGGGTGATGCACCAGTACCACCTGGGAGACGACGAGGACGAGAAAGAAGGCGAG
 
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rJMSF016C14+          CTCGTGGTGTCAAAGGTTTTCTACCAAACACAACCTAGACAATGCGGTTCTCTCCTCAGG
rJMFF037P17+             GTGGTGTCAAAGGTTTTCTACCAAACACAACCTAGACAATGCGGTTCTCTCCTCAGG
                      ____________________________________________________________
consensus             CTCGTGGTGTCAAAGGTTTTCTACCAAACACAACCTAGACAATGCGGTTCTCTCCTCAGG
 
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rJMSF016C14+          GATTCTCCTCCTCTACTTCAGGCGGGGCCGCCCGCCGGACGAAAGCCCGGCTCTCATCTT
rJMFF037P17+          GATTCTCCTCCTCTACTTCAGGCGGGGCCGCCCGCCGGACGAAAGCCCGGCTCTCATCTT
                      ____________________________________________________________
consensus             GATTCTCCTCCTCTACTTCAGGCGGGGCCGCCCGCCGGACGAAAGCCCGGCTCTCATCTT
 
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rJMSF016C14+          AGGGAAGCTTCAACAATGGTGGAATCCTTCAACCCAACTCTCATCTCCTTCGATCAATTC
rJMFF037P17+          AGGGAAGCTTCAACAATGGTGGAATCCTTCAACCCAACTCTCATCTCCTTCGATCAATTC
                      ____________________________________________________________
consensus             AGGGAAGCTTCAACAATGGTGGAATCCTTCAACCCAACTCTCATCTCCTTCGATCAATTC
 
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rJMSF016C14+          GACCATAATCGTCCCACTTCTCGACTCCTCCCAACTTTCAACATGCATGACACTTCTTTC
rJMFF037P17+          GACCATAATCGTCCCACTTCTCGACTCCTCCCAACTTTCAACATGCATGACACTTCTTTC
                      ____________________________________________________________
consensus             GACCATAATCGTCCCACTTCTCGACTCCTCCCAACTTTCAACATGCATGACACTTCTTTC
 
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rJMSF016C14+          ATTCCTTAATTATTAGCTTACTTAATTTTAACTGTCTCTGATCTTTTCTTAAGGTCTTAA
rJMFF037P17+          ATTCCTTAATTATTAGCTTACTTAATTTTAACTGTCTCTGATCTTTTCTTAAGGTCTTAA
                      ____________________________________________________________
consensus             ATTCCTTAATTATTAGCTTACTTAATTTTAACTGTCTCTGATCTTTTCTTAAGGTCTTAA
 
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rJMSF016C14+          AATATATGTTGATGGGATAGATGATGATGATGAAGAAGTTAACTTGAAGCAGTTATGGTG
rJMFF037P17+          AATATATGTTGATGGGATAGATGATGATGATGAAGAAGTTAACTTGAAGCAGTTATGGTG
                      ____________________________________________________________
consensus             AATATATGTTGATGGGATAGATGATGATGATGAAGAAGTTAACTTGAAGCAGTTATGGTG
 
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rJMSF016C14+          GTGAATAAGTTAACTTACTGGGGTGGTTAGGGGGGGAAGAATAAGGGGGAGTGAGCAGAA
rJMFF037P17+          GTGAATAAGTTAACTTACTGGGGTGGTTAGGGGGGGAAGAATAAGGGGGAGTGAGCAGAA
                      ____________________________________________________________
consensus             GTGAATAAGTTAACTTACTGGGGTGGTTAGGGGGGGAAGAATAAGGGGGAGTGAGCAGAA
 
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rJMSF016C14+          TAAACTTCTGATTTAAGGTTGGAATTGAAGTTGAGGCTCAACCCTAATAGATCGAGTAA 
rJMFF037P17+          TAAACTTCTGATTTAAGGTTGGAATTGAAGTTGAGGCTCAACCCTAATAGATCGAGTAAT
                      ____________________________________________________________
consensus             TAAACTTCTGATTTAAGGTTGGAATTGAAGTTGAGGCTCAACCCTAATAGATCGAGTAAT
 
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rJMFF037P17+          TATGATATCTTAAACTTTCTGAAATGGAATTTTTTTTTAATTATAATGCATGTTTTAATT
                      ____________________________________________________________
consensus             TATGATATCTTAAACTTTCTGAAATGGAATTTTTTTTTAATTATAATGCATGTTTTAATT
 
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rJMFF037P17+          ACTTTGTACAGTAGTAATGCAGAAGTGGTTATGTACACGGCTCAGGATTTATGATCCATT
                      ____________________________________________________________
consensus             ACTTTGTACAGTAGTAATGCAGAAGTGGTTATGTACACGGCTCAGGATTTATGATCCATT
 
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rJMFF037P17+          GACTGGCAGAGTTATCATAAAAGATCAAGTTCAAGTGTACAAAGATACTCCAGATGATAT
                      ____________________________________________________________
consensus             GACTGGCAGAGTTATCATAAAAGATCAAGTTCAAGTGTACAAAGATACTCCAGATGATAT
 
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rJMFF037P17+          ATAACTTAATGTATTATTACTTTTAATGTTCGTTGTTTCATTTCTGGGTAACCATTATAT
                      ____________________________________________________________
consensus             ATAACTTAATGTATTATTACTTTTAATGTTCGTTGTTTCATTTCTGGGTAACCATTATAT