| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022D10 | Sequence | 586 | 004078 (7) | ref|XP_007049148.1| | 1e-99 | PHD finger family protein / bromo-adjacent (BAH) domain-containing protein isof | 734 | 004078 (7) | ref|XP_006357947.1| | 6e-93 | PREDICTED: BAH and coiled-coil domain-containing protein 1-like isoform X1 [Sol |
| JMFF037O08 | Sequence | 627 | 004078 (7) | ref|XP_006357947.1| | 2e-39 | PREDICTED: BAH and coiled-coil domain-containing protein 1-like isoform X1 [Sol | |||||
| JMFN036P23 | Sequence | 510 | 004078 (7) | ref|XP_006357947.1| | 1e-29 | PREDICTED: BAH and coiled-coil domain-containing protein 1-like isoform X1 [Sol | |||||
| JMSF009O07 | Sequence | 226 | 020991 | 729 | 004078 (7) | ref|XP_006357947.1| | 5e-130 | PREDICTED: BAH and coiled-coil domain-containing protein 1-like isoform X1 [Sol | |||
| JMSF046O04 | Sequence | 663 | 004078 (7) | gb|KDP30792.1| | 7e-126 | hypothetical protein JCGZ_13735 [Jatropha curcas] | 693 | 004078 (7) | ref|XP_006357947.1| | 2e-81 | PREDICTED: BAH and coiled-coil domain-containing protein 1-like isoform X1 [Sol |
This contig is upended
. : . : . : . : . : . :
JMFF022D10- AGTACACTCAGCTTCTTCTTCACTGTCCCCTGTATACGGACGGGCGAAACCCTCT
JMSF046O04- GGACGGGCGAAACCCTCT
____________________________________________________________
consensus AGTACACTCAGCTTCTTCTTCACTGTCCCCTGTATACGGACGGGCGAAACCCTCT
. : . : . : . : . : . :
JMFF022D10- CCTCCCTAACCTTCTCTCTCCCCATTTCTCCAGCTAGTGCTGAGACCGAGCTACTGCCCA
JMSF046O04- CCTCCCTAACCTTCTCTCTCCCCATTTCTCCAGCTAGTGCTGAGACCGAGCTACTGCCCA
____________________________________________________________
consensus CCTCCCTAACCTTCTCTCTCCCCATTTCTCCAGCTAGTGCTGAGACCGAGCTACTGCCCA
. : . : . : . : . : . :
JMFF022D10- GAAAGTGTAGGAGGTTTGATGGCGAAGACCAAACCCGGGAAGAAGGATCTCGATTCGTAC
JMSF046O04- GAAAGTGTAGGAGGTTTGATGGCGAAGACCAAACCCGGGAAGAAGGATCTCGATTCGTAC
____________________________________________________________
consensus GAAAGTGTAGGAGGTTTGATGGCGAAGACCAAACCCGGGAAGAAGGATCTCGATTCGTAC
. : . : . : . : . : . :
JMFF022D10- ACAATCAAGGGCACCAACAAAGTCGTCAGGCCCGGTGATTGTGTCTTAATGAGACCATCA
JMSF046O04- ACAATCAAGGGCACCAACAAAGTCGTCAGGCCCGGTGATTGTGTCTTAATGAGACCATCA
rJMSF009O07+ GATTGTGTACTAATGAGACCGGCA
____________________________________________________________
consensus ACAATCAAGGGCACCAACAAAGTCGTCAGGCCCGGTGATTGTGTCTTAATGAGACCATCA
. : . : . : . : . : . :
JMFF022D10- GATTCAAATAATCTCCCATACGTGGCAAGAGTTGAGAAGTTTGAAGCTGACCACCGGAAC
JMSF046O04- GATTCAAATAATCTCCCATACGTGGCAAGAGTTGAGAAGTTTGAAGCTGACCACCGGAAC
rJMSF009O07+ GATACTAATAAGCCCCCATATGTGGCGAGAGTTGAGAAGATAGAAGCTGATCACCGGAAC
rJMFF022D10+ ACCGGANC
____________________________________________________________
consensus GATTCAAATAATCTCCCATACGTGGCAAGAGTTGAGAAGTTTGAAGCTGACCACCGGAAC
. : . : . : . : . : . :
JMFF022D10- AATGTGAAGGTACGAGTGCGGTGGTATTACCGACCTGAGGAATC-AAAGGGTGGCCGCAG
JMSF046O04- AATGTGAAGGTACGAGTGCGGTGGTATTACCGACCTGAGGAATC-AAAGGGTGGCCGCAG
rJMSF009O07+ AATGTGAAAGTGCGAGTGCGATGGTACTATCGCCCTGAGGAGTC-CATGGGTGGCCGCAG
rJMSF046O04+ TACGAGTGCGGTGGTATTACCGACCTGAGGAATCAAAAGGGTGGCCGCAG
rJMFF022D10+ AATGTGAAGGTACGAGTGCGGTGGTATTACCGACNTGAGGAATC-AAAGGGTGGCCGCAG
____________________________________________________________
consensus AATGTGAAGGTACGAGTGCGGTGGTATTACCGACCTGAGGAATC-AAAGGGTGGCCGCAG
. : . : . : . : . : . :
JMFF022D10- ACAGTTTCATGGGGCCAAGGAACTATTCTTGTCAGACCACTATGATATACAAAGTGCACA
JMSF046O04- ACAGTTTCATGGGGCCAAGGAACTATTCTTGTCAGACCACTATGATATACAAAGTGCACA
rJMSF009O07+ ACAGTTTCATGGGGCCAAGGAGCTATTTCTATCAGACCACTATGATATACAGAGTGCACA
rJMSF046O04+ ACAGTTTCATGGGGCCAAGGAACTATTCTTGTCAGACCACTATGATATACAAAGTGCACA
rJMFF022D10+ ACAGTTTCATGGGGCCAAGGAACTATTCTTGTCAGACCACTATGATATACAAAGTGCACA
____________________________________________________________
consensus ACAGTTTCATGGGGCCAAGGAACTATTCTTGTCAGACCACTATGATATACAAAGTGCACA
. : . : . : . : . : . :
JMFF022D10- AACAATTGAAGGAAAGTGCATTGTGCATTCTTTTAAGAACTATACCAAGCTGGATAATGT
JMSF046O04- AACAATTGAAGGAAAGTGCATTGTGCATTCTTTTAAGAACTATACCAAGCTGGATAATGT
rJMSF009O07+ CACAATTGAAGGATAGTGCATAGTGCATTCTTTCAAGAACTATACAAAGCTTGAGAATGT
rJMSF046O04+ AACAATTGAAGGAAAGTGCATTGTGCATTCTTTTAAGAACTATACCAAGCTGGATAATGT
rJMFF022D10+ AACAATTGAAGGAAAGTGCATTGTGCATTCTTTTAAGAACTATACCAAGCTGGATAATGT
rJMFF037O08+ TTAAGAANTANACCAAGCTGGATAATGT
____________________________________________________________
consensus AACAATTGAAGGAAAGTGCATTGTGCATTCTTTTAAGAACTATACCAAGCTGGATAATGT
. : . : . : . : . : . :
JMFF022D10- GGGCGCTGAGGATTACTTCAGTCGATTTGAGTACAAAACTGCCACTGGAGGGTTTACTCC
JMSF046O04- GGGCGCTGAGGATTACTTCAGTCGATTTGAGTACAAAACTGCCACTGGAGGGTTTACTCC
rJMSF009O07+ TGGCCCGGAGGACTACTTCTGTAGGTTTGAGTACAAAGCTGCTACTGGAGGGTTCACTCC
rJMSF046O04+ GGGCGCTGAGGATTACTTCAGTCGATTTGAGTACAAAACTGCCACTGGAGGGTTTACTCC
rJMFF022D10+ GGGCGCTGAGGATTACTTCAGTCGATTTGAGTACAAAACTGCCACTGGAGGGTTTACTCC
rJMFF037O08+ GGGCGNTGAGGATTACTTCAGTCGATTTGAGTACAAAACNGCCNNTGGAGGGTTTNCTCC
____________________________________________________________
consensus GGGCGCTGAGGATTACTTCAGTCGATTTGAGTACAAAACTGCCACTGGAGGGTTTACTCC
. : . : . : . : . : . :
JMFF022D10- TGACCGTGTTGCTGTGTATTGCAAGTGTGAGATGCCCTATAATCCTGATGAT
JMSF046O04- TGACCGTGTTGCTGTGTATTGCAAGTGTGAGATGCCCTATAATCCTGATGATCTCATGGT
rJMSF009O07+ TGACCGTGTAGCTGTGTATTGCAAGTGTGAGATGCCGTATAACCCTGATGATCTCATGGT
rJMSF046O04+ TGACCGTGTTGCTGTGTATTGCAAGTGTGAGATGCCCTATAATCCTGATGATCTCATGGT
rJMFF022D10+ TGACCGTGTTGCTGTGTATTGCAAGTGTGAGATGCCCTATAATCCTGATGATCTCATGGT
JMFN036P23- TGCAAGTGTGAGATGCCCTATAATCCTGATGATCTCATGGT
rJMFF037O08+ TGACCGTGTTGCTGTGTATTGCAAGTGTGAGANGCCNTATNATCNTGATGATNTCATGNT
____________________________________________________________
consensus TGACCGTGTTGCTGTGTATTGCAAGTGTGAGATGCCCTATAATCCTGATGATCTCATGGT
. : . : . : . : . : . :
JMSF046O04- TCAGTGTGAAGGATGCACAGATTGGTTTCATCCTTCCTGTATGGGGATGACCATTGATGA
rJMSF009O07+ ACAATGTGATGGATGCAAGGATTGGTTTCATCCCTCCTGTATGGGTATGACAATTGATGA
rJMSF046O04+ TCAGTGTGAAGGATGCACAGATTGGTTTCATCCTTCCTGTATGGGGATGACCATTGATGA
rJMFF022D10+ TCAGTGTGAAGGATGCACAGATTGGTTTCATCCTTCCTGTATGGGGATGACCATTGATGA
JMFN036P23- TCAGTGTGAAGGATGCACAGATTGGTTTCATCCTTCCTGTATGGGGATGACCATTGATGA
rJMFF037O08+ TCAGTGTGAAGGATGCACAGATTGGTTTCATCCTTCCNGTANGGGGATNACCATTGATGA
____________________________________________________________
consensus TCAGTGTGAAGGATGCACAGATTGGTTTCATCCTTCCTGTATGGGGATGACCATTGATGA
. : . : . : . : . : . :
JMSF046O04- AATAAAGAAGTTAGAGCATTTTGTGTGTTCAGACTGCTCAGGT
rJMSF009O07+ AGCAAAAAAATTAGAGCATTTCTTGTGTTCAGAATGTTCAGCTGAGGACGAGGCTAA
rJMSF046O04+ AATAAAGAAGTTAGAGCATTTTGTGTGTTCAGACTGCTCAGGTGAAGAGGAGGCTAAAGT
rJMFF022D10+ AATAAAGAAGTTAGAGCATTTTGTGTGTTCAGACTGCTCAGGTGAAGAGGAGGCTAAAGT
JMFN036P23- AATAAAGAAGTTAGAGCATTTTGTGTGTTCAGACTGCTCAGGTGAAGAGGAGGCTAAAGT
rJMFF037O08+ AATAAAGAAGTTAGAGCATTTTGTGTGTTCAGACTNCTCAGGTGAAGAGGAGGNTAAAGT
____________________________________________________________
consensus AATAAAGAAGTTAGAGCATTTTGTGTGTTCAGACTGCTCAGGTGAAGAGGAGGCTAAAGT
. : . : . : . : . : . :
rJMSF046O04+ GCAAATGGACTCATTTCGTGTACCTCGGGAGGGGGAGACAAAGCGCCGAAAGAGAACTGG
rJMFF022D10+ GCAAATGGACTCATTTCGTGTACCTCGGGAGGGGGAGACAAAGCGCCGAAAGAGAACTGG
JMFN036P23- GCAAATGGACTCATTTCGTGTACCTCGGGAGGGGGAGACAAAGCGCCGAAAGAGAACTGG
rJMFF037O08+ GCAAATGGNCTCATTTCGTNTNCCTCGGGAGGGGGAGACAAAGCGCCGAAAGAGAACTGG
____________________________________________________________
consensus GCAAATGGACTCATTTCGTGTACCTCGGGAGGGGGAGACAAAGCGCCGAAAGAGAACTGG
. : . : . : . : . : . :
rJMSF046O04+ TTGAGCTTTGTGCAGCGGTGGGGGTGCCGGGAGGGAAGGTTTTTCTCTTGGCCAAAGCTC
rJMFF022D10+ TTGAGCTTTGTGCAGCGGTGGGGGTGCCGGGAGGGAAGGTTTTTCTCTTGGCCAAAGCTC
JMFN036P23- TTGAGCTTTGTGCAGCGGTGGGGGTGCCGGGAGGGAAGGTTTTTCTCTTGGCCAAAGCTC
rJMFF037O08+ TTGAGCTTTNTGCAGCGGTGGGGGTGCCGGGAGGGAAGGTTTTTCTCTTGGCCAAAGNTC
____________________________________________________________
consensus TTGAGCTTTGTGCAGCGGTGGGGGTGCCGGGAGGGAAGGTTTTTCTCTTGGCCAAAGCTC
. : . : . : . : . : . :
rJMSF046O04+ AGCATTGTTGTTGTGTTGTAAAATTGTACAGTGCTGATGATGCTGAGCTTTTCAACCAAC
rJMFF022D10+ AGCATTGTTGTTGTGTTGTAAAATTGTACAGTGCTGATGATGCTGAGCTTTTCAACCAAC
JMFN036P23- AGCATTGTTGTTGTGTTGTAAAATTGTACAGTGCTGATGATGCTGAGCTTTTCAACCAAC
rJMFF037O08+ AGCATTGTTGTTGTGTTGTAAAATTNTACAGTGNTGATGATGNTGAGCTTTTCAACCAAN
____________________________________________________________
consensus AGCATTGTTGTTGTGTTGTAAAATTGTACAGTGCTGATGATGCTGAGCTTTTCAACCAAC
. : . : . : . : . : . :
rJMSF046O04+ TAGTAACTATTGCTTAATTTTGTGTACTAGTTTTGTAATTATGTATGTTATGTGTGTACT
rJMFF022D10+ TAGTAACTATTGCTTAATTTTGTGTACTAGTTTTGTAATTATGTATGTTATGTGTGTACT
JMFN036P23- TAGTAACTATTGCTTAATTTTGTGTACTAGTTTTGTAATTATGTATGTTATGTGTGTACT
rJMFF037O08+ TAGTAACTATTGNNTAATTTTGTGTANTAGTTTNGTAATTANGTATNTTATGTGTGTACT
____________________________________________________________
consensus TAGTAACTATTGCTTAATTTTGTGTACTAGTTTTGTAATTATGTATGTTATGTGTGTACT
. : . : . : . : . : . :
rJMSF046O04+ AGACTGAGAATGGTAGCAAACTGATAAACTCCAGTTCTC
rJMFF022D10+ AGACTGAG-ATGGTAGCAAACTGATAAACTCCAGTTCTCTGCCATGTTGTGACCTAAAAA
JMFN036P23- AGACTGAG-ATGGTAGCAAACTGATAAACTCCAGTTCTCTGCCATGTTGTGACCTAAAAA
rJMFF037O08+ AGANTGAG-ATGGTAGCAAANTGATAAACTCCAGTTCTCNGCCATGTTGCGACCTAAAAA
____________________________________________________________
consensus AGACTGAG-ATGGTAGCAAACTGATAAACTCCAGTTCTCTGCCATGTTGTGACCTAAAAA
. : . : . : . : . : . :
rJMFF022D10+ GGATAATA
JMFN036P23- GGATAATATAATAGCTGGAGACTTTAGAATCCATTTCAAAATAAATTTTT
rJMFF037O08+ GGATAATATAATAGCTGGAGACTNTAGAATCCATTTCAAAATAAATTTTTAAAAAAAATG
____________________________________________________________
consensus GGATAATATAATAGCTGGAGACTTTAGAATCCATTTCAAAATAAATTTTTAAAAAAAATG