Contig 004076:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007P14Sequence555006281 (23)ref|XP_009587222.1|9e-36PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico724004076 (10)ref|XP_009594768.1|4e-95PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico
JMFF011M06Sequence579006281 (23)ref|XP_004249277.1|3e-58PREDICTED: extended synaptotagmin-1-like [Solanum lycopersicum]685004076 (10)ref|XP_009594768.1|5e-93PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico
JMFF014F04Sequence513006281 (23)ref|XP_004249277.1|2e-58PREDICTED: extended synaptotagmin-1-like [Solanum lycopersicum]701004076 (10)ref|XP_009594768.1|6e-97PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico
JMFF019K22Sequence593006281 (23)ref|XP_009587222.1|1e-45PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico722004076 (10)ref|XP_009594768.1|4e-95PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico
JMFF036K05Sequence575006281 (23)ref|XP_009587222.1|2e-41PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico715004076 (10)ref|XP_009594768.1|7e-93PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico
JMFN018K02Sequence606004076 (10)ref|XP_009594768.1|8e-84PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico
JMSF016E03Sequence660004076 (10)ref|XP_009594768.1|1e-103PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico
JMSF034O05Sequence553004076 (10)ref|XP_009594768.1|3e-93PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico
JMSF036N12Sequence190006281 (23)503004076 (10)ref|XP_009614150.1|3e-104PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico
JMSF044D18Sequence505004076 (10)ref|XP_009594768.1|2e-93PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Nico

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016E03+                              TATGCAATTGGAAAACCCGATCACGACTGTTNTGATTCAC
                      ____________________________________________________________
consensus                                 TATGCAATTGGAAAACCCGATCACGACTGTTNTGATTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036N12+                            GTTCTTTATCCCGAACTTATCCTTCCCACCGTATTCCTGTAT
rJMSF016E03+          ATCTTGTTCCTGATTCTGGTTCTTTATCCCGAACTTATCCTTCCCACCGTATTCCTGTAT
rJMFF014F04+                                                       ACCGTATTCCTGTAT
rJMFF019K22+                                                                   TAT
rJMFF007P14+                                                                  GTAT
                      ____________________________________________________________
consensus             ATCTTGTTCCTGATTCTGGTTCTTTATCCCGAACTTATCCTTCCCACCGTATTCCTGTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036N12+          CTCTTTTTGATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
rJMSF016E03+          CTCTTTTTGATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
rJMFF014F04+          CTCTTTTTGATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
JMFN018K02-                                                   GGAATCCTCCTCACATGGAC
rJMSF034O05+                  GATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
rJMSF044D18+                 TGATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
rJMFF019K22+          CTCTTTTTGATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
rJMFF011M06+            CTTTTTGATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
rJMFF007P14+          CTCTTTTTGATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
rJMFF036K05+               TTTGATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
                      ____________________________________________________________
consensus             CTCTTTTTGATTGGAATCTGGTACTATCGATGGAGGCCGAGGAATCCTCCTCACATGGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036N12+          ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGATACC
rJMSF016E03+          ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGATACC
rJMFF014F04+          ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGGTACC
JMFN018K02-           ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGATACC
rJMSF034O05+          ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGATACC
rJMSF044D18+          ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGATACC
rJMFF019K22+          ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGATACC
rJMFF011M06+          ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGGTACC
rJMFF007P14+          ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGATACC
rJMFF036K05+          ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGATACC
                      ____________________________________________________________
consensus             ACCCGTATCTCGTGTGCTGACAATGCCCATCCCGATGAACTCGACGAGGAGTTCGATACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036N12+          TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
rJMSF016E03+          TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
rJMFF014F04+          TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
JMFN018K02-           TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
rJMSF034O05+          TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
rJMSF044D18+          TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
rJMFF019K22+          TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
rJMFF011M06+          TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
rJMFF007P14+          TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
rJMFF036K05+          TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
                      ____________________________________________________________
consensus             TTCCCGACTTCACGTCCCCCCGACGTTGTGAGGATGAGATACGACCGCCTTAGAAGCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036N12+          GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
rJMSF016E03+          GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
rJMFF014F04+          GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
JMFN018K02-           GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
rJMSF034O05+          GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
rJMSF044D18+          GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
rJMFF019K22+          GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
rJMFF011M06+          GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
rJMFF007P14+          GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
rJMFF036K05+          GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
                      ____________________________________________________________
consensus             GCGGGAAGGATTCAAACTGTGGTTGGCGATTTAGCTACTCAAGGAGAGAGGCTGCAGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036N12+          CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
rJMSF016E03+          CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
rJMFF014F04+          CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
JMFN018K02-           CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
rJMSF034O05+          CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
rJMSF044D18+          CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
rJMFF019K22+          CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
rJMFF011M06+          CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
rJMFF007P14+          CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
rJMFF036K05+          CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
                      ____________________________________________________________
consensus             CTACTGAGCTGGAGAGACCCGAGAGCCACCGCACTTTTCGTGATTTTCTGTCTGGTGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036N12+          GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
rJMSF016E03+          GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
rJMFF014F04+          GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
JMFN018K02-           GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
rJMSF034O05+          GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
rJMSF044D18+          GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
rJMFF019K22+          GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
rJMFF011M06+          GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
rJMFF007P14+          GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
rJMFF036K05+          GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
                      ____________________________________________________________
consensus             GCCATAGTCCTCTACGTCACGCCATTCCAAGTCGTTGCCCTTCTTGCTGGATTCTACATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036N12+          TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
rJMSF016E03+          TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
rJMFF014F04+          TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
JMFN018K02-           TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
rJMSF034O05+          TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
rJMSF044D18+          TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
rJMFF019K22+          TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
rJMFF011M06+          TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
rJMFF007P14+          TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
rJMFF036K05+          TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
                      ____________________________________________________________
consensus             TTGAGGCACCCGAGGTTTCGCCACAAGCTCCCCTCTGTGCCTCTCAACTTCTTCAGAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF036N12+          CTACCAGCCAGAACAGACTGC                                       
rJMSF016E03+          CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
rJMFF014F04+          CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
JMFN018K02-           CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
rJMSF034O05+          CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
rJMSF044D18+          CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
rJMFF019K22+          CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
rJMFF011M06+          CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
rJMFF007P14+          CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
rJMFF036K05+          CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
                      ____________________________________________________________
consensus             CTACCAGCCAGAACAGACTGCATGCTGTGATCGAGCAATGATAGATTTTGGTCGCCTCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016E03+          CTTTACCTTCTCGTTTGTTCATCGCTTTCTGTCCATGGAGATGTGAAGACCCGAGGCTCG
rJMFF014F04+          CTTTACCTTCTCGTTTGTTCATCGCTTTCTGTCCATGGAGATGTGAAGACCCGAGGCTCG
JMFN018K02-           CTTTACCTTCTCGTTTGTTCATCGCTTTCTGTCCATGGAGATGTGAAGACCCGAGGCTCG
rJMSF034O05+          CTTTACCTTCTCGTTTGTTCATCGCTTTCTGTCCATGGAGATGTGAAGACCCGAGGCTCG
rJMSF044D18+          CTTTACCTTCTCGTTTGTTCATCGCTTTCTGT                            
rJMFF019K22+          CTTTACCTTCTCGTTTGTTCATCGCTTTCTGTCCATGGAGATGTGAAGACCCGAGGCTCG
rJMFF011M06+          CTTTACCTTCTCGTTTGTTCATCGCTTTCTGTCCATGGAGATGTGAAGACCCGAGGCTCG
rJMFF007P14+          CTTTACCTTCTCGTTTGTTCATCGCTTTCTGTCCATGGAGATGTGAAGACCCGAGGCTCG
rJMFF036K05+          CTTTACCTTCTCGTTTGTTCATCGCTTTCTGTCCATGGAGATGTGAAGACCCGAGGCTCG
                      ____________________________________________________________
consensus             CTTTACCTTCTCGTTTGTTCATCGCTTTCTGTCCATGGAGATGTGAAGACCCGAGGCTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016E03+          GGTAGTGAACATTAGGTACT                                        
rJMFF014F04+          GGTAGTGAACATTGGGTACTGTTATGTGTGTAAAATCCCCAGCCCCTAAAGAACTACTAC
JMFN018K02-           GGTAGTGAACATTAGGTACTGTTATGTGTGTAAAATCCCCAGCCCCTAAAG-ACTACTAC
rJMSF034O05+          GGTAGTGAA                                                   
rJMFF019K22+          GGTAGTGAACATTAGGTACTGTTATGTGTGTAAAATCCCCAGCCCCTAAAGAACTACTAC
rJMFF011M06+          GGTAGTGAACATTGGGTACTGTTATGTGTGTAAAATCCCCAGCCCCTAAAGAACTACTAC
rJMFF007P14+          GGTAGTGAACATTAGGTACTGTTATGTGTGTAAAATCCCCAGCCCCTAAAGAACTACTAC
rJMFF036K05+          GGTAGTGAACATTAGGTACTGTTATGTGTGTAAAATCCCCAGCCCCTAAAGAACTACTAC
                      ____________________________________________________________
consensus             GGTAGTGAACATTAGGTACTGTTATGTGTGTAAAATCCCCAGCCCCTAAAGAACTACTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF014F04+          TAGTCTTGGGGATTTAATTGTTCATTAATTTTTATTGCCAATCCATGTTTATTTACAGTC
JMFN018K02-           TAGTCTTGGGGATTTAATTGTTCATTAATTTTTATTGCCCATCCATG             
rJMFF019K22+          TAGTCTTGGGGATTTAATTGTTCATTAATTTTTATTGCCAATCCATGTTTATTTACAGTC
rJMFF011M06+          TAGTCTTGGGGATTTAATTGTTCATTAATTTTTATTGCCAATCCATGTTTATTTACAGTC
rJMFF007P14+          TAGTCTTGGGGATTTAATTGTTCATTAATTTTTATTGCCAATCCATGTTTATTTACAGTC
rJMFF036K05+          TAGTCTTGGGGATTTAATTGTTCATTAATTTTTATTGCCAATCCATGTTTATTTACAGTC
                      ____________________________________________________________
consensus             TAGTCTTGGGGATTTAATTGTTCATTAATTTTTATTGCCAATCCATGTTTATTTACAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF014F04+          TTGTAAACGGTAATTTCTTTTGCTGG                                  
rJMFF019K22+          TTGTAAACGGTAATTTCTTTTGCTGGACCTTCTCCATGGTTAATTATTAAGTTCTATCT 
rJMFF011M06+          TTGTAAACGGTAATTTCTTTTGCTGGA                                 
rJMFF007P14+          TTGTAAACGGTAATTTCTTTTGCTGGACCTTCTCCATGGTTAATTATTAAGTTCTATCT 
rJMFF036K05+          TTGTAAACGGTAATTTCTTTTGCTGGACCTTCTCCATGGTTAATTATTAAGTTCTATCTA
                      ____________________________________________________________
consensus             TTGTAAACGGTAATTTCTTTTGCTGGACCTTCTCCATGGTTAATTATTAAGTTCTATCTA