Contig 004075:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036A19Sequence602003609 (2)ref|XP_006356119.1|51.6PREDICTED: uncharacterized protein LOC102593382 [Solanum tuberosum]743004075 (2)ref|XP_009614362.1|77.4PREDICTED: uncharacterized protein LOC104107298 [Nicotiana tomentosiformis]
JMSF013N10Sequence474003609 (2)721004075 (2)ref|XP_009614362.1|77.4PREDICTED: uncharacterized protein LOC104107298 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF013N10+                                                          TATCAGAAGGTG
rJMFF036A19+                                              AGAATGCTTCTGTATCAGAAGGTG
                      ____________________________________________________________
consensus                                                 AGAATGCTTCTGTATCAGAAGGTG
 
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rJMSF013N10+          TAGTGAAAATGGACTTGGTGAAAATGGAGGATGAAGCACACTTTGCGATTCAAGTAAATG
rJMFF036A19+          TAGTGAAAATGGACTTGGTGAAAATGGAGGATGAAGCACACTTTGCGATTCAAGTAAATG
                      ____________________________________________________________
consensus             TAGTGAAAATGGACTTGGTGAAAATGGAGGATGAAGCACACTTTGCGATTCAAGTAAATG
 
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rJMSF013N10+          GAGAGAAAGTAACTCAGTTACACGATGTTCCCAAAGTTTGTGCTAGTATTGGAGACGAGG
rJMFF036A19+          GAGAGAAAGTAACTCAGTTACACGATGTTCCCAAAGTTTGTGCTAGTATTGGAGACGAGG
                      ____________________________________________________________
consensus             GAGAGAAAGTAACTCAGTTACACGATGTTCCCAAAGTTTGTGCTAGTATTGGAGACGAGG
 
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rJMSF013N10+          GAGTAGGGGAAAAAGTGGGTGAAGCTATTCAGATATCCCGTGATATTGATGTGAAAGCAT
rJMFF036A19+          GAGTAGGGGAAAAAGTGGGTGAAGCTATTCAGATATCCCGTGATATTGATGTGAAAGCAT
                      ____________________________________________________________
consensus             GAGTAGGGGAAAAAGTGGGTGAAGCTATTCAGATATCCCGTGATATTGATGTGAAAGCAT
 
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rJMSF013N10+          CAGAACCAAGGGACTTTGCTACTATGGAAAAGAGCGATACGCTTACTCTATCTTACAATG
rJMFF036A19+          CAGAACCAAGGGACTTTGCTACTATGGAAAAGAGCGATACGCTTACTCTATCTTACAATG
                      ____________________________________________________________
consensus             CAGAACCAAGGGACTTTGCTACTATGGAAAAGAGCGATACGCTTACTCTATCTTACAATG
 
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rJMSF013N10+          CCCCCATAAGCATTGGAGATGATCCTGTTAAAGATTCTGAGCTTTCTGAGTGCTCTTATA
rJMFF036A19+          CCCCCATAAGCATTGGAGATGATCCTGTTAAAGATTCTGAGCTTTCTGAGTGCTCTTATA
                      ____________________________________________________________
consensus             CCCCCATAAGCATTGGAGATGATCCTGTTAAAGATTCTGAGCTTTCTGAGTGCTCTTATA
 
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rJMSF013N10+          ATCAGCATCAAGCTGGTTCAGCTCTACGACCAGTGCAAACAACATCTTTGAAGGGTTGCT
rJMFF036A19+          ATCAGCATCAAGCTGGTTCAGCTCTACGACCAGTGCAAACAACATCTTTGAAGGGTTGCT
                      ____________________________________________________________
consensus             ATCAGCATCAAGCTGGTTCAGCTCTACGACCAGTGCAAACAACATCTTTGAAGGGTTGCT
 
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rJMSF013N10+          GTGGCCTGTTTGAGTTGTTCACTGGATCCAATAGATAACTTCAGGAGAGCATGGAACGAG
rJMFF036A19+          GTGGCCTGTTTGAGTTGTTCACTGGATCCAATAGATAACTTCAGGAGAGCATGGAACGAG
                      ____________________________________________________________
consensus             GTGGCCTGTTTGAGTTGTTCACTGGATCCAATAGATAACTTCAGGAGAGCATGGAACGAG
 
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rJMSF013N10+          CTGAGTATATGTGCCAGAGAAGCATGCAGGGATTTGATGGTTCGTGATTCTTGTTGTTAA
rJMFF036A19+          CTGAGTATATGTGCCAGAGAAGCATGCAGGGATTTGATGGTTCGTGATTCTTGTTGTTAA
                      ____________________________________________________________
consensus             CTGAGTATATGTGCCAGAGAAGCATGCAGGGATTTGATGGTTCGTGATTCTTGTTGTTAA
 
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rJMSF013N10+          TGTCTAGAATACTCGTGGAAGAATAAATAGTAAGGCAATGTGTTATAGAAACTATTATAG
rJMFF036A19+          TGTCTAGAATACTCGTGGAAGAATAAATAGTAAGGCAATGTGTTATAGAAACTATTATAG
                      ____________________________________________________________
consensus             TGTCTAGAATACTCGTGGAAGAATAAATAGTAAGGCAATGTGTTATAGAAACTATTATAG
 
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rJMSF013N10+          CCAGTTTAAGTAATGTTACAGTGTTATTTTCTTGAAAAGCAGCTTGGAACTACTTGCTTC
rJMFF036A19+          CCAGTTTAAGTAATGTTACAGTGTTATTTTCTTGAAAAGCAGCTTGGAACTACTTGCTTC
                      ____________________________________________________________
consensus             CCAGTTTAAGTAATGTTACAGTGTTATTTTCTTGAAAAGCAGCTTGGAACTACTTGCTTC
 
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rJMSF013N10+          TGTGCTGCTTTCTAGGTATTTTGCAGCCAGTTAGCTTTCGATTAAGAATTTCGTGTTTAT
rJMFF036A19+          TGTGCTGCTTTCTAGGTATTTTGCAGCCAGTTAGCTTTCGATTAAGAATTTCGTGTTTAT
                      ____________________________________________________________
consensus             TGTGCTGCTTTCTAGGTATTTTGCAGCCAGTTAGCTTTCGATTAAGAATTTCGTGTTTAT
 
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rJMSF013N10+          TGGTGTGATGTATCTACCATGGAGTGAATTTTTTGGTTGTTTGGAAGCT           
rJMFF036A19+          TGGTGTGATGTATCTA-CATGGAGTGAATTTTTTGGTTGTTTGGAAGCTTGAAGTTGTAA
                      ____________________________________________________________
consensus             TGGTGTGATGTATCTACCATGGAGTGAATTTTTTGGTTGTTTGGAAGCTTGAAGTTGTAA