Contig 004073:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035E11Sequence196006723 (3)789004073 (4)ref|XP_006346466.1|159PREDICTED: uncharacterized protein LOC102581518 [Solanum tuberosum]
JMSF018P11Sequence481006723 (3)ref|XP_004230819.1|135PREDICTED: uncharacterized protein LOC101251130 [Solanum lycopersicum]779004073 (4)ref|XP_006346466.1|123PREDICTED: uncharacterized protein LOC102581518 [Solanum tuberosum]
JMSF048F14Sequence717006723 (3)ref|XP_004230819.1|260PREDICTED: uncharacterized protein LOC101251130 [Solanum lycopersicum]814004073 (4)ref|XP_006346466.1|168PREDICTED: uncharacterized protein LOC102581518 [Solanum tuberosum]
JMSF049F14Sequence462004073 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF048F14+ AATGGAGGGCATACATGATGATGTATCTGACTTAATATGTG
rJMSF018P11+ ATATGTG
rJMFF035E11+ ATATGTG
                      ____________________________________________________________
consensus AATGGAGGGCATACATGATGATGTATCTGACTTAATATGTG
 
. : . : . : . : . : . :
rJMSF048F14+ ACCTCCAAAATGCAGCGGTGGACTCAAATGAAAGTTTTCGAAGAGTTGCACTTGGGCCGA
rJMSF018P11+ ACCTCCAAAATGCAGCGGTGGACTCAAATGAAAGTCTTCGAAGAGTTGCAC-TNGGCCGA
rJMFF035E11+ ACCTCCAAAATGCAGCGGTGGACTCAAATGAAAGTTTTCGAAGAGTTGCACTTGGGCCGA
                      ____________________________________________________________
consensus ACCTCCAAAATGCAGCGGTGGACTCAAATGAAAGTTTTCGAAGAGTTGCACTTGGGCCGA
 
. : . : . : . : . : . :
rJMSF048F14+ ATGATCATTTCTTCTTGCCAAGTTCAGCAGAGTATCGGAACAGTAGAGATTATGGGTGTC
rJMSF018P11+ ATGATCATTTCTTCTTGCCAAGTTCAGCAGAGTATCGGAACAGTAGAGATTATGGGTGTC
rJMFF035E11+ ATGATCATTTCTTCTTGCCAAGTTCAGCAGAGTATCGGAACAGTAGAGATTATGGGTGTC
                      ____________________________________________________________
consensus ATGATCATTTCTTCTTGCCAAGTTCAGCAGAGTATCGGAACAGTAGAGATTATGGGTGTC
 
. : . : . : . : . : . :
rJMSF048F14+ AGCAGGAGCAAAAAGAAAAAGAAAACATGACTCATAGGCCAAACCTGAGTATAAATGCAC
rJMSF018P11+ AGCAGGAGCAAAAAGAAAAAGAAAACATGACTCATAGGCCAAACCTGAGTATAAATGCAC
rJMFF035E11+ AGCAGGAGCAAAAAGAAAAAGAAAACATGACTCATAGGCCAAACCTGAGTATAAATGCAC
                      ____________________________________________________________
consensus AGCAGGAGCAAAAAGAAAAAGAAAACATGACTCATAGGCCAAACCTGAGTATAAATGCAC
 
. : . : . : . : . : . :
rJMSF048F14+ ACAGCGTTCTTGGCCAAATCCTCTTTGATGCATGTGTCCCGAAGAATGTTGAAGGCTGGG
rJMSF018P11+ ACAGCGTTCTTGGCCAAATCCTCTTTGATGCATGTGTCCCGAAGAATGTTGAAGGCTGGG
rJMFF035E11+ ACAGCGTTCTTGGCCAAATCCTCTTTGATGCATGTGTCCCGAAGAATGTTGAAGGCTGGG
                      ____________________________________________________________
consensus ACAGCGTTCTTGGCCAAATCCTCTTTGATGCATGTGTCCCGAAGAATGTTGAAGGCTGGG
 
. : . : . : . : . : . :
rJMSF048F14+ ATATTAAGTTTTCCAGTTCCTCAAAAGGCCATCCATTTACTTCTCGACGTAAACACTCAC
rJMSF018P11+ ATATTAAGTTTTCCAGTTCCTCAAAAGGCCATCCATTTACTTCTCGACGTAAACACTCAC
rJMSF049F14+ CTCAC
rJMFF035E11+ ATATTAAGTTTTCCAGTTCCTCAAAAGGCCATCCATTTACTTCTCGACGTAAACACTCAC
                      ____________________________________________________________
consensus ATATTAAGTTTTCCAGTTCCTCAAAAGGCCATCCATTTACTTCTCGACGTAAACACTCAC
 
. : . : . : . : . : . :
rJMSF048F14+ CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGGCTGTGAGCCCGGCCTGTTTGGAATA
rJMSF018P11+ CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGGCTGTGAGCCCGGCCTGTTTGGAATA
rJMSF049F14+ CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGNCTGTGAGCCCGGCCTGTTTGGAATA
rJMFF035E11+ CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGGCTGTGAGCCCGGCCTGTTTGGAATA
                      ____________________________________________________________
consensus CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGGCTGTGAGCCCGGCCTGTTTGGAATA
 
. : . : . : . : . : . :
rJMSF048F14+ CTATATATGCATGCCAAGATCAAATTGGCAGAAACTTCAAAAACCTATCGACTTTGCAAT
rJMSF018P11+ CTATATATGCATGCCAAGATCAAATTGGCAGAAACTTCAAAAACCTATCGACTTTGCAAT
rJMSF049F14+ CTATATATGCATGCCAAGATCAAATTGGCNGAAACTTCAAAAACCTATCGNCTTTGCAAT
rJMFF035E11+ CTATATATGCATGCCAAGATCAAATTGGCAGAAACTTCAAAAACCTATCGACTTTGCAAT
                      ____________________________________________________________
consensus CTATATATGCATGCCAAGATCAAATTGGCAGAAACTTCAAAAACCTATCGACTTTGCAAT
 
. : . : . : . : . : . :
rJMSF048F14+ GGAAACCTCCCAGATGGCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
rJMSF018P11+ GGAAACCTCCCAGATGGCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
rJMSF049F14+ GGAAACCTCCCAGATGNCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
rJMFF035E11+ GGAAACCTCCCAGATGGCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
                      ____________________________________________________________
consensus GGAAACCTCCCAGATGGCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
 
. : . : . : . : . : . :
rJMSF048F14+ ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
rJMSF018P11+ ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
rJMSF049F14+ ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
rJMFF035E11+ ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
                      ____________________________________________________________
consensus ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
 
. : . : . : . : . : . :
rJMSF048F14+ GAAGTGTGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
rJMSF018P11+ GAAGTGTGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
rJMSF049F14+ GAAGTGNGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
rJMFF035E11+ GAAGTGTGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
                      ____________________________________________________________
consensus GAAGTGTGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
 
. : . : . : . : . : . :
rJMSF048F14+ GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
rJMSF018P11+ GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
rJMSF049F14+ GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
rJMFF035E11+ GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
                      ____________________________________________________________
consensus GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
 
. : . : . : . : . : . :
rJMSF048F14+ TAATGTGCTATGGGGTTCACTGTATTGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
rJMSF018P11+ TAATGTGCTATGGGGTTCACTGTATTGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
rJMSF049F14+ TAATGTGCTATGGGGTTCACTGTATNGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
rJMFF035E11+ TAATGTGCTATGGGGTTCACTGTATTGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
                      ____________________________________________________________
consensus TAATGTGCTATGGGGTTCACTGTATTGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
 
. : . : . : . : . : . :
rJMSF048F14+ ATATGTCTAGTATGTCTGGAGATCAAGAAACCAGGATGGTGTTGTACTGTACT
rJMSF018P11+ ATATGTCTAGTATGTCTGGAGATCAAGAAACCAGGATGGTGTTGTACTGTACT
rJMSF049F14+ ATATGTCTAGTATGTCTGGAGATCAAGAAA
rJMFF035E11+ ATATGTCTAGTATGTCTGGAGATCAAGAAA-CAGGATGGTGTTGTACTGTACTCTAACAT
                      ____________________________________________________________
consensus ATATGTCTAGTATGTCTGGAGATCAAGAAACCAGGATGGTGTTGTACTGTACTCTAACAT