Contig 004073:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035E11Sequence196006723 (3)789004073 (4)ref|XP_006346466.1|159PREDICTED: uncharacterized protein LOC102581518 [Solanum tuberosum]
JMSF018P11Sequence481006723 (3)ref|XP_004230819.1|135PREDICTED: uncharacterized protein LOC101251130 [Solanum lycopersicum]779004073 (4)ref|XP_006346466.1|123PREDICTED: uncharacterized protein LOC102581518 [Solanum tuberosum]
JMSF048F14Sequence717006723 (3)ref|XP_004230819.1|260PREDICTED: uncharacterized protein LOC101251130 [Solanum lycopersicum]814004073 (4)ref|XP_006346466.1|168PREDICTED: uncharacterized protein LOC102581518 [Solanum tuberosum]
JMSF049F14Sequence462004073 (4)

Alignment

This contig is upended


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rJMSF048F14+                             AATGGAGGGCATACATGATGATGTATCTGACTTAATATGTG
rJMSF018P11+                                                               ATATGTG
rJMFF035E11+                                                               ATATGTG
                      ____________________________________________________________
consensus                                AATGGAGGGCATACATGATGATGTATCTGACTTAATATGTG
 
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rJMSF048F14+          ACCTCCAAAATGCAGCGGTGGACTCAAATGAAAGTTTTCGAAGAGTTGCACTTGGGCCGA
rJMSF018P11+          ACCTCCAAAATGCAGCGGTGGACTCAAATGAAAGTCTTCGAAGAGTTGCAC-TNGGCCGA
rJMFF035E11+          ACCTCCAAAATGCAGCGGTGGACTCAAATGAAAGTTTTCGAAGAGTTGCACTTGGGCCGA
                      ____________________________________________________________
consensus             ACCTCCAAAATGCAGCGGTGGACTCAAATGAAAGTTTTCGAAGAGTTGCACTTGGGCCGA
 
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rJMSF048F14+          ATGATCATTTCTTCTTGCCAAGTTCAGCAGAGTATCGGAACAGTAGAGATTATGGGTGTC
rJMSF018P11+          ATGATCATTTCTTCTTGCCAAGTTCAGCAGAGTATCGGAACAGTAGAGATTATGGGTGTC
rJMFF035E11+          ATGATCATTTCTTCTTGCCAAGTTCAGCAGAGTATCGGAACAGTAGAGATTATGGGTGTC
                      ____________________________________________________________
consensus             ATGATCATTTCTTCTTGCCAAGTTCAGCAGAGTATCGGAACAGTAGAGATTATGGGTGTC
 
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rJMSF048F14+          AGCAGGAGCAAAAAGAAAAAGAAAACATGACTCATAGGCCAAACCTGAGTATAAATGCAC
rJMSF018P11+          AGCAGGAGCAAAAAGAAAAAGAAAACATGACTCATAGGCCAAACCTGAGTATAAATGCAC
rJMFF035E11+          AGCAGGAGCAAAAAGAAAAAGAAAACATGACTCATAGGCCAAACCTGAGTATAAATGCAC
                      ____________________________________________________________
consensus             AGCAGGAGCAAAAAGAAAAAGAAAACATGACTCATAGGCCAAACCTGAGTATAAATGCAC
 
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rJMSF048F14+          ACAGCGTTCTTGGCCAAATCCTCTTTGATGCATGTGTCCCGAAGAATGTTGAAGGCTGGG
rJMSF018P11+          ACAGCGTTCTTGGCCAAATCCTCTTTGATGCATGTGTCCCGAAGAATGTTGAAGGCTGGG
rJMFF035E11+          ACAGCGTTCTTGGCCAAATCCTCTTTGATGCATGTGTCCCGAAGAATGTTGAAGGCTGGG
                      ____________________________________________________________
consensus             ACAGCGTTCTTGGCCAAATCCTCTTTGATGCATGTGTCCCGAAGAATGTTGAAGGCTGGG
 
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rJMSF048F14+          ATATTAAGTTTTCCAGTTCCTCAAAAGGCCATCCATTTACTTCTCGACGTAAACACTCAC
rJMSF018P11+          ATATTAAGTTTTCCAGTTCCTCAAAAGGCCATCCATTTACTTCTCGACGTAAACACTCAC
rJMSF049F14+                                                                 CTCAC
rJMFF035E11+          ATATTAAGTTTTCCAGTTCCTCAAAAGGCCATCCATTTACTTCTCGACGTAAACACTCAC
                      ____________________________________________________________
consensus             ATATTAAGTTTTCCAGTTCCTCAAAAGGCCATCCATTTACTTCTCGACGTAAACACTCAC
 
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rJMSF048F14+          CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGGCTGTGAGCCCGGCCTGTTTGGAATA
rJMSF018P11+          CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGGCTGTGAGCCCGGCCTGTTTGGAATA
rJMSF049F14+          CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGNCTGTGAGCCCGGCCTGTTTGGAATA
rJMFF035E11+          CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGGCTGTGAGCCCGGCCTGTTTGGAATA
                      ____________________________________________________________
consensus             CACAAAACGCCAAGAAGGGCCTTATTCGCTCAAGGCTGTGAGCCCGGCCTGTTTGGAATA
 
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rJMSF048F14+          CTATATATGCATGCCAAGATCAAATTGGCAGAAACTTCAAAAACCTATCGACTTTGCAAT
rJMSF018P11+          CTATATATGCATGCCAAGATCAAATTGGCAGAAACTTCAAAAACCTATCGACTTTGCAAT
rJMSF049F14+          CTATATATGCATGCCAAGATCAAATTGGCNGAAACTTCAAAAACCTATCGNCTTTGCAAT
rJMFF035E11+          CTATATATGCATGCCAAGATCAAATTGGCAGAAACTTCAAAAACCTATCGACTTTGCAAT
                      ____________________________________________________________
consensus             CTATATATGCATGCCAAGATCAAATTGGCAGAAACTTCAAAAACCTATCGACTTTGCAAT
 
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rJMSF048F14+          GGAAACCTCCCAGATGGCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
rJMSF018P11+          GGAAACCTCCCAGATGGCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
rJMSF049F14+          GGAAACCTCCCAGATGNCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
rJMFF035E11+          GGAAACCTCCCAGATGGCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
                      ____________________________________________________________
consensus             GGAAACCTCCCAGATGGCCGAGAGGCGAGAGAAATCATGTGAGAGGTGATTTTGACAGGC
 
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rJMSF048F14+          ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
rJMSF018P11+          ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
rJMSF049F14+          ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
rJMFF035E11+          ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
                      ____________________________________________________________
consensus             ACCACTAACTAGTAACTACCATATCTGCCTTGACTTTGAGCTTCTGTGTATAGGGATTGA
 
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rJMSF048F14+          GAAGTGTGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
rJMSF018P11+          GAAGTGTGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
rJMSF049F14+          GAAGTGNGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
rJMFF035E11+          GAAGTGTGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
                      ____________________________________________________________
consensus             GAAGTGTGTATAAAGTGAGGTGTTTCTTGAATCTTGAAAGCTTCCTCTGTGATTTTGTAA
 
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rJMSF048F14+          GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
rJMSF018P11+          GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
rJMSF049F14+          GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
rJMFF035E11+          GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
                      ____________________________________________________________
consensus             GGTGACAGACAGCACAGCACATAGTTGATGGCTGGTAAATATGTGGGGTTAGGGAATTAG
 
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rJMSF048F14+          TAATGTGCTATGGGGTTCACTGTATTGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
rJMSF018P11+          TAATGTGCTATGGGGTTCACTGTATTGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
rJMSF049F14+          TAATGTGCTATGGGGTTCACTGTATNGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
rJMFF035E11+          TAATGTGCTATGGGGTTCACTGTATTGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
                      ____________________________________________________________
consensus             TAATGTGCTATGGGGTTCACTGTATTGTATAGTGTAATATCTATTCTCCCACTCCCAGGA
 
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rJMSF048F14+          ATATGTCTAGTATGTCTGGAGATCAAGAAACCAGGATGGTGTTGTACTGTACT       
rJMSF018P11+          ATATGTCTAGTATGTCTGGAGATCAAGAAACCAGGATGGTGTTGTACTGTACT       
rJMSF049F14+          ATATGTCTAGTATGTCTGGAGATCAAGAAA                              
rJMFF035E11+          ATATGTCTAGTATGTCTGGAGATCAAGAAA-CAGGATGGTGTTGTACTGTACTCTAACAT
                      ____________________________________________________________
consensus             ATATGTCTAGTATGTCTGGAGATCAAGAAACCAGGATGGTGTTGTACTGTACTCTAACAT