Contig 004070:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034M16Sequence510004809 (8)ref|XP_006436144.1|2e-32hypothetical protein CICLE_v10030782mg [Citrus clementina] ref|XP_006485994.1| P649004070 (5)gb|AAS76671.1|3e-115WBC1 ABC transporter [Nicotiana tabacum]
JMFF043P14Sequence632004809 (8)ref|XP_003633443.1|5e-52PREDICTED: ABC transporter G family member 6-like [Vitis vinifera]465004070 (5)gb|AAS76671.1|8e-94WBC1 ABC transporter [Nicotiana tabacum]
JMFN008A24Sequence615004070 (5)emb|CDP00016.1|1e-106unnamed protein product [Coffea canephora]
JMFN043D19Sequence597004070 (5)ref|XP_009626224.1|3e-91PREDICTED: ABC transporter G family member 6 [Nicotiana tomentosiformis]
JMSF035J06Sequence707004809 (8)ref|XP_009626224.1|3e-52PREDICTED: ABC transporter G family member 6 [Nicotiana tomentosiformis]706004070 (5)ref|XP_009796484.1|1e-133PREDICTED: ABC transporter G family member 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN008A24-                                                  CTGAAGGAAGCCATCAGCGCC
                      ____________________________________________________________
consensus                                                    CTGAAGGAAGCCATCAGCGCC
 
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JMFN008A24-           AGTATTTCCCGGGGAAAACTAGTCCCCGGAGCGACGAATGACGCCAGCACTACGTCACTG
                      ____________________________________________________________
consensus             AGTATTTCCCGGGGAAAACTAGTCCCCGGAGCGACGAATGACGCCAGCACTACGTCACTG
 
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JMFN008A24-           GTCCCCACTTTCGCCAACCCGTTCTGGACGGAAATGGTGGTTCTCTCCAAACGGTCCTTT
                      ____________________________________________________________
consensus             GTCCCCACTTTCGCCAACCCGTTCTGGACGGAAATGGTGGTTCTCTCCAAACGGTCCTTT
 
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JMFN008A24-           AAAAACTCGAGCCGGATGCCCGCACTTTTCGGGACACGGTTAGGAGCGGTTATGGTGACC
                      ____________________________________________________________
consensus             AAAAACTCGAGCCGGATGCCCGCACTTTTCGGGACACGGTTAGGAGCGGTTATGGTGACC
 
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JMFN008A24-           GGATTCATCCTAGCTACAATGTTCTGGCGACTCGATAATTCCCCCAAAGGAGTACAGGAA
                      ____________________________________________________________
consensus             GGATTCATCCTAGCTACAATGTTCTGGCGACTCGATAATTCCCCCAAAGGAGTACAGGAA
 
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JMFN008A24-           CGGCTAGGATTCTTCGCCTTCGCGATGTCCACAACCTTCTACACGTGCGCCGACGCGCTG
JMFN043D19-                                                                   GCTG
rJMSF035J06+                                                                  GCTG
                      ____________________________________________________________
consensus             CGGCTAGGATTCTTCGCCTTCGCGATGTCCACAACCTTCTACACGTGCGCCGACGCGCTG
 
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JMFN008A24-           CCGGTGTTCATCCAGGAACGGTATATTTTCCTGAGAGAAACGGCGTACAACGCCTACCGG
JMFN043D19-           CCGGTGTTCATCCAGGAACGGTATATTTTCCTGAGAGAAACGGCGTACAACGCCTACCGG
rJMSF035J06+          CCGGTGTTCATCCAGGAACGGTATATTTTCCTGAGAGAAACGGCGTACAACGCCTACCGG
                      ____________________________________________________________
consensus             CCGGTGTTCATCCAGGAACGGTATATTTTCCTGAGAGAAACGGCGTACAACGCCTACCGG
 
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JMFN008A24-           AGATCCTCCTACTGTCTCTCCCACGCGCTGGTCTCCTTCCCGTCGCTAGTCTTCCTCGCG
JMFN043D19-           AGATCCTCCTACTGTCTCTCCCACGCGCTGGTCTCCTTCCCGTCGCTAGTCTTCCTCGCG
rJMSF035J06+          AGATCCTCCTACTGTCTCTCCCACGCGCTGGTCTCCTTCCCGTCGCTAGTCTTCCTCGCG
                      ____________________________________________________________
consensus             AGATCCTCCTACTGTCTCTCCCACGCGCTGGTCTCCTTCCCGTCGCTAGTCTTCCTCGCG
 
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JMFN008A24-           TTCGCCTTCGCGGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
JMFN043D19-           TTCGCCTTCGCGGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
rJMSF035J06+          TTCGCCTTCGCGGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
rJMFF034M16+                     GGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
                      ____________________________________________________________
consensus             TTCGCCTTCGCGGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
 
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JMFN008A24-           TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
JMFN043D19-           TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
rJMSF035J06+          TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
rJMFF034M16+          TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
                      ____________________________________________________________
consensus             TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
 
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JMFN008A24-           CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATGGTCGTCGCCATC      
JMFN043D19-           CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
rJMSF035J06+          CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
rJMFF043P14+                       TCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
rJMFF034M16+          CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
                      ____________________________________________________________
consensus             CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
 
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JMFN043D19-           TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
rJMSF035J06+          TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
rJMFF043P14+          TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
rJMFF034M16+          TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
                      ____________________________________________________________
consensus             TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
 
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JMFN043D19-           TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
rJMSF035J06+          TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
rJMFF043P14+          TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
rJMFF034M16+          TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
                      ____________________________________________________________
consensus             TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
 
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JMFN043D19-           GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
rJMSF035J06+          GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
rJMFF043P14+          GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
rJMFF034M16+          GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
                      ____________________________________________________________
consensus             GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
 
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JMFN043D19-           GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGAT-AGCAGCACGCTGAACATT
rJMSF035J06+          GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGATGAGCAGCACGCTGAACATT
rJMFF043P14+          GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGATGAGCAGCACGCTGAACATT
rJMFF034M16+          GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGATGAGCAGCACGCTGAACATT
                      ____________________________________________________________
consensus             GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGATGAGCAGCACGCTGAACATT
 
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JMFN043D19-           AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCG                       
rJMSF035J06+          AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCGACATTCTGGCGCAGCAGGGAGTG
rJMFF043P14+          AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCGACATTCTGGCGCAGCAGGGAGTG
rJMFF034M16+          AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCGACATTCTGGCGCAGCAGGGAGTG
                      ____________________________________________________________
consensus             AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCGACATTCTGGCGCAGCAGGGAGTG
 
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rJMSF035J06+          ACGGACCTCAGCAAGTGGGGGTGCTTGTGGGTGACGATTGCATGGGGATTTTTCTTTAGG
rJMFF043P14+          ACGGACCTCAGCAAGTGGGGGTGCTTGTGGGTGACGATTGCATGGGGATTTTTCTTTAGG
rJMFF034M16+          ACGGACCTCAGCAAGTGGGGGTGCTTGTGGGTGACGATTGCATGGGGATTTTTCTTTAGG
                      ____________________________________________________________
consensus             ACGGACCTCAGCAAGTGGGGGTGCTTGTGGGTGACGATTGCATGGGGATTTTTCTTTAGG
 
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rJMSF035J06+          ATTTTATTTTATTTCTGCCTG                                       
rJMFF043P14+          ATTTTATTTTATTTCTGCCTGTTACTGGGAAGCAAGAACAAGAGAAGGTAATAAGTCC  
rJMFF034M16+          ATTTTATTTTATTTCTGCCTGTTACTGGGAAGCAAGAACAAGAGAAGGTAATAAGTCCAA
                      ____________________________________________________________
consensus             ATTTTATTTTATTTCTGCCTGTTACTGGGAAGCAAGAACAAGAGAAGGTAATAAGTCCAA
 
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rJMFF034M16+          AAAAAGAAAAAAACACTACTATACGGAGTATTAATTACTCACTGTAAAACTAAAGTTTCT
                      ____________________________________________________________
consensus             AAAAAGAAAAAAACACTACTATACGGAGTATTAATTACTCACTGTAAAACTAAAGTTTCT