Contig 004068:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034K02Sequence172004068 (2)gb|AAR01523.1|2e-17cytosolic class I small heat shock protein 3B, partial [Nicotiana tabacum] gb|A646004068 (2)ref|XP_011081426.1|2e-72PREDICTED: 18.2 kDa class I heat shock protein-like [Sesamum indicum]

Alignment

This contig is upended


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rJMFF034K02-                        AGCACTCAATTTCTTAATACAGAGCATTTGTTCAGCACTTTATTTC
                      ____________________________________________________________
consensus                           AGCACTCAATTTCTTAATACAGAGCATTTGTTCAGCACTTTATTTC
 
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rJMFF034K02-          AAAATTTCATACACACGAAATAAGAGGTTTAAGCAGAGATGTCAATGGTTTTGATTTCAG
                      ____________________________________________________________
consensus             AAAATTTCATACACACGAAATAAGAGGTTTAAGCAGAGATGTCAATGGTTTTGATTTCAG
 
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rJMFF034K02-          GTTTCTTAACTTTCACTTTGGGAACAGTTACAGTGAGCACTCCATTCTCCATAGAAGCTT
                      ____________________________________________________________
consensus             GTTTCTTAACTTTCACTTTGGGAACAGTTACAGTGAGCACTCCATTCTCCATAGAAGCTT
 
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rJMFF034K02-          TCACCTCATCCATCTTCGCATTCTCCGGCAGCCGGAATCTCCTTAGGAACTTACCGCTGC
                      ____________________________________________________________
consensus             TCACCTCATCCATCTTCGCATTCTCCGGCAGCCGGAATCTCCTTAGGAACTTACCGCTGC
 
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JMFF034K02+                                                            CCTCTCTCCGC
rJMFF034K02-          TCCGCTCCACACGGTGCCATTTCTCATTCTTTTCCTCCTGCCCTCTGCTCCTCTCTCCGC
                      ____________________________________________________________
consensus             TCCGCTCCACACGGTGCCATTTCTCATTCTTTTCCTCCTGCCCTCTGCTCCTCTCTCCGC
 
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JMFF034K02+           TGATGTGCAAAACTCTCCCTTCCTCCACTTCCACCTTCACCTCCTCCTTCTTCAGCCCCG
rJMFF034K02-          TGATCTGCAAAACTCTCCCTTCCTCCACTTCCACCTTCACCTCCTCCTTCTTCAGCCCCG
                      ____________________________________________________________
consensus             TGATGTGCAAAACTCTCCCTTCCTCCACTTCCACCTTCACCTCCTCCTTCTTCAGCCCCG
 
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JMFF034K02+           GCAGATCCGCCTTGAACACGTGAGCCTCCGGCGTCTCCTTCCAGTCAATACGGGCGTTTG
rJMFF034K02-          GCAGATCCGCCTTGAACACGTGAGCCTCCGGCGTCTCCTTCCAGTCAATACGGGCGTTTG
                      ____________________________________________________________
consensus             GCAGATCCGCCTTGAACACGTGAGCCTCCGGCGTCTCCTTCCAGTCAATACGGGCGTTTG
 
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JMFF034K02+           CAAAGGCCGATGTTTCCCCTGCAGAGCCGCCGGGGGCATTG                   
rJMFF034K02-          CAAAGGCCGATGTTTCCCCTGCAGAGCCGCCGGGGGCATTGGCGACGGCGCTGGAAAACG
                      ____________________________________________________________
consensus             CAAAGGCCGATGTTTCCCCTGCAGAGCCGCCGGGGGCATTGGCGACGGCGCTGGAAAACG
 
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rJMFF034K02-          GGAACCCTTCAAAAGCATCCCACAAGTCTAGAGAAAAGGGGTCGAAGATGTTGCTCCGGC
                      ____________________________________________________________
consensus             GGAACCCTTCAAAAGCATCCCACAAGTCTAGAGAAAAGGGGTCGAAGATGTTGCTCCGGC
 
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rJMFF034K02-          GAGCTCCAAAGATGCTTGGAATCAAAGACATTTTCTTGATTGAATGAGCTGAGAATTCTT
                      ____________________________________________________________
consensus             GAGCTCCAAAGATGCTTGGAATCAAAGACATTTTCTTGATTGAATGAGCTGAGAATTCTT
 
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rJMFF034K02-          AGGGTAATAGCTGAGTGTGAATACAATGAGGAATGCTTGAAAGTTCTTCAGTTTTGATGC
                      ____________________________________________________________
consensus             AGGGTAATAGCTGAGTGTGAATACAATGAGGAATGCTTGAAAGTTCTTCAGTTTTGATGC