Contig 004067:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034H01Sequence589003505 (7)gb|EYU30367.1|4e-50hypothetical protein MIMGU_mgv1a012795mg [Erythranthe guttata]648004067 (2)emb|CDP01836.1|8e-11unnamed protein product [Coffea canephora]
JMFF034H02Sequence616004067 (2)emb|CDP01836.1|5e-11unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF034H02+                                                      TTTCACATGCATCTGA
rJMFF034H01+                     ACACAGCTTGATCACTGGGCAGCTAAAACAGCTTTTCACATGCATCTGA
                      ____________________________________________________________
consensus                        ACACAGCTTGATCACTGGGCAGCTAAAACAGCTTTTCACATGCATCTGA
 
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rJMFF034H02+          TCAACTAAACATAGCAACTATTTTGACCAACAACTTATTACAACCTCAGCAAATAGTTTC
rJMFF034H01+          TCAACTAAACATAGCAACTATTTTGACCAACAAC-TATTACAACCTCAGCAAATAGTTTC
                      ____________________________________________________________
consensus             TCAACTAAACATAGCAACTATTTTGACCAACAACTTATTACAACCTCAGCAAATAGTTTC
 
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rJMFF034H02+          AACTCTCAACTAATCAACAGTCAATAGCAACAATCTAATGAGGCTTTTATGTCCCGAAGG
rJMFF034H01+          AACTCTCAACTAATCAACAGTCAATAGCAACAATCTAATGAGGCTTTTATGTCCCGAAGG
                      ____________________________________________________________
consensus             AACTCTCAACTAATCAACAGTCAATAGCAACAATCTAATGAGGCTTTTATGTCCCGAAGG
 
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rJMFF034H02+          AAACGGGCAAGGACCCCAACACCTGGGCATTATCTTGGGCTCAAGAGCAGCAGGGGCGAG
rJMFF034H01+          AAACGGGCAAGGACCCCAACACCTGGGCATTATCTTGGGCTCAAGAGCAGCAGGGGCGAG
                      ____________________________________________________________
consensus             AAACGGGCAAGGACCCCAACACCTGGGCATTATCTTGGGCTCAAGAGCAGCAGGGGCGAG
 
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rJMFF034H02+          AGTTATCGTGGTGACCGTGGAGATCGTGGAGACCGTGGAAGGTACCGTGGCTACAATGAC
rJMFF034H01+          AGTTATCGTGGTGACCGTGGAGATCGTGGAGACCGTGGAAGGTACCGTGGCTACAATGAC
                      ____________________________________________________________
consensus             AGTTATCGTGGTGACCGTGGAGATCGTGGAGACCGTGGAAGGTACCGTGGCTACAATGAC
 
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rJMFF034H02+          TATGGCCATCGAAGGTCTCCAAGACGTTCTCCATATCGAGGTGGCCGAGAGCGAGATCAT
rJMFF034H01+          TATGGCCATCGAAGGTCTCCAAGACGTTCTCCATATCGAGGTGGCCGAGAGCGAGATCAT
                      ____________________________________________________________
consensus             TATGGCCATCGAAGGTCTCCAAGACGTTCTCCATATCGAGGTGGCCGAGAGCGAGATCAT
 
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rJMFF034H02+          TCTCCTAGGCCTTCACCATATGGGGGAAGGTCAAGAAGGGATCGGTCGAGGTCATATTCT
rJMFF034H01+          TCTCCTAGGCCTTCACCATATGGGGGAAGGTCAAGAAGGGATCGGTCGAGGTCATATTCT
                      ____________________________________________________________
consensus             TCTCCTAGGCCTTCACCATATGGGGGAAGGTCAAGAAGGGATCGGTCGAGGTCATATTCT
 
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rJMFF034H02+          CCTTATCGCAGTCTTGAAAGGAACTATGCTCGTGGTAGATAGGACCTTTCGTCATGGATC
rJMFF034H01+          CCTTATCGCAGTCTTGAAAGGAACTATGCTCGTGGTAGATAGGACCTTTCGTCATGGATC
                      ____________________________________________________________
consensus             CCTTATCGCAGTCTTGAAAGGAACTATGCTCGTGGTAGATAGGACCTTTCGTCATGGATC
 
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rJMFF034H02+          TGTCATATTTTCTAGCTGAGTTTCTGTCTGATTGAAGTCTGGTTTGAATTTCTGAATACT
rJMFF034H01+          TGTCATATTTTCTAGCTGAGTTTCTGTCTGATTGAAGTCTGGTTTGAATTTCTGAATACT
                      ____________________________________________________________
consensus             TGTCATATTTTCTAGCTGAGTTTCTGTCTGATTGAAGTCTGGTTTGAATTTCTGAATACT
 
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rJMFF034H02+          GATGCATGTTTTGTGCCTTTCTAAACTTCCATCTTCCCTGCCTTGAACTCTTGAAGGTTT
rJMFF034H01+          GATGCATGTTTTGTGCCTTTCTAAACTTCCATCTTCCCTGCCTTGAACTCTTGAAGGTTT
                      ____________________________________________________________
consensus             GATGCATGTTTTGTGCCTTTCTAAACTTCCATCTTCCCTGCCTTGAACTCTTGAAGGTTT
 
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rJMFF034H02+          GAACTAAAAAATGGTAGTGACATCGAAGCTGAATTGTTACATTGTTGTGTATATTGTTGT
rJMFF034H01+          GAACTAAAAAATGGTAGTGACATCGAAGCTGAATTGTTACATTGTTGTGTATATTGTTGT
                      ____________________________________________________________
consensus             GAACTAAAAAATGGTAGTGACATCGAAGCTGAATTGTTACATTGTTGTGTATATTGTTGT