| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033N02 | Sequence | 483 | 005064 (6) | ref|XP_011091381.1| | 66.2 | PREDICTED: uncharacterized protein LOC105171836 [Sesamum indicum] | 746 | 004063 (5) | ref|XP_009624020.1| | 2e-44 | PREDICTED: uncharacterized protein LOC104115142 isoform X1 [Nicotiana tomentosi |
| JMSF014G12 | Sequence | 469 | 005064 (6) | 766 | 004063 (5) | ref|XP_009773266.1| | 2e-63 | PREDICTED: uncharacterized protein LOC104223509 isoform X2 [Nicotiana sylvestri | |||
| JMSF020J19 | Sequence | 494 | 005064 (6) | ref|XP_011091381.1| | 50.4 | PREDICTED: uncharacterized protein LOC105171836 [Sesamum indicum] | 764 | 004063 (5) | ref|XP_009773266.1| | 2e-63 | PREDICTED: uncharacterized protein LOC104223509 isoform X2 [Nicotiana sylvestri |
| JMSF031H24 | Sequence | 289 | 005064 (6) | 602 | 004063 (5) | ref|XP_009773266.1| | 8e-32 | PREDICTED: uncharacterized protein LOC104223509 isoform X2 [Nicotiana sylvestri | |||
| JMSF038P10 | Sequence | 622 | 005064 (6) | ref|XP_009781765.1| | 82.4 | PREDICTED: uncharacterized protein LOC104230607 [Nicotiana sylvestris] | 876 | 004063 (5) | ref|XP_009773265.1| | 9e-67 | PREDICTED: uncharacterized protein LOC104223509 isoform X1 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMSF038P10+ ANAAAAATAGATGTCTCAACGTCANCAGAGGATCTTGATGACAATGAA
____________________________________________________________
consensus ANAAAAATAGATGTCTCAACGTCANCAGAGGATCTTGATGACAATGAA
. : . : . : . : . : . :
rJMSF020J19+ CTAGTACC
rJMSF014G12+ CTAGTACC
rJMSF038P10+ GGTTTGGTCACTTCAGTGGATGATCCAAACCCCGGAGCTCAGACTACTGCTACTAGTACC
____________________________________________________________
consensus GGTTTGGTCACTTCAGTGGATGATCCAAACCCCGGAGCTCAGACTACTGCTACTAGTACC
. : . : . : . : . : . :
rJMSF020J19+ GAGTCCTCCGACTTTCCTCATCTGCTTGACGGTGGACAGCTCAGATTTGAAGGATCAGCA
rJMSF014G12+ GAGTCCTCCGACTTTCCTCATCTGCTTGACGGTGGACAGCTCAGATTTGAAGGATCAGCA
rJMSF038P10+ GAGTCCTCCGACTTTCCTCATCTGCTTGACGGTGGACAGCTCAGATTTGAAGGATCAGCA
rJMFF033N02+ GTGGACAGCTCAGATTTGAAGGATCAGCA
____________________________________________________________
consensus GAGTCCTCCGACTTTCCTCATCTGCTTGACGGTGGACAGCTCAGATTTGAAGGATCAGCA
. : . : . : . : . : . :
rJMSF020J19+ TTGACCATTCCTCCTGATCAAATAAGAATGATCCAAAATATTAACACATTAATCTCTGAG
rJMSF014G12+ TTGACCATTCCTCCTGATCAAATAAGAATGATCCAAAATATTAACACATTAATCTCTGAG
rJMSF038P10+ TTGACCATTCCTCCTGATCAAATAAGAATGATCCAAAATATTAACACATTAATCTCTGAG
rJMFF033N02+ TTGACCATTCCTCCTGATCAAATAAGAATGATCCAAAATATTAACACATTAATCTCTGAG
____________________________________________________________
consensus TTGACCATTCCTCCTGATCAAATAAGAATGATCCAAAATATTAACACATTAATCTCTGAG
. : . : . : . : . : . :
rJMSF020J19+ TTATCATTGGAGAAAACAGAGTTGATGAAAGCCTTCTCTGCAGAATCATCTGAATGCTCT
rJMSF014G12+ TTATCATTGGAGAAAACAGAGTTGATGAAAGCCTTCTCTGCAGAATCATCTGAATGCTCT
rJMSF031H24+ TGCAGAATCATCTGAATGCTCT
rJMSF038P10+ TTATCATTGGAGAAAACAGAGTTGATGAAAGCCTTCTCTGCAGAATCATCTGAATGCTCT
rJMFF033N02+ TTATCATTGGAGAAAACAGAGTTGATGAAAGCCTTCTCTGCAGAATCATCTGAATGCTCT
____________________________________________________________
consensus TTATCATTGGAGAAAACAGAGTTGATGAAAGCCTTCTCTGCAGAATCATCTGAATGCTCT
. : . : . : . : . : . :
rJMSF020J19+ AAACTCAAGGAGTTAAA--CAAGGAGTTAACCAGAAAGCTTGAAGCTCAAACACAAAGGT
rJMSF014G12+ AAACTCAAGGAGTTAAA--CAAGGAGTTAACCAGAAAGCTTGAAGCTCAAACACAAAGGT
rJMSF031H24+ AAACTCAAGTAGTTAAAACAANGGAGTTAACCAGAAAGCTTGAAGCTCAAACACAAAGGT
rJMSF038P10+ AAACTCAAGTAGTTAAA--CAAGGAGTTAACCAGAAAGCTTGAAGCTCAAACACAAAGGT
rJMFF033N02+ AAACTCAAGGAGTTAAA--CAAGGAGTTAACCAGAAAGCTTGAAGCTCAAACACAAAGGT
____________________________________________________________
consensus AAACTCAAGGAGTTAAA--CAAGGAGTTAACCAGAAAGCTTGAAGCTCAAACACAAAGGT
. : . : . : . : . : . :
rJMSF020J19+ TGGAGCTTTTGACTGCTCAAAGCATGGCAGCTGATAATATTCCAGTGAGACAACCAGATA
rJMSF014G12+ TGGAGCTTTTGACTGCTCAAAGCATGGCAGCTGATAATATTCCAGTGAGACAACCAGATA
rJMSF031H24+ TGGAGCTTTTGACTGCTCAAAGCATGGCAGCTGATAATATTCCAGTGAGACAACCAGATA
rJMSF038P10+ TGGAGCTTTTGACTGCTCAAAGCATGGCAGCTGATAATATTCCAGTGAGACAACCAGATA
rJMFF033N02+ TGGAGCTTTTGACTGCTCAAAGCATGGCAGCTGATAATATTCCAGTGAGACAACCAGATA
____________________________________________________________
consensus TGGAGCTTTTGACTGCTCAAAGCATGGCAGCTGATAATATTCCAGTGAGACAACCAGATA
. : . : . : . : . : . :
rJMSF020J19+ GGCCTTTCCATGAGAACACCACATACGCCGATGAGGGTGATGAGGTGGTTGAAAGGGTAT
rJMSF014G12+ GGCCTTTCCATGAGAACACCACATACGCCGATGAGGGTGATGAGGTGGTTGAAAGGGTAT
rJMSF031H24+ GGCCTTTCCATGAGAACACCACATACGCCGATGAGGGTGATGAGGTGGTTGAAAGGGTAT
rJMSF038P10+ GGCCTTTCCATGAGAACACCACATACGCCGATGAGGGTGATGAGGTGGTTGAAAGGGTAT
rJMFF033N02+ GGCCTTTCCATGAGAACACCACATACGCCGATGAGGGTGATGAGGTGGTT-AAAGGGTAT
____________________________________________________________
consensus GGCCTTTCCATGAGAACACCACATACGCCGATGAGGGTGATGAGGTGGTTGAAAGGGTAT
. : . : . : . : . : . :
rJMSF020J19+ TGGGATGGATCATGAAGCTATTTCCTGGAGGGCCATCAAAACGAAGAACCAGCAAGCTTC
rJMSF014G12+ TGGGATGGATCATGAAGCTATTTCCTGGAGGGCCATCAAAACGAAGAACCAGCAAGCTTC
rJMSF031H24+ TGGGATGGATCATGAAGCTATTTCCTGGAGGGCCATCAAAACGAAGAACCAGCAAGCTTC
rJMSF038P10+ TGGGATGGATCATGAAGCTATTTCCTGGAGGGCCATCAAAACGAAGAACCAGCAAGCTTC
rJMFF033N02+ TGGGATGGATCATGAAGCTATTTCCTGGAGGGCCATCAAAACGAAGAACCAGCAAGCTTC
____________________________________________________________
consensus TGGGATGGATCATGAAGCTATTTCCTGGAGGGCCATCAAAACGAAGAACCAGCAAGCTTC
. : . : . : . : . : . :
rJMSF020J19+ TTTAGTTTTCACCAAGGTTTCATTAAAGCTCCTTGTCGAAATGAGTTTTTGCTCCTCCCT
rJMSF014G12+ TTTAGTTTTCACCAAGGTTTCATTAAAGCTCCTTGTCGAAATGAGTTTTTGCTCCTCCCT
rJMSF031H24+ TTTAGTTTTCACCAAGGTTTCATTAAAGCTCCTTGTCGAAATGAGTTTTTGCTCCTCCCT
rJMSF038P10+ TTTAGTTTTCACCAAGGTTTCATTAAAGCTCCTTGTCGAAATGAGTTTTTGCTCCTCCCT
rJMFF033N02+ TTTAGTTTTCACCAAGGTTTCATTAAAGCTCCTTGTCGAAATGAGTTTTTGCTCCTCCCT
____________________________________________________________
consensus TTTAGTTTTCACCAAGGTTTCATTAAAGCTCCTTGTCGAAATGAGTTTTTGCTCCTCCCT
. : . : . : . : . : . :
rJMSF020J19+ GACATCTCAACCCTGTAATTTTTGGTAGGCAGCTGGAGTCTAAAGTTTGTAATTAGCAGT
rJMSF014G12+ GACATCTCAACCCTGTAATTTTTGGTAGGCAGCTGGAGTCTAAAGTTTGTAATTAGCAGT
rJMSF031H24+ GACATCTCAACCCTGTAATTTTTGGTAGGCAGCTGGAGTCTAAAGTTTGTAATTAGCAGT
rJMSF038P10+ GACATCTCAACCCTGTAATTTTTGGTAGGCAGCTGGAGTCTAAAGTTTGTAATTAGCAGT
rJMFF033N02+ GACATCTCAACCCTGTAATTTTTGGTAGGCAGCTGGAGTCTAAAGTTTGTAATTAGCAGT
____________________________________________________________
consensus GACATCTCAACCCTGTAATTTTTGGTAGGCAGCTGGAGTCTAAAGTTTGTAATTAGCAGT
. : . : . : . : . : . :
rJMSF020J19+ GATCCATACAACAGCTCATTCTTTTTCCCCGGAAGTTCTTTCCAAAGTCACATTGGAAGA
rJMSF014G12+ GATCCATACAACAGCTCATTCTTTTTCCCCGGAAGTTCTTTCCAAAGTCACATTGGAAGA
rJMSF031H24+ GATCCATACAACAGCTCATTCTTTTTCCCCGGAAGTTCTTTCCAAAGTCACATTGGAAGA
rJMSF038P10+ GATCCATACAACAGCTCATTCTTTTTCCCCGGAAGTTCTTTCCAAAGTCACATTGGAAGA
rJMFF033N02+ GATCCATACAACAGCTCATTCTTTTTCCCCGGAAGTTCTTTCCAAAGTCACATTGGAAGA
____________________________________________________________
consensus GATCCATACAACAGCTCATTCTTTTTCCCCGGAAGTTCTTTCCAAAGTCACATTGGAAGA
. : . : . : . : . : . :
rJMSF020J19+ TGAGAAAATGATTCCTTGGCAATAAAGGCCGCAGCACCTCAGTTGTGCATTTCATTTGGA
rJMSF014G12+ TGAGAAAATGATTCCTTGGCAATAAAGGCCGCAGCACCTCAGTTGTGCATTTCATTTGGA
rJMSF031H24+ TGAGAAAATGATTCCTTGGCAATAAAGGCCGCAGCACCTCAGTTGTGCATTTCATTTGGA
rJMSF038P10+ TGAGAAAATGATTCCTTGGCAATAAAGGCCGCAGCACCTCAGTTGTGCATTTCATTTGGA
rJMFF033N02+ TGAGAAAATGATTCCTTGGCAATAAAGGCCGCAGCACCTCAGTTGTGCATTTCATTTGGA
____________________________________________________________
consensus TGAGAAAATGATTCCTTGGCAATAAAGGCCGCAGCACCTCAGTTGTGCATTTCATTTGGA
. : . : . : . : . : . :
rJMSF020J19+ TACATGAAGAAAGCTGTGGGAATGCGGGATATAAATTGGATTCAAAGAGTTGAGTGATTA
rJMSF014G12+ TACATGAAGAAAGCTGTGGGAATGCGGGATATAAATTGGATTCAAAGAGTTGAGTGATTA
rJMSF031H24+ TACATGAAGAAAGCTGTGGGAATGCGGGATATAAATTGGATTCAAAGAGTTGAGTGATTA
rJMSF038P10+ TACATGAAGAAAGCTGTGGGAATGCGGGATATAAATTGGATTCAAAGAGTTGAGTGATTA
rJMFF033N02+ TACATGAAGAAAGCTGTGGGAATGCGGGATATAAATTGGATTCAAAGAGTTGAGTGATTA
____________________________________________________________
consensus TACATGAAGAAAGCTGTGGGAATGCGGGATATAAATTGGATTCAAAGAGTTGAGTGATTA
. : . : . : . : . : . :
rJMSF020J19+ CAGATGCAGCGTGTTAAAATGTACTATAGGCGACAATT
rJMSF014G12+ CAGATGCAGCGTGTTAAAATGTACTATAGGCGACAATT
rJMSF031H24+ CAGATGCAGCGTGTTAAAATGTACTATAGGCGACAATT
rJMSF038P10+ CAGATGCAGCGTGTTAAAATGTACTATAGGCGACAATTTATTTCTGAATC
rJMFF033N02+ CAGATGCAGCGTGTTAAAATGTACTATAGGCGACAATTTATTTCTGAATCAAGGAAAGAA
____________________________________________________________
consensus CAGATGCAGCGTGTTAAAATGTACTATAGGCGACAATTTATTTCTGAATCAAGGAAAGAA