Contig 004055:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031I10Sequence567003205 (4)ref|XP_009600865.1|197PREDICTED: uncharacterized protein LOC104096230 [Nicotiana tomentosiformis]669004055 (2)ref|XP_009765496.1|122PREDICTED: uncharacterized protein LOC104217040 [Nicotiana sylvestris]
JMFF031K02Sequence567003205 (4)gb|KDP30269.1|3e-55hypothetical protein JCGZ_17051 [Jatropha curcas]141004055 (2)

Alignment

This contig is upended


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rJMFF031I10+                                                             CTGAATGTG
                      ____________________________________________________________
consensus                                                                CTGAATGTG
 
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rJMFF031I10+          GGAACATTAACAAACCTAATGCTTCATTGGCTGCATTTAGCCAGATTGTTCAAGTTCAAG
                      ____________________________________________________________
consensus             GGAACATTAACAAACCTAATGCTTCATTGGCTGCATTTAGCCAGATTGTTCAAGTTCAAG
 
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rJMFF031I10+          CAGAAAGTAATGCATCTTTGAACTTGGGTTCTGTATTTCCCTTGTACTATGGCACCAACT
                      ____________________________________________________________
consensus             CAGAAAGTAATGCATCTTTGAACTTGGGTTCTGTATTTCCCTTGTACTATGGCACCAACT
 
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rJMFF031I10+          TCCAGCCTGAAGTTGCCCAGTTGGGCTTCCAGGAACTGCAAAGCAATGTGATTGTTGGCA
                      ____________________________________________________________
consensus             TCCAGCCTGAAGTTGCCCAGTTGGGCTTCCAGGAACTGCAAAGCAATGTGATTGTTGGCA
 
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rJMFF031I10+          GGCCTGTTTATCCATCAAATGCAGAGCCTGCACAAATCGACCGCTTTCCAAGCTTATTCC
                      ____________________________________________________________
consensus             GGCCTGTTTATCCATCAAATGCAGAGCCTGCACAAATCGACCGCTTTCCAAGCTTATTCC
 
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rJMFF031I10+          ACTCCAGTCTTGATGAAGATGCAGCATCAGATCTAAGGGGGAGATCTCAGGTGGAGTGTG
                      ____________________________________________________________
consensus             ACTCCAGTCTTGATGAAGATGCAGCATCAGATCTAAGGGGGAGATCTCAGGTGGAGTGTG
 
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rJMFF031I10+          ATTTATCGCTGAGGTTAGGTATGTCTTCAGACCATGGCCATGCCCCGCTTTGTGGAAAGG
                      ____________________________________________________________
consensus             ATTTATCGCTGAGGTTAGGTATGTCTTCAGACCATGGCCATGCCCCGCTTTGTGGAAAGG
 
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rJMFF031I10+          CTTCGGCTAGCAGTTGCCATAAGGTGATGCCTCATGATGATTCTCGAGCAAGAGGAAAGT
                      ____________________________________________________________
consensus             CTTCGGCTAGCAGTTGCCATAAGGTGATGCCTCATGATGATTCTCGAGCAAGAGGAAAGT
 
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rJMFF031I10+          TCAGTGGTAAACCTACCATCCAAGGCAGGGAGGTTTGCTTCCTCGGGGCTGAACCTGCCA
                      ____________________________________________________________
consensus             TCAGTGGTAAACCTACCATCCAAGGCAGGGAGGTTTGCTTCCTCGGGGCTGAACCTGCCA
 
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rJMFF031K02+                  TCTGTAATGCATGAGAGTTGGCGAANCAGGGAGGGTAAAGTTCAGAAAGTAG
rJMFF031I10+          CTCATCTCTCTGTAATGCATGAGAGTTGGCGAAACAGGGAGGGTAAAGTTCAGAAAGTAG
                      ____________________________________________________________
consensus             CTCATCTCTCTGTAATGCATGAGAGTTGGCGAAACAGGGAGGGTAAAGTTCAGAAAGTAG
 
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rJMFF031K02+          AATCCTTTCTTAGGAAGCGAAAGATGCCCTNTCGTGAAAATGGAGATGATGGGCAAATTT
rJMFF031I10+          AATCCTTTCTTAGGAAGCGAAAGATGCCCTTTCGTGAAAATGGAGATGATGGGCAAATTT
                      ____________________________________________________________
consensus             AATCCTTTCTTAGGAAGCGAAAGATGCCCTTTCGTGAAAATGGAGATGATGGGCAAATTT
 
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rJMFF031K02+          TCNGGTAAGATGGATCCAACTTTC                                    
rJMFF031I10+          TCTGGTAAGATGGATCCAACTTTCTGCCATTTCATTTGGCCAAATGAGAAGGCCAGGTCT
                      ____________________________________________________________
consensus             TCTGGTAAGATGGATCCAACTTTCTGCCATTTCATTTGGCCAAATGAGAAGGCCAGGTCT