Contig 004050:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN013C21+                                                               ATAAAAAT
JMFN010E19+                                                               ATAAAAAT
JMFS069A05+                                                               ATAAAAAT
JMFN044P02+                                                               ATAAAAAT
JMFN032G21+                                                               ATAAAAAT
JMFN042O12+                                                               ATAAAAAT
JMFN012J08+                                                               ATAAAAAT
JMFS050D11+                                                               ATAAAAAT
JMFN029G09+                                                               ATAAAAAT
JMFN030P14+                                                               ATAAAAAT
JMFS074B09+                                                               ATAAAAAT
                      ____________________________________________________________
consensus                                                                 ATAAAAAT
 
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JMFN013C21+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
JMFN010E19+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
JMFS069A05+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
JMFN044P02+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
JMFN032G21+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
JMFN042O12+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
JMFN012J08+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTAAAC
JMFS050D11+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
JMFN029G09+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATTCCCAAATTATTCAAC
JMFN030P14+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
JMFS074B09+           CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
rJMFF012D10-                  TTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
rJMFF030C11-                     TAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
                      ____________________________________________________________
consensus             CAATTATATTATAATAAATATCACGAATATGTCCAAGGTACAATCCCCAAATTATTCAAC
 
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JMFN013C21+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFN010E19+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFS069A05+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFN044P02+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFN032G21+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFN042O12+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFN012J08+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFS050D11+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFN029G09+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFN030P14+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
JMFS074B09+           AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
rJMFF012D10-          AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
rJMFF030C11-          AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
                      ____________________________________________________________
consensus             AATATCAAAGAATTCATCTCGAAAACCAAAACAGAAAACGAAGCTCTCATATATATTTCC
 
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JMFN013C21+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFN010E19+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFS069A05+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFN044P02+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFN032G21+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFN042O12+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFN012J08+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFS050D11+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFN029G09+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTTGTAATAAATTGAGCG
JMFN030P14+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFS040A07+                               TAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
JMFS074B09+           TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
rJMFF012D10-          TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
rJMFF030C11-          TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
                      ____________________________________________________________
consensus             TTTCAGAAATCTGAAAGGACTAATCTCCAGAGCCATGGCCTGTTCGTAATAAATTGAGCG
 
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JMFN013C21+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFN010E19+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFS069A05+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFN044P02+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFN032G21+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFN042O12+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFN012J08+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFS050D11+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFN029G09+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFN030P14+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFS040A07+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFS074B09+           TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFF012D10+                                    CTTCATAGCTTCCCCGATTTAGNCGNGGAATCCNA
rJMFF012D10-          TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
JMFF030C11+                                                 CCGATTTNGACGAGGAATCCAA
rJMFF030C11-          TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
                      ____________________________________________________________
consensus             TTTTGAACACCAAATAGACGGTGTACTTCATAGCTTCACCGATTTAGACGAGGAATCCAA
 
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JMFN013C21+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFN010E19+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFS069A05+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFN044P02+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFN032G21+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFN042O12+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFN012J08+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFS050D11+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFN029G09+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFN030P14+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFS040A07+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGAAGATAG
JMFS074B09+           ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFF012D10+           ATGCCNGAGCNACGNCGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCNTCGGAGGAAG
rJMFF012D10-          ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
JMFF030C11+           ATGCCNGAGCAACGNCGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATNGGAGGAAG
rJMFF030C11-          ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
                      ____________________________________________________________
consensus             ATGCCAGAGCAACGACGGAGGCCAAAGCGGCGGGAACAAAAGCGACGGCATCGGAGGAAG
 
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JMFN013C21+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFN010E19+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFS069A05+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFN044P02+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFN032G21+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFN042O12+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFN012J08+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFS050D11+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFN029G09+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFN030P14+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFS040A07+           AGAAGCCGGTCCCCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFS074B09+           GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFF012D10+           GGCCG-GGTGCCNCTGCAGGAGGATCANCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
rJMFF012D10-          GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
JMFF030C11+           GGCCG-GGTGCCNCTGCAGGAGGATCANCCGCGGCTGCGCTTTGGACGGCGGAGAGCNCC
rJMFF030C11-          GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
                      ____________________________________________________________
consensus             GGCCG-GGTGCCGCTGCAGGAGGATCAGCCGCGGCTGCGCTTTGGACGGCGGAGAGCGCC
 
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JMFN013C21+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGT                    
JMFN010E19+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFS069A05+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFN044P02+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFN032G21+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFN042O12+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFN012J08+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFS050D11+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTN
JMFN029G09+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFN030P14+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFS040A07+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFS074B09+           ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFF012D10+           CCGAGAGCCNTGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCNTTTTTGTT
rJMFF012D10-          ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
JMFF030C11+           CCGAGAGCCNTGATGAGAGCNGNGAAGAAAACTTTAGCGTTCATTGCCTCCNTTTTTGTT
rJMFF030C11-          ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
                      ____________________________________________________________
consensus             ACGAGAGCCATGATGAGAGCAGCGAAGAAAACTTTAGCGTTCATTGCCTCCATTTTTGTT
 
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JMFN010E19+           TGTTTTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGG        
JMFS069A05+           TG-TTTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFN044P02+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFN032G21+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFN042O12+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFN012J08+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFS050D11+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFN029G09+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFN030P14+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFS040A07+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFS074B09+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
JMFF012D10+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
rJMFF012D10-          TG--TTTTTTTTTTTGNGNGNGTANATAATACANAGTAAAATANAATGATGGATGAGTCA
JMFF030C11+           TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
rJMFF030C11-          TG--TTTTTTTTTTTGNGNGNGTANATAATACAGAGTAAAATANAATGATGGATGAGTCA
                      ____________________________________________________________
consensus             TG--TTTTTTTTTTTGTGTGTGTAGATAATACAGAGTAGAATAGAATGATGGATGAGTCA
 
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JMFS069A05+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAAGGAA                    
JMFN044P02+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAAGGAATGGA                
JMFN032G21+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAAGGAATGG                 
JMFN042O12+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAAG                       
JMFN012J08+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAAG                       
JMFS050D11+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAA                        
JMFN029G09+           AAATCTGTGAAGAAATAGAGAATTTCT                                 
JMFN030P14+           AAATCTGTGAAGAAA                                             
JMFS040A07+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAA                        
JMFS074B09+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAAGGAATGGAG               
JMFF012D10+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAAGGAATGGAGGAAGAATGGAATGGT
rJMFF012D10-          AAATCTGTGAANAAATAAANAATTTCTTTCACAAAAGGAATGGAGGAAAAATGGAATGGT
JMFF030C11+           AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAAGGAATGGAGGAAGAATGGAATGGT
rJMFF030C11-          AAATCTGNGAAAAAATAAANAATTTCTTTCACAAAAGGAATGGAGGAAAAATGGAATGGT
                      ____________________________________________________________
consensus             AAATCTGTGAAGAAATAGAGAATTTCTTTCACAGAAGGAATGGAGGAAGAATGGAATGGT