Contig 004049:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF019P21-                                       ATCTTCAAACTCCATCCTATTCATCGTCTCTT
JMFF029N12-                                           TCAAACTCCATCCTATTCATCGTCTCTT
                      ____________________________________________________________
consensus                                         ATCTTCAAACTCCATCCTATTCATCGTCTCTT
 
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JMFF019P21-           CGCAGTCATCCGTTTTCTTGAAACTCCTCGAGATTATCTTGAAAAAGCCAAAAATGAAGG
JMFF029N12-           CGCAGTCATCCGTTTTCTTGAAACTCCTCGAGATTATCTTGAAAAAGCCAAAAATGAAGG
                      ____________________________________________________________
consensus             CGCAGTCATCCGTTTTCTTGAAACTCCTCGAGATTATCTTGAAAAAGCCAAAAATGAAGG
 
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JMFF019P21-           AAAATACTGAAAACCCATTGGCCCTCAAGTCTCTGAATCACATCTCTATCGTGTGCAGAT
JMFF029N12-           AAAATACTGAAAACCCATTGGCCCTCAAGTCTCTGAATCACATCTCTATCGTGTGCAGAT
                      ____________________________________________________________
consensus             AAAATACTGAAAACCCATTGGCCCTCAAGTCTCTGAATCACATCTCTATCGTGTGCAGAT
 
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JMFF019P21-           CGGTGGAGGAATCGATCGATTTCTACAAGAACATTCTGGGTTTTGTCCCTGTTAGAAGGC
JMFF029N12-           CGGTGGAGGAATCGATCGATTTCTACAAGAACATTCTGGGTTTTGTCCCTGTTAGAAGGC
rJMFF019P21+                                                                     C
rJMFF029N12+                                                          CTGTTAGAAGGC
                      ____________________________________________________________
consensus             CGGTGGAGGAATCGATCGATTTCTACAAGAACATTCTGGGTTTTGTCCCTGTTAGAAGGC
 
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JMFF019P21-           CCGGTTCCTTCAATTTCGATGGAGCTTGGTATGTTATGTTCTT-CCTTCAATTCTTACGT
JMFF029N12-           CCGGTTCCTTCAATTTCGATGGAGCTTGGTATGTTATGTTCTT-CCTTCAATTCTTACGT
rJMFF019P21+          CCGGTTCCTTCAATTTCGATGGAGCTTGGTATGTTATGTTCTTCCCTTCAATTCTTACGT
rJMFF029N12+          CCGGTTCCTTCAATTTCGATGGAGCTTGGTATGTTATGTTCTT-CCTTCAATTCTTACGT
                      ____________________________________________________________
consensus             CCGGTTCCTTCAATTTCGATGGAGCTTGGTATGTTATGTTCTT-CCTTCAATTCTTACGT
 
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JMFF019P21-           TATGGGTCTTTGAATGTTATGTTGTTGGTTTAATTTCTACAAAAACATGCAGGCTGTTTA
JMFF029N12-           TATGGGTCTTTGAATGTTATGTTGTTGGTTTAATTTCTACAAAAACATGCAGGCTGTTTA
rJMFF019P21+          TATGGGTCTTTGAATGTTATGTTGTTGGTTTAATTTCTACAAAAACATGCAGGCTGTTTA
rJMFF029N12+          TATGGGTCTTTGAATGTTATGTTGTTGGTTTAATTTCTACAAAAACATGCAGGCTGTTTA
                      ____________________________________________________________
consensus             TATGGGTCTTTGAATGTTATGTTGTTGGTTTAATTTCTACAAAAACATGCAGGCTGTTTA
 
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JMFF019P21-           GCTATGGAGTTGGAATTCATCTCCTTCAATCTGAAGACCCAGAGAATTTGCCAAAGAAAA
JMFF029N12-           GCTATGGAGTTGGAATTCATCTCCTTCAATCTGAAGACCCAGAGAATTTGCCAAAGAAAA
rJMFF019P21+          GCTATGGAGTTGGAATTCATCTCCTTCAANCTGAAGACCCAGAGAATTTGCCAAAGAAAA
rJMFF029N12+          GCTATGGAGTTGGAATTCATCTCCTTCAATCTGAAGACCCAGAGAATTTGCCAAAGAAAA
                      ____________________________________________________________
consensus             GCTATGGAGTTGGAATTCATCTCCTTCAATCTGAAGACCCAGAGAATTTGCCAAAGAAAA
 
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JMFF019P21-           CCGAAATCAATCCCAAAGATAACCATATCTCCTTCCAGGTAATTTGTTTATTTTTTCCCT
JMFF029N12-           CCGAAATCAATCCCAAAGATAACCATATCTCCTTCCAGGTAATTTGTTTATTTTTTCCCT
rJMFF019P21+          CCGAAATCAATCCCAAAGATAACCATATCTCCTTCCAGGTAATTTGTTTATTTTTTCCCT
rJMFF029N12+          CCGAAATCAATCCCAAAGATAACCATATCTCCTTCCAGGTAATTTGTTTATTTTTTCCCT
                      ____________________________________________________________
consensus             CCGAAATCAATCCCAAAGATAACCATATCTCCTTCCAGGTAATTTGTTTATTTTTTCCCT
 
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JMFF019P21-           TTTCTTAATTATTATATATGATGAGATGAGATATGAAATTATGATTACGATAAAGTTGTG
JMFF029N12-           TTTCTTAATTATTATATATGATGAGATGAGATATGAAATTATGATTACGATAAAGTTGTG
rJMFF019P21+          TTTCTTAATTATTATATATGATGAGATGAGATATGAAATTATGATTACGATAAAGTTGTG
rJMFF029N12+          TTTCTTAATTATTATATATGATGAGATGAGATATGAAATTATGATTACGATAAAGTTGTG
                      ____________________________________________________________
consensus             TTTCTTAATTATTATATATGATGAGATGAGATATGAAATTATGATTACGATAAAGTTGTG
 
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JMFF019P21-           TGTAATGATATAGTGCGAGAGCATAGATGCAGTGGAGAAGAAGCTGAAGGATATGGAAAT
JMFF029N12-           TGTAATGATATAGTGCGAGAGCATAGATGCAGTGGAGAAGAAGCTGAAGGATATGGAAAT
rJMFF019P21+          TGTAATGATATAGTGCGAGAGCATAGATGCAGTGGAGAAGAAGCTGAAGGATATGGAAAT
rJMFF029N12+          TGTAATGATATAGTGCGAGAGCATAGATGCAGTGGAGAAGAAGCTGAAGGATATGGAAAT
                      ____________________________________________________________
consensus             TGTAATGATATAGTGCGAGAGCATAGATGCAGTGGAGAAGAAGCTGAAGGATATGGAAAT
 
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JMFF019P21-           ACAGAACGTGAGGCAAAGGGTG                                      
JMFF029N12-           ACAGAACGTGAGGCAAAGGGTG                                      
rJMFF019P21+          ACAGAACGTGAGGCAAAGGGTGGAAGAAGGAGGGATTTACGTGGATCAGCTTTTCTTTCA
rJMFF029N12+          ACAGAACGTGAGGCAAAGGGTGGAAGAAGGAGGGATTTACGTGGATCAGCTTTTCTTTCA
                      ____________________________________________________________
consensus             ACAGAACGTGAGGCAAAGGGTGGAAGAAGGAGGGATTTACGTGGATCAGCTTTTCTTTCA
 
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rJMFF019P21+          CGACCCCGACGGCTTCATGATAGAGATCTGCAACTGCGACAATCTTCCGGTGGTCCCTCT
rJMFF029N12+          CGACCCCGACGGCTTCATGATAGAGATCTGCAACTGCGACAATCTTCCGGTGGTCCCTCT
                      ____________________________________________________________
consensus             CGACCCCGACGGCTTCATGATAGAGATCTGCAACTGCGACAATCTTCCGGTGGTCCCTCT
 
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rJMFF019P21+          TGCCGGCGAGATGCCCAGGTCATGTTCCAGGCACAATATCCAGATGATGCAATCTAAGCA
rJMFF029N12+          TGCCGGCGAGATGCCCAGGTCATGTTCCAGGCACAATATCCAGATGATGCAATCTAAGCA
                      ____________________________________________________________
consensus             TGCCGGCGAGATGCCCAGGTCATGTTCCAGGCACAATATCCAGATGATGCAATCTAAGCA
 
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rJMFF019P21+          CCAACACATTCATGTCTAGACTCTACATCACCCCAACCCAAATCTTTTCTTGCTCTTCAC
rJMFF029N12+          CCAACACATTCATGTCTAGACTCTACATCACCCCAACCCAAATCTTTTCTTGCTCTTCAC
                      ____________________________________________________________
consensus             CCAACACATTCATGTCTAGACTCTACATCACCCCAACCCAAATCTTTTCTTGCTCTTCAC
 
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rJMFF019P21+          CTAAGAACAGATCAGATGAGATGGAGATTTAGGCATACTCGTATCATTGTATTTGATTAT
rJMFF029N12+          CTAAGAACAGATCAGATGAGATGGAGATTTAGGCATACTCGTATCATTGTATTTGATTAT
                      ____________________________________________________________
consensus             CTAAGAACAGATCAGATGAGATGGAGATTTAGGCATACTCGTATCATTGTATTTGATTAT
 
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rJMFF019P21+          TATGTGTGTTTGGTTTTGTGTTGGTGTTAACAAGACATTAGTTTCGTAAAAGTAAAGTCC
rJMFF029N12+          TATGTGTGTTTGGTTTTGTGTTGGTGTTAACAAGACATTAGTTTCGTAAAAGTAAAGTCC
                      ____________________________________________________________
consensus             TATGTGTGTTTGGTTTTGTGTTGGTGTTAACAAGACATTAGTTTCGTAAAAGTAAAGTCC