Contig 004048:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF003L11+                                                            CTGATTCGAG
                      ____________________________________________________________
consensus                                                               CTGATTCGAG
 
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rJMSF003L11+          TCTTCGATCCGAGCGACGGAACTGTGGGTCTCGTTGAATTGAAGAAAACCGGGTTCTTCC
rJMFF029L16+                ATCCGAGCGACGGAACTGTGGGTCTCGTTGAATTGAAGAAAACCGGGTTCTTCC
                      ____________________________________________________________
consensus             TCTTCGATCCGAGCGACGGAACTGTGGGTCTCGTTGAATTGAAGAAAACCGGGTTCTTCC
 
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rJMSF003L11+          ATTTACTACCGCGGATTGGATTTCTGAAGGCGTCGTCTGAGGAGGCGCCTTACGTGGATA
rJMFF029L16+          ATTTACTACCGCGGATTGGATTTCTGAAGGCGTCGTCTGAGGAGGCGCCTTACGTGGATA
                      ____________________________________________________________
consensus             ATTTACTACCGCGGATTGGATTTCTGAAGGCGTCGTCTGAGGAGGCGCCTTACGTGGATA
 
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rJMSF003L11+          TAATGGAGGCAACGAAATGGTGTTGCGTGGTGGTGACGAATGGGAAGGAGGGTTGCACGG
rJMFF029L16+          TAATGGAGGCAACGAAATGGTGTTGCGTGGTGGTGACGAATGGGAAGGAGGGTTGCACGG
                      ____________________________________________________________
consensus             TAATGGAGGCAACGAAATGGTGTTGCGTGGTGGTGACGAATGGGAAGGAGGGTTGCACGG
 
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rJMSF003L11+          TGTACAGGAAGGATAGAAAGCTGCAGATTGTACCTTTTCCGACGGCTCAAGTTGATCCCA
rJMFF029L16+          TGTACAGGAAGGATAGAAAGCTGCAGATTGTACCTTTTCCGACGGCTCAAGTTGATCCCA
                      ____________________________________________________________
consensus             TGTACAGGAAGGATAGAAAGCTGCAGATTGTACCTTTTCCGACGGCTCAAGTTGATCCCA
 
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rJMSF003L11+          CCGGAGCCGGAGATAGTTTTCTTGGTGGGTTAGTAGCTGGGCTTGTTCATGGATTATCTG
rJMFF029L16+          CCGGAGCCGGAGATAGTTTTCTTGGTGGGTTAGTAGCTGGGCTTGTTCATGGATTATCTG
                      ____________________________________________________________
consensus             CCGGAGCCGGAGATAGTTTTCTTGGTGGGTTAGTAGCTGGGCTTGTTCATGGATTATCTG
 
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rJMSF003L11+          TGCCCGAAGCGGCATTGTTGGGAAACCTCTTCGGGTCGCTCACAGTTGGCCAAATCGGGC
rJMFF029L16+          TGCCCGAAGCGGCATTGTTGGGAAACCTCTTCGGGTCGCTCACAGTTGGCCAAATCGGGC
                      ____________________________________________________________
consensus             TGCCCGAAGCGGCATTGTTGGGAAACCTCTTCGGGTCGCTCACAGTTGGCCAAATCGGGC
 
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rJMSF003L11+          TCTCTAAGTTCGACTCGTGGCAGTTACAGAGAGTGAAGGATGAAAT              
rJMFF029L16+          TCTCTAAGTTCGACTCGTGGCAGTTACAGAGAGTGAAGGATGAAATACAGAGGAGAAGGT
                      ____________________________________________________________
consensus             TCTCTAAGTTCGACTCGTGGCAGTTACAGAGAGTGAAGGATGAAATACAGAGGAGAAGGT
 
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rJMFF029L16+          TACAGAGTTTTGGGTGCCAAGAAAAGCAGGCTGAAGACCCGAAGATAGTGAAGGCAGCAG
                      ____________________________________________________________
consensus             TACAGAGTTTTGGGTGCCAAGAAAAGCAGGCTGAAGACCCGAAGATAGTGAAGGCAGCAG
 
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rJMFF029L16+          ATCTCGAGGTGTTCCACACAGCTCTTAGTGCAGCCAAATCAGTACCAACATACTCTCTTT
                      ____________________________________________________________
consensus             ATCTCGAGGTGTTCCACACAGCTCTTAGTGCAGCCAAATCAGTACCAACATACTCTCTTT