| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028A04 | Sequence | 627 | 004045 (7) | ref|XP_009795844.1| | 78.6 | PREDICTED: uncharacterized protein LOC104242489 [Nicotiana sylvestris] | 731 | 004045 (7) | ref|XP_009795844.1| | 107 | PREDICTED: uncharacterized protein LOC104242489 [Nicotiana sylvestris] |
| JMFF036E10 | Sequence | 242 | 004045 (7) | 625 | 004045 (7) | ref|XP_009795844.1| | 107 | PREDICTED: uncharacterized protein LOC104242489 [Nicotiana sylvestris] | |||
| JMFN009J05 | Sequence | 584 | 004045 (7) | ref|XP_009795844.1| | 107 | PREDICTED: uncharacterized protein LOC104242489 [Nicotiana sylvestris] | |||||
| JMFN033A09 | Sequence | 618 | 004045 (7) | ref|XP_009795844.1| | 107 | PREDICTED: uncharacterized protein LOC104242489 [Nicotiana sylvestris] | |||||
| JMFN044N01 | Sequence | 568 | 004045 (7) | ref|XP_009795844.1| | 107 | PREDICTED: uncharacterized protein LOC104242489 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF028A04- ATTTTGTTTCTA
____________________________________________________________
consensus ATTTTGTTTCTA
. : . : . : . : . : . :
JMFN033A09+ CAAATGACAAGTCATAAGCTATGTGCATACAAGCCATTAC
rJMFF028A04- ACCACCACAAGCTAGAAACACAAATGACAAGTCATAAGCTATGTGCATACAAGCCATTAC
____________________________________________________________
consensus ACCACCACAAGCTAGAAACACAAATGACAAGTCATAAGCTATGTGCATACAAGCCATTAC
. : . : . : . : . : . :
rJMFF036E10- TGTAAATGCAAGGCTATAATATAATCGGGAAAAT
JMFN033A09+ ACAAGAACAAATACTTAGCTTGTACATGTAAATGCAAGGCTATAATATAATCGGGAAAAT
JMFF028A04+ TGTAAATGCAAGGCTATAATATAATCGGGAAAAT
JMFN009J05+ AATATAATCGGGAAAAT
rJMFF028A04- ACAAGAACAAATACTTAGCTTGTACATGTAAATGCAAGGCTATAATATAATCGGGAAAAT
____________________________________________________________
consensus ACAAGAACAAATACTTAGCTTGTACATGTAAATGCAAGGCTATAATATAATCGGGAAAAT
. : . : . : . : . : . :
rJMFF036E10- TAGCATTTAAGGTATATCATAGTCACATTAGGTTTATTGAGACTTGAAAACGGTTGAACA
JMFN033A09+ TAGCATTTAAGGTATATCATAGTCACATTAGGTTTATTGAGACTTGAAAACGGTTGAACA
JMFF028A04+ TAGCATTTAAGGTATATCATAGTCACATTAGGTTTATTGAGACTTGAAAACGGTTGAACA
JMFN009J05+ TAGCATTTAAGGTATATCATAGTTACATTAGGTTTATTGAGACTTGAAAACGGTTGAACA
JMFN044N01+ GTATATCATAGTCACATTAGGTTTATTGAGACTTGAAAACGGTTGAACA
rJMFF028A04- TAGCATTTAAGGTATATCATAGTCACATTAGGTTTATTGAGACTTGAAAACGGTTGAACA
____________________________________________________________
consensus TAGCATTTAAGGTATATCATAGTCACATTAGGTTTATTGAGACTTGAAAACGGTTGAACA
. : . : . : . : . : . :
rJMFF036E10- AACTCGTTTGGCTTGCGAGATTAGATCTTCTCGAGCCGACAACAATCCCTTCGGAGCCAA
JMFN033A09+ AACTCGTTTGGCTTGCGAGATTAGATCTTCTCGAGCCGACAACAATCCCTTCGGAGCCAA
JMFF028A04+ AACTCGTTTGGCTTGCGAGATTAGATCTTCTCGAGCCGACAACAATCCCTTCGGAGCCAA
JMFN009J05+ AACTCGTTTGGCTTGCGAGATTAGATCTTCTCGAGCCGACAACAATCCCTTCGGAGCCAA
JMFN044N01+ AACTCGTTTGGCTTGCGAGATTAGATCTTCTCGAGCCGACAACAATCCCTTCGGAGCCAA
rJMFF028A04- AACTCGTTTGGCTTGCGAGATTAGATCTTCTCGAGCCGACAACAATCCCTTCGGAGCCAA
____________________________________________________________
consensus AACTCGTTTGGCTTGCGAGATTAGATCTTCTCGAGCCGACAACAATCCCTTCGGAGCCAA
. : . : . : . : . : . :
rJMFF036E10- ACAAGCATCAAATGAAGAATAATCCATCCATTCCCTAAGCAAACCCTCCTGCCCCCATTT
JMFN033A09+ ACAAGCATCAAATGAAGAATAATCCATCCATTCCCTAAGCAAACCCTCCTGCCCCCATTT
JMFF028A04+ ACAAGCATCAAATGAAGAATAATCCATCCATTCCCTAAGCAAACCCTCCTGCCCCCATTT
JMFN009J05+ ACAAGCATCAAATGAAGAATAATCCATCCATTCCCTAAGCAAACCCTCCTGCCCCCATTT
JMFN044N01+ ACAAGCATCAAATGAAGAATAATCCATCCATTCCCTAAGCAAACCCTCCTGCCCCCATTT
rJMFF028A04- ACAAGCATCAAATGAAGAATAATCCATCCATTCCCTAAGCAAACCCTCCTGCCCCCATTT
____________________________________________________________
consensus ACAAGCATCAAATGAAGAATAATCCATCCATTCCCTAAGCAAACCCTCCTGCCCCCATTT
. : . : . : . : . : . :
rJMFF036E10- TTCCGGCGGCACCAAAACCCT-CCCCGCCACTTCCGTCCAGTGCCTTTTCAGCTTCTCCC
JMFN033A09+ TTCCGGCGGCACCAAAACCCT-CCCCGCCACTTCCGTCCAGTGCCTTTTCAGCTTCTCCC
JMFF028A04+ TTCCGGCGGCACCAAAACCCTNCCCCGCCACTTCCGTCCAGTGCCTTTTCAGCTTCTCCC
JMFN009J05+ TTCCGGCGGCACCAAAACCCT-CCCCGCCACTTCCGTCCAGTGCCTTTTCAGCTTCTCCC
JMFN044N01+ TTCCGGCGGCACCAAAACCCT-CCCCGCCACTTCCGTCCAGTGCCTTTTCAGCTTCTCCC
rJMFF028A04- TTCCGGCGGCACCAAAACCCT-CCCCGCCACTTCCGTCCAGTGCCTTTTCAGCTTCTCCC
____________________________________________________________
consensus TTCCGGCGGCACCAAAACCCT-CCCCGCCACTTCCGTCCAGTGCCTTTTCAGCTTCTCCC
. : . : . : . : . : . :
rJMFF036E10- GCCCGGAATGCTCCTTCTCCGGCGCCGCCGCAACATTTTCCGGCATTGCCACATCTCTGG
JMFN033A09+ GCCCGGAATGCTCCTTCTCCGGCGCCGCCGCAACATTTTCCGGCATTGCCACATCTCTGG
JMFF028A04+ GCCCGGAATGCTCCTTCTCCGGCGCCGCCGCAACATTTTCCGGCATTGCCACATCTCTGG
JMFN009J05+ GCCCGGAATGCTCCTTCTCCGGCGCCGCCGCAACATTTTCCGGCATTGCCACATCTCTGG
JMFN044N01+ GCCCGGAATGCTCCTTCTCCGGCGCCGCCGCAACATTTTCCGGCATTGCCACATCTCTGG
rJMFF028A04- GCCCGGAATGCTCCTTCTCCGGCGCCGCCGCAACATTTTCCGGCATTGCCACATCTCTGG
____________________________________________________________
consensus GCCCGGAATGCTCCTTCTCCGGCGCCGCCGCAACATTTTCCGGCATTGCCACATCTCTGG
. : . : . : . : . : . :
rJMFF036E10- TGGCAGCCACCGGAGAATCACACTCCATCATCGCGGCCGCCTTCTGAGCTCTGGGTGAGC
JMFN033A09+ TGGCAGCCACCGGAGAATCACACTCCATCATCGCGGCCGCCTTCTGAGCTCTGGGTGAGC
JMFF036E10+ TCTGGGTGAGC
JMFF028A04+ TGGCAGCCACCGGAGAATCACACTCCATCATCGCGGCCGCCTTCTGAGCTCTGGGTGAGC
JMFN009J05+ TGGCAGCCACCGGAGAATCACACTCCATCATCGCGGCCGCCTTCTGAGCTCTGGGTGAGC
JMFN044N01+ TGGCAGCCACCGGAGAATCACACTCCATCATCGCGGCCGCCTTCTGAGCTCTGGGTGAGC
rJMFF028A04- TGGCAGCCACCGGAGAATCACACTCCATCATCGCGGCCGCCTTCTGAGCTCTGGGTGAGC
____________________________________________________________
consensus TGGCAGCCACCGGAGAATCACACTCCATCATCGCGGCCGCCTTCTGAGCTCTGGGTGAGC
. : . : . : . : . : . :
rJMFF036E10- TGACAACCGCGTTGCACCTGTAATCCTTAACGGACGACGACGGTGAAACATCTCCTCCTC
JMFN033A09+ TGACAACCGCGTTGCACCTGTAATCCTTAACGGACGACGACGGTGAAACATCTCCTCCTC
JMFF036E10+ TGACAACCGCGTTGCACCTGTAATCCTTAACGGACGACGACGGTGAAACATCTCCTCCTC
JMFF028A04+ TGACAACCGCGTTGCACCTGTAATCCTTAACGGACGACGACGGTGAAACATCTCCTCCTC
JMFN009J05+ TGACAACCGCGTTGCACCTGTAATCCTTAACGGACGACGACGGTGAAACATCTCCTCCTC
JMFN044N01+ TGACAACCGCGTTGCACCTGTAATCCTTAACGGACGACGACGGTGAAACATCTCCTCCTC
rJMFF028A04- TGACAACCGCGTTGCACCTGTAATCCTTAACGGACGACGACGGTGAAACATCTCCTCCTC
____________________________________________________________
consensus TGACAACCGCGTTGCACCTGTAATCCTTAACGGACGACGACGGTGAAACATCTCCTCCTC
. : . : . : . : . : . :
rJMFF036E10- CTTTTGTCGCCGTCCTTGCCTCCGCCTCCGCCGCCGCCATGACTACGGATCAGTACTCGT
JMFN033A09+ CTTTTGTCGCCGTCCTTGCCTCCGCCTCCGCCGCCGCCATGACTACGGATCAGTACTCGT
JMFF036E10+ CTTTTGTCGCCGTCCTTGCCTCCGCCTCCGCCGCCGCCATGACTACGGATCAGTACTCGT
JMFF028A04+ CTTTTGTCGCCGTCCTTGCCTCCGCCTCCGCCGCCGCCATGACTACGGATCAGTACTCGT
JMFN009J05+ CTTTTGTCGCCGTCCTTGCCTCCGCCTCCGCCGCCGCCATGACTACGGATCAGTACTCGT
JMFN044N01+ CTTTTGTCGCCGTCCTTGCCTCCGCCTCCGCCGCCGCCATGACTACGGATCAGTACTCGT
rJMFF028A04- CTTTTGTCGCCGTCCTTGCCTCCGCCTCCGCCGCCGCCATGACTACGGATCAGTACTCGT
____________________________________________________________
consensus CTTTTGTCGCCGTCCTTGCCTCCGCCTCCGCCGCCGCCATGACTACGGATCAGTACTCGT
. : . : . : . : . : . :
rJMFF036E10- CGAGCTGAAATGAAATAGCATGCAATATAATGCCCTTTTGCCCTGCGGCCCTGCACGTAA
JMFN033A09+ CGAGCTGAAATGAAATAGCATGCAATATAATGCCCTTTT
JMFF036E10+ CGAGCTGAAATGAAATAGCATGCAATATAATGCCCTTTTGCCCTGCGGCCCTGCACGTAA
JMFF028A04+ CGAGCTGAAATGAAATAGCATGCAATATAATGCCCTTTTGCCCTGCGGCCCTGCACGTAA
JMFN009J05+ CGAGCTGAAATGAAATAGCATGCAATATAATGCCCTTTTGCCCTGCGGCCCTGCACGTAA
JMFN044N01+ CGAGCTGAAATGAAA-AGCATGCAATATAATGCCCTTTTGCCCTGCGGCCCTGCACGTAA
rJMFF028A04- CGAGCTGAAATGAAATAGCATGCAATATAATGCCCTTTTGCCCTGCGGCCCTGCACGTAA
____________________________________________________________
consensus CGAGCTGAAATGAAATAGCATGCAATATAATGCCCTTTTGCCCTGCGGCCCTGCACGTAA
. : . : . : . : . : . :
rJMFF036E10- TGAAGCTTCAATTCCTTTCTTTCTCCTTTCAGTATATATAATTCCCAAACT
JMFF036E10+ TGAAGCTTCAATTCCTTTCTTTCTCCTTTCAGTATATATAATTCCCAAACT
JMFF028A04+ TGAAGCTTCAATTCCTTTCTTTCTCCTTTCAGTATATATAATTCCCAAACT
JMFN009J05+ TGAAGCTTCAATTCCTTTCTTTCTCCTT
JMFN044N01+ TGAAGCTTCAATTCCTTTCTTTCTCCTTTCAGTATATATAA
rJMFF028A04- TGAAGCTTCAATTCCTTTCTTTCTCCTTTCAGTATATATAATTCCCAAACTACCGGTTCT
____________________________________________________________
consensus TGAAGCTTCAATTCCTTTCTTTCTCCTTTCAGTATATATAATTCCCAAACTACCGGTTCT