Contig 004039:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004L18Sequence624008802 (5)emb|CDP16085.1|5e-85unnamed protein product [Coffea canephora]754004039 (5)gb|EYU36436.1|2e-99hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]
JMFF026M10Sequence554008802 (5)emb|CDP16085.1|1e-82unnamed protein product [Coffea canephora]669004039 (5)gb|EYU36436.1|6e-69hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]
JMSF017J17Sequence499008802 (5)emb|CDP16085.1|3e-66unnamed protein product [Coffea canephora]806004039 (5)gb|EYU36436.1|3e-110hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]
JMSF036B16Sequence603008802 (5)emb|CDP16085.1|1e-65unnamed protein product [Coffea canephora]736004039 (5)gb|EYU36436.1|4e-105hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]
JMSF047K03Sequence627008802 (5)emb|CDP16085.1|8e-86unnamed protein product [Coffea canephora]743004039 (5)gb|EYU36436.1|4e-101hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata]

Alignment

This contig is upended


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rJMSF017J17+                                                            TGAAGGATGC
                      ____________________________________________________________
consensus                                                               TGAAGGATGC
 
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rJMSF047K03+                                                                  CATG
rJMSF036B16+                                                AACTTCCATATATCTGTCCATG
rJMSF017J17+          AGGGTGTATGTACTTTGGATGTTCAACGTGGTGCTGGAAACTTCCATATATCTGTCCATG
rJMFF004L18+                                                                  CATG
                      ____________________________________________________________
consensus             AGGGTGTATGTACTTTGGATGTTCAACGTGGTGCTGGAAACTTCCATATATCTGTCCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047K03+          GGCTCAACATATTTGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
rJMSF036B16+          GGCTCAACATATTTGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
rJMSF017J17+          GGCTCAACATATTTGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
rJMFF004L18+          GGCTCAACATATTNGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
                      ____________________________________________________________
consensus             GGCTCAACATATTTGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047K03+          ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
rJMSF036B16+          ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
rJMSF017J17+          ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
rJMFF004L18+          ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
rJMFF026M10+                                                             CTCTAGATG
                      ____________________________________________________________
consensus             ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047K03+          GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
rJMSF036B16+          GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
rJMSF017J17+          GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
rJMFF004L18+          GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
rJMFF026M10+          GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
                      ____________________________________________________________
consensus             GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
 
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rJMSF047K03+          CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
rJMSF036B16+          CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
rJMSF017J17+          CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
rJMFF004L18+          CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
rJMFF026M10+          CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
                      ____________________________________________________________
consensus             CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
 
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rJMSF047K03+          AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
rJMSF036B16+          AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
rJMSF017J17+          AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
rJMFF004L18+          AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
rJMFF026M10+          AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
                      ____________________________________________________________
consensus             AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
 
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rJMSF047K03+          ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
rJMSF036B16+          ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
rJMSF017J17+          ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
rJMFF004L18+          ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
rJMFF026M10+          ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
                      ____________________________________________________________
consensus             ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
 
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rJMSF047K03+          CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
rJMSF036B16+          CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
rJMSF017J17+          CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
rJMFF004L18+          CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
rJMFF026M10+          CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
                      ____________________________________________________________
consensus             CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
 
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rJMSF047K03+          TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
rJMSF036B16+          TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
rJMSF017J17+          TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
rJMFF004L18+          TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
rJMFF026M10+          TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
                      ____________________________________________________________
consensus             TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
 
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rJMSF047K03+          GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
rJMSF036B16+          GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
rJMSF017J17+          GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
rJMFF004L18+          GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
rJMFF026M10+          GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
                      ____________________________________________________________
consensus             GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
 
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rJMSF047K03+          GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
rJMSF036B16+          GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
rJMSF017J17+          GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
rJMFF004L18+          GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
rJMFF026M10+          GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
                      ____________________________________________________________
consensus             GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
 
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rJMSF047K03+          TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
rJMSF036B16+          TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
rJMSF017J17+          TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
rJMFF004L18+          TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
rJMFF026M10+          TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
                      ____________________________________________________________
consensus             TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
 
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rJMSF047K03+          TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
rJMSF036B16+          TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTAT      
rJMSF017J17+          TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
rJMFF004L18+          TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
rJMFF026M10+          TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
                      ____________________________________________________________
consensus             TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
 
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rJMSF047K03+          GTCAGGAAAAAAAA                                              
rJMSF017J17+          GTCAGGAAAAAAAA                                              
rJMFF004L18+          GTCAGGAAAAAAAAATGTAACTAAGGAAAT                              
rJMFF026M10+          GTCAGGAAAAAAAAATGTAACTAAGGAAATTTTTTACCCTAATGAACTTTATTCAAATAT
                      ____________________________________________________________
consensus             GTCAGGAAAAAAAAATGTAACTAAGGAAATTTTTTACCCTAATGAACTTTATTCAAATAT