clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004L18 | Sequence | 624 | 008802 (5) | emb|CDP16085.1| | 5e-85 | unnamed protein product [Coffea canephora] | 754 | 004039 (5) | gb|EYU36436.1| | 2e-99 | hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata] |
JMFF026M10 | Sequence | 554 | 008802 (5) | emb|CDP16085.1| | 1e-82 | unnamed protein product [Coffea canephora] | 669 | 004039 (5) | gb|EYU36436.1| | 6e-69 | hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata] |
JMSF017J17 | Sequence | 499 | 008802 (5) | emb|CDP16085.1| | 3e-66 | unnamed protein product [Coffea canephora] | 806 | 004039 (5) | gb|EYU36436.1| | 3e-110 | hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata] |
JMSF036B16 | Sequence | 603 | 008802 (5) | emb|CDP16085.1| | 1e-65 | unnamed protein product [Coffea canephora] | 736 | 004039 (5) | gb|EYU36436.1| | 4e-105 | hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata] |
JMSF047K03 | Sequence | 627 | 008802 (5) | emb|CDP16085.1| | 8e-86 | unnamed protein product [Coffea canephora] | 743 | 004039 (5) | gb|EYU36436.1| | 4e-101 | hypothetical protein MIMGU_mgv1a014341mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
rJMSF017J17+ TGAAGGATGC
____________________________________________________________
consensus TGAAGGATGC
. : . : . : . : . : . :
rJMSF047K03+ CATG
rJMSF036B16+ AACTTCCATATATCTGTCCATG
rJMSF017J17+ AGGGTGTATGTACTTTGGATGTTCAACGTGGTGCTGGAAACTTCCATATATCTGTCCATG
rJMFF004L18+ CATG
____________________________________________________________
consensus AGGGTGTATGTACTTTGGATGTTCAACGTGGTGCTGGAAACTTCCATATATCTGTCCATG
. : . : . : . : . : . :
rJMSF047K03+ GGCTCAACATATTTGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
rJMSF036B16+ GGCTCAACATATTTGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
rJMSF017J17+ GGCTCAACATATTTGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
rJMFF004L18+ GGCTCAACATATTNGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
____________________________________________________________
consensus GGCTCAACATATTTGTTGCTCAAATGATATTTCAAGGGTCTAGTCATGTTAATGTAAGTC
. : . : . : . : . : . :
rJMSF047K03+ ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
rJMSF036B16+ ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
rJMSF017J17+ ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
rJMFF004L18+ ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
rJMFF026M10+ CTCTAGATG
____________________________________________________________
consensus ATATCATCCATGACTTGTCATTTGGTCCAAAATATCCTGGAATTCACAACCCTCTAGATG
. : . : . : . : . : . :
rJMSF047K03+ GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
rJMSF036B16+ GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
rJMSF017J17+ GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
rJMFF004L18+ GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
rJMFF026M10+ GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
____________________________________________________________
consensus GGACAGAGCGGATTCTGCATGCAGGAAGTGGAACTTTCAAATATTATATAAAGATTGTTC
. : . : . : . : . : . :
rJMSF047K03+ CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
rJMSF036B16+ CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
rJMSF017J17+ CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
rJMFF004L18+ CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
rJMFF026M10+ CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
____________________________________________________________
consensus CTACTGAATATAGGTACTTATCAAAGGAAGTTTTACCTACGAATCAATTCTCTGTCTCTG
. : . : . : . : . : . :
rJMSF047K03+ AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
rJMSF036B16+ AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
rJMSF017J17+ AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
rJMFF004L18+ AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
rJMFF026M10+ AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
____________________________________________________________
consensus AGTATTACTCTCTGATACATGAGTTTGATAGGGCGTGGCCAGCTGTGTACTTTCTGTATG
. : . : . : . : . : . :
rJMSF047K03+ ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
rJMSF036B16+ ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
rJMSF017J17+ ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
rJMFF004L18+ ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
rJMFF026M10+ ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
____________________________________________________________
consensus ATTTATCACCAATTACTGTCACCATCAAAGAAGAACGCCGAAGTTTTCTTCACTTCATCA
. : . : . : . : . : . :
rJMSF047K03+ CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
rJMSF036B16+ CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
rJMSF017J17+ CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
rJMFF004L18+ CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
rJMFF026M10+ CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
____________________________________________________________
consensus CTCGACTTTGTGCAGTTCTCGGTGGTACATTTGCTCTAACAGGAATGCTAGACAGATGGA
. : . : . : . : . : . :
rJMSF047K03+ TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
rJMSF036B16+ TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
rJMSF017J17+ TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
rJMFF004L18+ TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
rJMFF026M10+ TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
____________________________________________________________
consensus TGTATAGACTTGTTGAAGCAGTGACGAAGCCAAATGCTAGAAGTACTGTTCGGTAAATTT
. : . : . : . : . : . :
rJMSF047K03+ GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
rJMSF036B16+ GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
rJMSF017J17+ GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
rJMFF004L18+ GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
rJMFF026M10+ GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
____________________________________________________________
consensus GGCCTCACCTGGAGATTGCACGCGGTATTGAACTCACAATGATCAGAAAACTCTAACAGT
. : . : . : . : . : . :
rJMSF047K03+ GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
rJMSF036B16+ GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
rJMSF017J17+ GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
rJMFF004L18+ GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
rJMFF026M10+ GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
____________________________________________________________
consensus GGATGGGAGCAATGACTACTACAATGGAAATTTGATGCTGGACTCTGATGTGCAATTTCT
. : . : . : . : . : . :
rJMSF047K03+ TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
rJMSF036B16+ TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
rJMSF017J17+ TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
rJMFF004L18+ TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
rJMFF026M10+ TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
____________________________________________________________
consensus TCTTTAGCTTTTCTGTGGTTTTGTAATACTCTGTGATTCCAAATATTTTTGCACCTGTTT
. : . : . : . : . : . :
rJMSF047K03+ TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
rJMSF036B16+ TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTAT
rJMSF017J17+ TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
rJMFF004L18+ TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
rJMFF026M10+ TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
____________________________________________________________
consensus TGAGAAGAAAGGCTTTGGCTAATAGCTATGCTAGAATGTTAGATTTTCAATTATTTGCTA
. : . : . : . : . : . :
rJMSF047K03+ GTCAGGAAAAAAAA
rJMSF017J17+ GTCAGGAAAAAAAA
rJMFF004L18+ GTCAGGAAAAAAAAATGTAACTAAGGAAAT
rJMFF026M10+ GTCAGGAAAAAAAAATGTAACTAAGGAAATTTTTTACCCTAATGAACTTTATTCAAATAT
____________________________________________________________
consensus GTCAGGAAAAAAAAATGTAACTAAGGAAATTTTTTACCCTAATGAACTTTATTCAAATAT