Contig 004038:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026L21Sequence487008801 (2)ref|XP_009625008.1|1e-11PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'759004038 (3)emb|CDP15283.1|6e-70unnamed protein product [Coffea canephora]
JMSF003O24Sequence271008801 (2)740004038 (3)ref|XP_009625008.1|7e-79PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
JMSF007P02Sequence282016699ref|XP_011077307.1|3e-47PREDICTED: LOW QUALITY PROTEIN: serine/threonine protein phosphatase 2A 57 kDa 724004038 (3)ref|XP_009792362.1|2e-83PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007P02+ AAAACAAATGCAGTGTATCATCAGCAGTTGTCGTACTGTATTGTCCA
rJMSF003O24+ AATGCAGTGTATCATCAGCAGGTGTCGTACTGTATTGTCCA
                      ____________________________________________________________
consensus AAAACAAATGCAGTGTATCATCAGCAGTTGTCGTACTGTATTGTCCA
 
. : . : . : . : . : . :
rJMSF007P02+ GTTCATGGAGAAGGACTACAAGCTGGCAGATGCTGTTATAAGAGGTTTGTTGAAATACTG
rJMSF003O24+ GNTCATGGAGAAGGACTACAAGCTGGCAGATGCTGTTATAAGAGGTTTGTTGAAATACTG
rJMFF026L21+ GCTGGCAGATGCTGTTATAAGAGGTTTGTTGAAATACTG
                      ____________________________________________________________
consensus GTTCATGGAGAAGGACTACAAGCTGGCAGATGCTGTTATAAGAGGTTTGTTGAAATACTG
 
. : . : . : . : . : . :
rJMSF007P02+ GCCTGTCACAAATTGCCGAAAAGAGGTTCTGTTTCTTGGGGAACTTGAAGAAGTTCTGGA
rJMSF003O24+ GCCTGTCACAAATTGCCGAAAAGAGGTTCTGTTTCTTGGGGAACTTGAAGAAGTTCTGGA
rJMFF026L21+ GCCTGTCACAAATTGCCGAAAAGAGGTTCTGTTTCTTGGGGAACTTGAAGAAGTTCTGGA
                      ____________________________________________________________
consensus GCCTGTCACAAATTGCCGAAAAGAGGTTCTGTTTCTTGGGGAACTTGAAGAAGTTCTGGA
 
. : . : . : . : . : . :
rJMSF007P02+ GGCTACGCAGGTGTCAGAGTTTCAGCGATGCATGGTTCCCCTTTTTAGACAGATAGCTCG
rJMSF003O24+ GGCTACGCAGGTGTCAGAGTTTCAGCGATGCATGGTTCCCCTTTTTAGACAGATAGCTCG
rJMFF026L21+ GGCTACGCAGGTGTCAGAGTTTCAGCGATGCATGGTTCCCCTTTTTAGACAGATAGCTCG
                      ____________________________________________________________
consensus GGCTACGCAGGTGTCAGAGTTTCAGCGATGCATGGTTCCCCTTTTTAGACAGATAGCTCG
 
. : . : . : . : . : . :
rJMSF007P02+ CTGCCTTAACAGTTCACATTCCCAGGTTGCAGAGCGCGCCCTATTCTTGTGGAATAACGA
rJMSF003O24+ CTGCCTTAACAGTTCACATTCCCAGGTTGCAGAGCGCGCCCTATTCTTGGGGAATAACGA
rJMFF026L21+ CTGCCTTAACAGTTCACATTCCCAGGTTGCAGAGCGCGCCCTATTCTTGTGGAATAACGA
                      ____________________________________________________________
consensus CTGCCTTAACAGTTCACATTCCCAGGTTGCAGAGCGCGCCCTATTCTTGTGGAATAACGA
 
. : . : . : . : . : . :
rJMSF007P02+ TCATATAGTAAGCCTGATTGCACAGAACCGGAATGTCATATTGCCAATCATCTTTGAGGC
rJMSF003O24+ TCATATAGTAAGCCTGATTGCACAGAACCGGAATGTCATATTGCCAATCATCTTTGAGGC
rJMFF026L21+ TCATATAGTAAGCCTGATTGCACAGAACCGGAATGTCATATTGCCAATCATCTTTGAGGC
                      ____________________________________________________________
consensus TCATATAGTAAGCCTGATTGCACAGAACCGGAATGTCATATTGCCAATCATCTTTGAGGC
 
. : . : . : . : . : . :
rJMSF007P02+ CATGGAAAAGAACATACAATCTCATTGGAACCAAGCGATCCAAGGGCTGACTGGTAACGT
rJMSF003O24+ CATGGAAAAGAACATACAATCTCATTGGAACCAAGCGATCCAAGGGCTGACTGGTAACGT
rJMFF026L21+ CATGGAAAAGAACATACAATCTCATTGGAACCAAGCGATCCAAGGGCTGACTGGTAACGT
                      ____________________________________________________________
consensus CATGGAAAAGAACATACAATCTCATTGGAACCAAGCGATCCAAGGGCTGACTGGTAACGT
 
. : . : . : . : . : . :
rJMSF007P02+ TCAGAAAATCTTTCTGGAAATGGATTCCGACTTATTCCACGAGTGCCAAAGACAGTATGC
rJMSF003O24+ TCAGAAAATCTTTCTGGAAATGGATTCCGACTTATTCCACGAGTGCCAAAGACAGTATGC
rJMFF026L21+ TCAGAAAATCTTTCTGGAAATGGATTCCGACTTATTCCACGAGTGCCAAAGACAGTATGC
                      ____________________________________________________________
consensus TCAGAAAATCTTTCTGGAAATGGATTCCGACTTATTCCACGAGTGCCAAAGACAGTATGC
 
. : . : . : . : . : . :
rJMSF007P02+ AGAAAGTGCAGCTTGCGCGACAGAACA-GAAGAGCAGCGAGAATTAAGATGGCAGAGATT
rJMSF003O24+ AGAAAGTGCAGCTTGCGCGACAGAACAGGAAGAGCAGCGAGAATTAAGATGGCAGAGATT
rJMFF026L21+ AGAAAGTGCAGCTTGCGCGACAGAACAGGAAGAGCAGCGAGAATTAAGATGGCAGAGATT
                      ____________________________________________________________
consensus AGAAAGTGCAGCTTGCGCGACAGAACAGGAAGAGCAGCGAGAATTAAGATGGCAGAGATT
 
. : . : . : . : . : . :
rJMSF007P02+ AGTAGCCTGCAGCTAAAATGACACGTCACCAAAAACCCGCTCGGTTTAGGAGTAGATGGT
rJMSF003O24+ AGTAGCCTGCAGCTAAAATGACACGTCACCAAAAACCCGCTCGGTTTAGGAGTAGATGGT
rJMFF026L21+ AGTAGCCTGCAGCTAAAATGACACGTCACCAAAAACCCGCTCGGTTTAGGAGTAGATGGT
                      ____________________________________________________________
consensus AGTAGCCTGCAGCTAAAATGACACGTCACCAAAAACCCGCTCGGTTTAGGAGTAGATGGT
 
. : . : . : . : . : . :
rJMSF007P02+ GTGCAGTGTTAAATCGGATGCTCGAATTCATGAGCATATATAGACAACAATGCTATACAA
rJMSF003O24+ GTGCAGTGTTAAATCGGATGCTCGAATTCATGAGCATATATAGACAACAATGCTATACAA
rJMFF026L21+ GTGCAGTGTTAAATCGGATGCTCGAATTCATGAGCATATATAGACAACAATGCTATACAA
                      ____________________________________________________________
consensus GTGCAGTGTTAAATCGGATGCTCGAATTCATGAGCATATATAGACAACAATGCTATACAA
 
. : . : . : . : . : . :
rJMSF007P02+ TCTTGGAAGCATAAGCCATGAAGAACATGCTTTACACTGTAAATGGTACTCTGTTTTAGT
rJMSF003O24+ TCTTGGAAGCATAAGCCATGAAGAACATGCTTTACACTGTAAATGGTACTCTGTTTTAGT
rJMFF026L21+ TCTTGGAAGCATAAGCCATGAAGAACATGCTTTACACTGTAAATGGTACTCTGTTTTAGT
                      ____________________________________________________________
consensus TCTTGGAAGCATAAGCCATGAAGAACATGCTTTACACTGTAAATGGTACTCTGTTTTAGT
 
. : . : . : . : . : . :
rJMSF007P02+ TCTCCCTTTTTT
rJMSF003O24+ TCTCCC-TTTTTTCTTTTTGTTTTCATTGTGCAAAGTGAT
rJMFF026L21+ TCTCCCTTTTTTTCTTTTTGTTTTCATTGTGCAAAGTGATTGATCCACAGCTTAAATTAA
                      ____________________________________________________________
consensus TCTCCCTTTTTTTCTTTTTGTTTTCATTGTGCAAAGTGATTGATCCACAGCTTAAATTAA
 
. : . : . : . : . : . :
rJMFF026L21+ GAATGGTTTGTGAAAGTTTATGTGATATGATAAACTCTTGAATCCATGCCTTTAACATTA
                      ____________________________________________________________
consensus GAATGGTTTGTGAAAGTTTATGTGATATGATAAACTCTTGAATCCATGCCTTTAACATTA