| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026L21 | Sequence | 487 | 008801 (2) | ref|XP_009625008.1| | 1e-11 | PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' | 759 | 004038 (3) | emb|CDP15283.1| | 6e-70 | unnamed protein product [Coffea canephora] |
| JMSF003O24 | Sequence | 271 | 008801 (2) | 740 | 004038 (3) | ref|XP_009625008.1| | 7e-79 | PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' | |||
| JMSF007P02 | Sequence | 282 | 016699 | ref|XP_011077307.1| | 3e-47 | PREDICTED: LOW QUALITY PROTEIN: serine/threonine protein phosphatase 2A 57 kDa | 724 | 004038 (3) | ref|XP_009792362.1| | 2e-83 | PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' |
This contig is upended
. : . : . : . : . : . :
rJMSF007P02+ AAAACAAATGCAGTGTATCATCAGCAGTTGTCGTACTGTATTGTCCA
rJMSF003O24+ AATGCAGTGTATCATCAGCAGGTGTCGTACTGTATTGTCCA
____________________________________________________________
consensus AAAACAAATGCAGTGTATCATCAGCAGTTGTCGTACTGTATTGTCCA
. : . : . : . : . : . :
rJMSF007P02+ GTTCATGGAGAAGGACTACAAGCTGGCAGATGCTGTTATAAGAGGTTTGTTGAAATACTG
rJMSF003O24+ GNTCATGGAGAAGGACTACAAGCTGGCAGATGCTGTTATAAGAGGTTTGTTGAAATACTG
rJMFF026L21+ GCTGGCAGATGCTGTTATAAGAGGTTTGTTGAAATACTG
____________________________________________________________
consensus GTTCATGGAGAAGGACTACAAGCTGGCAGATGCTGTTATAAGAGGTTTGTTGAAATACTG
. : . : . : . : . : . :
rJMSF007P02+ GCCTGTCACAAATTGCCGAAAAGAGGTTCTGTTTCTTGGGGAACTTGAAGAAGTTCTGGA
rJMSF003O24+ GCCTGTCACAAATTGCCGAAAAGAGGTTCTGTTTCTTGGGGAACTTGAAGAAGTTCTGGA
rJMFF026L21+ GCCTGTCACAAATTGCCGAAAAGAGGTTCTGTTTCTTGGGGAACTTGAAGAAGTTCTGGA
____________________________________________________________
consensus GCCTGTCACAAATTGCCGAAAAGAGGTTCTGTTTCTTGGGGAACTTGAAGAAGTTCTGGA
. : . : . : . : . : . :
rJMSF007P02+ GGCTACGCAGGTGTCAGAGTTTCAGCGATGCATGGTTCCCCTTTTTAGACAGATAGCTCG
rJMSF003O24+ GGCTACGCAGGTGTCAGAGTTTCAGCGATGCATGGTTCCCCTTTTTAGACAGATAGCTCG
rJMFF026L21+ GGCTACGCAGGTGTCAGAGTTTCAGCGATGCATGGTTCCCCTTTTTAGACAGATAGCTCG
____________________________________________________________
consensus GGCTACGCAGGTGTCAGAGTTTCAGCGATGCATGGTTCCCCTTTTTAGACAGATAGCTCG
. : . : . : . : . : . :
rJMSF007P02+ CTGCCTTAACAGTTCACATTCCCAGGTTGCAGAGCGCGCCCTATTCTTGTGGAATAACGA
rJMSF003O24+ CTGCCTTAACAGTTCACATTCCCAGGTTGCAGAGCGCGCCCTATTCTTGGGGAATAACGA
rJMFF026L21+ CTGCCTTAACAGTTCACATTCCCAGGTTGCAGAGCGCGCCCTATTCTTGTGGAATAACGA
____________________________________________________________
consensus CTGCCTTAACAGTTCACATTCCCAGGTTGCAGAGCGCGCCCTATTCTTGTGGAATAACGA
. : . : . : . : . : . :
rJMSF007P02+ TCATATAGTAAGCCTGATTGCACAGAACCGGAATGTCATATTGCCAATCATCTTTGAGGC
rJMSF003O24+ TCATATAGTAAGCCTGATTGCACAGAACCGGAATGTCATATTGCCAATCATCTTTGAGGC
rJMFF026L21+ TCATATAGTAAGCCTGATTGCACAGAACCGGAATGTCATATTGCCAATCATCTTTGAGGC
____________________________________________________________
consensus TCATATAGTAAGCCTGATTGCACAGAACCGGAATGTCATATTGCCAATCATCTTTGAGGC
. : . : . : . : . : . :
rJMSF007P02+ CATGGAAAAGAACATACAATCTCATTGGAACCAAGCGATCCAAGGGCTGACTGGTAACGT
rJMSF003O24+ CATGGAAAAGAACATACAATCTCATTGGAACCAAGCGATCCAAGGGCTGACTGGTAACGT
rJMFF026L21+ CATGGAAAAGAACATACAATCTCATTGGAACCAAGCGATCCAAGGGCTGACTGGTAACGT
____________________________________________________________
consensus CATGGAAAAGAACATACAATCTCATTGGAACCAAGCGATCCAAGGGCTGACTGGTAACGT
. : . : . : . : . : . :
rJMSF007P02+ TCAGAAAATCTTTCTGGAAATGGATTCCGACTTATTCCACGAGTGCCAAAGACAGTATGC
rJMSF003O24+ TCAGAAAATCTTTCTGGAAATGGATTCCGACTTATTCCACGAGTGCCAAAGACAGTATGC
rJMFF026L21+ TCAGAAAATCTTTCTGGAAATGGATTCCGACTTATTCCACGAGTGCCAAAGACAGTATGC
____________________________________________________________
consensus TCAGAAAATCTTTCTGGAAATGGATTCCGACTTATTCCACGAGTGCCAAAGACAGTATGC
. : . : . : . : . : . :
rJMSF007P02+ AGAAAGTGCAGCTTGCGCGACAGAACA-GAAGAGCAGCGAGAATTAAGATGGCAGAGATT
rJMSF003O24+ AGAAAGTGCAGCTTGCGCGACAGAACAGGAAGAGCAGCGAGAATTAAGATGGCAGAGATT
rJMFF026L21+ AGAAAGTGCAGCTTGCGCGACAGAACAGGAAGAGCAGCGAGAATTAAGATGGCAGAGATT
____________________________________________________________
consensus AGAAAGTGCAGCTTGCGCGACAGAACAGGAAGAGCAGCGAGAATTAAGATGGCAGAGATT
. : . : . : . : . : . :
rJMSF007P02+ AGTAGCCTGCAGCTAAAATGACACGTCACCAAAAACCCGCTCGGTTTAGGAGTAGATGGT
rJMSF003O24+ AGTAGCCTGCAGCTAAAATGACACGTCACCAAAAACCCGCTCGGTTTAGGAGTAGATGGT
rJMFF026L21+ AGTAGCCTGCAGCTAAAATGACACGTCACCAAAAACCCGCTCGGTTTAGGAGTAGATGGT
____________________________________________________________
consensus AGTAGCCTGCAGCTAAAATGACACGTCACCAAAAACCCGCTCGGTTTAGGAGTAGATGGT
. : . : . : . : . : . :
rJMSF007P02+ GTGCAGTGTTAAATCGGATGCTCGAATTCATGAGCATATATAGACAACAATGCTATACAA
rJMSF003O24+ GTGCAGTGTTAAATCGGATGCTCGAATTCATGAGCATATATAGACAACAATGCTATACAA
rJMFF026L21+ GTGCAGTGTTAAATCGGATGCTCGAATTCATGAGCATATATAGACAACAATGCTATACAA
____________________________________________________________
consensus GTGCAGTGTTAAATCGGATGCTCGAATTCATGAGCATATATAGACAACAATGCTATACAA
. : . : . : . : . : . :
rJMSF007P02+ TCTTGGAAGCATAAGCCATGAAGAACATGCTTTACACTGTAAATGGTACTCTGTTTTAGT
rJMSF003O24+ TCTTGGAAGCATAAGCCATGAAGAACATGCTTTACACTGTAAATGGTACTCTGTTTTAGT
rJMFF026L21+ TCTTGGAAGCATAAGCCATGAAGAACATGCTTTACACTGTAAATGGTACTCTGTTTTAGT
____________________________________________________________
consensus TCTTGGAAGCATAAGCCATGAAGAACATGCTTTACACTGTAAATGGTACTCTGTTTTAGT
. : . : . : . : . : . :
rJMSF007P02+ TCTCCCTTTTTT
rJMSF003O24+ TCTCCC-TTTTTTCTTTTTGTTTTCATTGTGCAAAGTGAT
rJMFF026L21+ TCTCCCTTTTTTTCTTTTTGTTTTCATTGTGCAAAGTGATTGATCCACAGCTTAAATTAA
____________________________________________________________
consensus TCTCCCTTTTTTTCTTTTTGTTTTCATTGTGCAAAGTGATTGATCCACAGCTTAAATTAA
. : . : . : . : . : . :
rJMFF026L21+ GAATGGTTTGTGAAAGTTTATGTGATATGATAAACTCTTGAATCCATGCCTTTAACATTA
____________________________________________________________
consensus GAATGGTTTGTGAAAGTTTATGTGATATGATAAACTCTTGAATCCATGCCTTTAACATTA