Contig 004034:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003N24Sequence555000955 (12)ref|XP_011015557.1|2e-88PREDICTED: selenium-binding protein 1-like [Populus euphratica]700004034 (10)emb|CDP15102.1|1e-113unnamed protein product [Coffea canephora]
JMFF012E15Sequence543000955 (12)ref|XP_011015557.1|2e-86PREDICTED: selenium-binding protein 1-like [Populus euphratica]751004034 (10)emb|CDP15102.1|1e-125unnamed protein product [Coffea canephora]
JMFF023K18Sequence473000955 (12)ref|XP_011015557.1|7e-72PREDICTED: selenium-binding protein 1-like [Populus euphratica]628004034 (10)emb|CDP15102.1|5e-103unnamed protein product [Coffea canephora]
JMFF026D19Sequence537000955 (12)ref|XP_011015557.1|1e-75PREDICTED: selenium-binding protein 1-like [Populus euphratica]745004034 (10)emb|CDP15102.1|3e-113unnamed protein product [Coffea canephora]
JMFF035F08Sequence580000955 (12)ref|XP_011015557.1|1e-87PREDICTED: selenium-binding protein 1-like [Populus euphratica]724004034 (10)emb|CDP15102.1|8e-120unnamed protein product [Coffea canephora]
JMFF035H02Sequence575000955 (12)ref|XP_011015557.1|5e-86PREDICTED: selenium-binding protein 1-like [Populus euphratica]721004034 (10)emb|CDP15102.1|4e-119unnamed protein product [Coffea canephora]
JMFF041M08Sequence633000955 (12)ref|XP_011015557.1|7e-101PREDICTED: selenium-binding protein 1-like [Populus euphratica]611004034 (10)emb|CDP15102.1|3e-87unnamed protein product [Coffea canephora]
JMFF044K03Sequence643000955 (12)ref|XP_011015557.1|3e-113PREDICTED: selenium-binding protein 1-like [Populus euphratica]579004034 (10)emb|CDP15102.1|8e-82unnamed protein product [Coffea canephora]
JMFF050K23Sequence607000955 (12)ref|XP_011015557.1|1e-81PREDICTED: selenium-binding protein 1-like [Populus euphratica]566004034 (10)emb|CDP15102.1|2e-77unnamed protein product [Coffea canephora]
JMSF045M13Sequence778000955 (12)ref|XP_011015557.1|2e-119PREDICTED: selenium-binding protein 1-like [Populus euphratica]752004034 (10)emb|CDP15102.1|1e-133unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF045M13+ CATCTGAAGCGACCGGGTTCGTGG
                      ____________________________________________________________
consensus CATCTGAAGCGACCGGGTTCGTGG
 
. : . : . : . : . : . :
rJMSF045M13+ GGTGTGCATTGACCAGCAACATGGTTCGTTTCTTCAAGAATCCAGATGACTCGTGGAG-C
rJMFF012E15+ CCAGCAACATGGTTCGTTTCTTCAAGAATCCAGATGACTCGTGGAG-C
rJMFF003N24+ GC
rJMFF035H02+ AGAATCCAGATGACTCGTGGAG-C
rJMFF035F08+ AAGAATCCAGATGACTCGTGGAG-C
rJMFF026D19+ AAGAATCCAGATGACTCGTGGAGCC
                      ____________________________________________________________
consensus GGTGTGCATTGACCAGCAACATGGTTCGTTTCTTCAAGAATCCAGATGACTCGTGGAG-C
 
. : . : . : . : . : . :
rJMSF045M13+ CATGAGCTAGCAGTGTCAGTGAAAGCACTGAAAGTCCAGAATTGGATTCTCCCTGAAATG
rJMFF012E15+ CATGAGCTAGCAGTGTCAGTGAAAGCACTGAAAGTCCAGAATTGGATTCTCCCTGAAATG
rJMFF003N24+ CATGAGCTAGCAGTGTCAGTGAAAGCACTGAAAGTCCAGAATTGGATTCTCCCTGAAATG
rJMFF023K18+ GAAATG
rJMFF035H02+ CATGAGCTAGCAGTGTCAGTGAAAGCACTGAAAGTCCAGAATTGGATTCTCCCTGAAATG
rJMFF035F08+ CATGAGCTAGCAGTGTCAGTGAAAGCACTGAAAGTCCAGAATTGGATTCTCCCTGAAATG
rJMFF026D19+ CATGAGCTAGCAGTGTCAGTGAAAGCACTGAAAGTCCAGAATTGGATTCTCCCTGAAATG
                      ____________________________________________________________
consensus CATGAGCTAGCAGTGTCAGTGAAAGCACTGAAAGTCCAGAATTGGATTCTCCCTGAAATG
 
. : . : . : . : . : . :
rJMSF045M13+ CCTGGGCTCATTACTGATTTCCTGATCTCGTTGGATGATCGCTTCCTCTACTTTGCGAAT
rJMFF012E15+ CCTGGGCTCATTACTGATTTCCTGATCTCGTTGGATGATCGCTTCCTCTACTTTGCGAAT
rJMFF003N24+ CCTGGGCTCATTACTGATTTCCTGATCTCGTTGGATGATCGCTTCCTCTACTTTGCGAAT
rJMFF023K18+ CCTGGGCTCATTACTGATTTCCTGATCTCGTTGGATGATCGCTTCCTCTACTTTGCGAAT
rJMFF035H02+ CCTGGGCTCATTACTGATTTCCTGATCTCGTTGGATGATCGCTTCCTCTACTTTGCGAAT
rJMFF035F08+ CCTGGGCTCATTACTGATTTCCTGATCTCGTTGGATGATCGCTTCCTCTACTTTGCGAAT
rJMFF041M08+ TCTACTTTGCGAAT
rJMFF026D19+ CCTGGGCTCATTACTGATTTCCTGATCTCGTTGGATGATCGCTTCCTCTACTTTGCGAAT
                      ____________________________________________________________
consensus CCTGGGCTCATTACTGATTTCCTGATCTCGTTGGATGATCGCTTCCTCTACTTTGCGAAT
 
. : . : . : . : . : . :
rJMSF045M13+ TGGCTGCACGGCGATATTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
rJMFF012E15+ TGGCTGCACGGCGATATTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
rJMFF003N24+ TGGCTGCACGGCGATATTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
rJMFF023K18+ TGGCTGCACGGCGATATTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
rJMFF035H02+ TGGCTGCACGGCGATATTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
rJMFF035F08+ TGGCTGCACGGCGATATTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
rJMFF044K03+ TTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
rJMFF050K23+ ACATCGAGGATCGAGCAAACCCGAAGCTGGCG
rJMFF041M08+ TGGCTGCNCGGCGATATTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
rJMFF026D19+ TGGCTGCACGGCGATATTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
                      ____________________________________________________________
consensus TGGCTGCACGGCGATATTAGACAGTATAACATCGAGGATCGAGCAAACCCGAAGCTGGCG
 
. : . : . : . : . : . :
rJMSF045M13+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
rJMFF012E15+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
rJMFF003N24+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
rJMFF023K18+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
rJMFF035H02+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
rJMFF035F08+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
rJMFF044K03+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
rJMFF050K23+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
rJMFF041M08+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
rJMFF026D19+ GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
                      ____________________________________________________________
consensus GGGCAAGTATGGGTTGGTGGATTGATCCGAAAAGGAAGCTCTGTAGTTGCAGAGGCAGAA
 
. : . : . : . : . : . :
rJMSF045M13+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAAGAAGCTGAGAGGAGGA
rJMFF012E15+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAAGAAGCTGAGAGGAGGA
rJMFF003N24+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAAGAAGCTGAGAGGAGGA
rJMFF023K18+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAATAAGCTGAGAGGAGGA
rJMFF035H02+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAAGAAGCTGAGAGGAGGA
rJMFF035F08+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAAGAAGCTGAGAGGAGGA
rJMFF044K03+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAATAAGCTGAGAGGAGGA
rJMFF050K23+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAAGAAGCTGAGAGGAGGA
rJMFF041M08+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAAGAAGCTGAGAGGAGGA
rJMFF026D19+ GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAAGAAGCTGAGAGGAGGA
                      ____________________________________________________________
consensus GATGGCACAACATACCAGGTGGATGTCCCAGATATCCAGGGAAAGAAGCTGAGAGGAGGA
 
. : . : . : . : . : . :
rJMSF045M13+ CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
rJMFF012E15+ CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
rJMFF003N24+ CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
rJMFF023K18+ CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
rJMFF035H02+ CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
rJMFF035F08+ CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
rJMFF044K03+ CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
rJMFF050K23+ CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
rJMFF041M08+ CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
rJMFF026D19+ CCGCGGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
                      ____________________________________________________________
consensus CCGCAGATGATACAGCTGAGCCTAGACGGGAAGAGGCTATACGCGACAAACTCGCTGTAC
 
. : . : . : . : . : . :
rJMSF045M13+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
rJMFF012E15+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
rJMFF003N24+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
rJMFF023K18+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
rJMFF035H02+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
rJMFF035F08+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
rJMFF044K03+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
rJMFF050K23+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
rJMFF041M08+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
rJMFF026D19+ AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
                      ____________________________________________________________
consensus AGCACCTGGGACAAGCAGTTCTATCCAGATCTGGTGGAGAAAGGCTCCCACATTATACAG
 
. : . : . : . : . : . :
rJMSF045M13+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
rJMFF012E15+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
rJMFF003N24+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
rJMFF023K18+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
rJMFF035H02+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
rJMFF035F08+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
rJMFF044K03+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
rJMFF050K23+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
rJMFF041M08+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
rJMFF026D19+ ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
                      ____________________________________________________________
consensus ATAGATGTGGACACACACAAAGGCGGGCTCTCCATTAACCCTAACTTCTTCGTCGACTTT
 
. : . : . : . : . : . :
rJMSF045M13+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
rJMFF012E15+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
rJMFF003N24+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
rJMFF023K18+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
rJMFF035H02+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
rJMFF035F08+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
rJMFF044K03+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
rJMFF050K23+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
rJMFF041M08+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
rJMFF026D19+ GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
                      ____________________________________________________________
consensus GGAGATGAGCCGGATGGTCCAGCCTTGGCTCATGAGATGAGGTATCCTGGTGGTGACTGC
 
. : . : . : . : . : . :
rJMSF045M13+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
rJMFF012E15+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
rJMFF003N24+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
rJMFF023K18+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
rJMFF035H02+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
rJMFF035F08+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
rJMFF044K03+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
rJMFF050K23+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
rJMFF041M08+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
rJMFF026D19+ ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
                      ____________________________________________________________
consensus ACTTCTGATATCTGGATTTAATCAATAAAGCCTTGTAGCCACTATCCATGGGATATTAGC
 
. : . : . : . : . : . :
rJMSF045M13+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
rJMFF012E15+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
rJMFF003N24+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
rJMFF023K18+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
rJMFF035H02+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
rJMFF035F08+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
rJMFF044K03+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
rJMFF050K23+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
rJMFF041M08+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
rJMFF026D19+ ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
                      ____________________________________________________________
consensus ATTTCATGCATGTTAAATAACCCAGCTGGGATATGCATGTTTAATTTCATCAAACACATG
 
. : . : . : . : . : . :
rJMSF045M13+ TACTCAGTC
rJMFF012E15+ TACTCAGTCCCTGTCTCATGATT
rJMFF003N24+ TACTCAGTCCCTGTCTCATGATT
rJMFF023K18+ TACTCAGTCCCTGTCTCATGAT
rJMFF035H02+ TACTCAGTCCCTGTCTCATGATT
rJMFF035F08+ TACTCAGTCCCTGTCTCATGATTTCTCTAATAATT
rJMFF044K03+ TACTCAGTCCCTGTCTCATGATTTCTCTAATAATTTCAAATAAATGAT
rJMFF050K23+ TACTCAGTCCCTGTCTCATGATTTCTCTAATAATTTCAAATAAATGAT
rJMFF041M08+ TACTCAGTCCCTGTCTCATGATTTCTCTAATAATTTCAAATAAATGAT
rJMFF026D19+ TACTCAGTCCCTGTCTCATGATTTCTCTAATAATTTCAAATAAATGATTACGTCTCCCTT
                      ____________________________________________________________
consensus TACTCAGTCCCTGTCTCATGATTTCTCTAATAATTTCAAATAAATGATTACGTCTCCCTT