Contig 004033:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF035K12+                                CGTGAGCGATCTCATGAAAGGCCAAGGGATCGTGATTA
                      ____________________________________________________________
consensus                                   CGTGAGCGATCTCATGAAAGGCCAAGGGATCGTGATTA
 
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rJMSF035K12+          TAGGGATGAGAGACACAAGGATCGTGATAGAAACAGGGATTATGAGAGAGACCATGGGCG
                      ____________________________________________________________
consensus             TAGGGATGAGAGACACAAGGATCGTGATAGAAACAGGGATTATGAGAGAGACCATGGGCG
 
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rJMSF035K12+          TGATCGTGATAAAGAACGTGATCGAACGCGAGGGCGTAACCATGGTAGGGAGCGTGATCG
rJMSF030N12+                    AAAGAACGTGATCGAACGCGAGGGCGTAACCATGGTAGGGAGCGTGATCG
                      ____________________________________________________________
consensus             TGATCGTGATAAAGAACGTGATCGAACGCGAGGGCGTAACCATGGTAGGGAGCGTGATCG
 
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rJMSF035K12+          TGGGAGAGACCGCGATCATAATCGCGAGAAGGATAGAGGTAGAAGTAGGGACTATGATGT
rJMSF030N12+          TGGGAGAGACCGCGATCATAATCGCGAGAAGGATAGAGGTAGAAGTAGGGACTATGATGT
                      ____________________________________________________________
consensus             TGGGAGAGACCGCGATCATAATCGCGAGAAGGATAGAGGTAGAAGTAGGGACTATGATGT
 
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rJMSF035K12+          TGATGAGCACGAGCATGGCTATTCTCGCGATAGGGACTATGACTACGATCATGAGCATAG
rJMSF030N12+          TGATGAGCACGAGCATGGCTATTCTCGCGATAGGGACTATGACTACGATCATGAGCATAG
rJMFF026C21+                                                       CGATCATGAGCATAG
                      ____________________________________________________________
consensus             TGATGAGCACGAGCATGGCTATTCTCGCGATAGGGACTATGACTACGATCATGAGCATAG
 
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rJMSF035K12+          TTATTATCATGATAGAGACTATGATCACGAGCGGGACAGGCATGATGAAAGGGACAGAAA
rJMSF030N12+          TTATTATCATGATAGAGACTATGATCACGAGCGGGACAGGCANGATGAAAGGGACAGAAA
rJMFF026C21+          TTATTATCATGATAGAGACTATGATCACGAGCGGGACAGGCATGATGAAAGGGACAGAAA
                      ____________________________________________________________
consensus             TTATTATCATGATAGAGACTATGATCACGAGCGGGACAGGCATGATGAAAGGGACAGAAA
 
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rJMSF035K12+          GTATGATCATGGAGAGACCGAGGAAGACCAGGTATGGTATGAACAGTCTAATCATGGACA
rJMSF030N12+          GTATGATCATGGAGAGACCGAGGAAGACCAGGTATGGTATGAACAGTCTAATCATGGACA
rJMFF026C21+          GTATGATCATGGAGAGACCGAGGAAGACCAGGTATGGTATGAACAGTCTAATCATGGACA
                      ____________________________________________________________
consensus             GTATGATCATGGAGAGACCGAGGAAGACCAGGTATGGTATGAACAGTCTAATCATGGACA
 
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rJMSF035K12+          TAAACATTCAAAAGGGGAGCACGACCATGGACATTATGACTATTATGATCATCATAAAGA
rJMSF030N12+          TAAACATTCAAAAGGGGAGCACGACCATGGACATTATGACTATTATGATCATCATAAAGA
rJMFF026C21+          TAAACATTCAAAAGGGGAGCACGACCATGGACATTATGACTATTATGATCATCATAAAGA
                      ____________________________________________________________
consensus             TAAACATTCAAAAGGGGAGCACGACCATGGACATTATGACTATTATGATCATCATAAAGA
 
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rJMSF035K12+          TCATGGTGAGTATGATAATCCAGATGGGCAGGGATATGATGAGAGCTATAAAGACTGACC
rJMSF030N12+          TCATGGTGAGTATGATAATCCAGATGGGCAGGGATATGATGAGAGCTATAAAGACTGACC
rJMFF026C21+          TCATGGTGAGTATGATAATCCAGATGGGCAGGGATATGATGAGAGCTATAAAGACTGACC
                      ____________________________________________________________
consensus             TCATGGTGAGTATGATAATCCAGATGGGCAGGGATATGATGAGAGCTATAAAGACTGACC
 
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rJMSF035K12+          GTGATAATGTTTGATATGATCAAACGGAGTAGGATAATTATGTTTATGACCACGCAACCT
rJMSF030N12+          GTGATAATGTTTGATATGATCAAACGGAGTAGGATAATTATGTTTATGACCACGCAACCT
rJMFF026C21+          GTGATAATGTTTGATATGATCAAACGGAGTAGGATAATTATGTTTATGACCACGCAACCT
                      ____________________________________________________________
consensus             GTGATAATGTTTGATATGATCAAACGGAGTAGGATAATTATGTTTATGACCACGCAACCT
 
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rJMSF035K12+          CTGAATCATCACAAAGGGATCGTGATTATCACCACTCGGGTCTCTCTGGTGAATACAAGT
rJMSF030N12+          NTGAATCATCACAAAGGGATCGTGATTATCACCACTCGGGTCTCTCTGGTGAATACAAGT
rJMFF026C21+          CTGAATCATCACAAAGGGATCGTGATTATCACCACTCGGGTCTCTCTGGTGAATACAAGT
                      ____________________________________________________________
consensus             CTGAATCATCACAAAGGGATCGTGATTATCACCACTCGGGTCTCTCTGGTGAATACAAGT
 
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rJMSF035K12+          ACTAATTATGTAGACTTGTCAAAATGATATTTGCAGTGAATATTGCTGCTGTTGATGTTT
rJMSF030N12+          ACTAATTATGTAGACTTGTCAAAATGATATTTGCAGTGAATATTGCTGCTGTTGANGTTT
rJMFF026C21+          ACTAATTATGTAGACTTGTCAAAATGATATTTGCAGTGAATATTGCTGCTGTTGATGTTT
                      ____________________________________________________________
consensus             ACTAATTATGTAGACTTGTCAAAATGATATTTGCAGTGAATATTGCTGCTGTTGATGTTT
 
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rJMSF035K12+          GCGGAATGTGATTAATGGCCCAAGCAAGCTTAAGGAAGT                     
rJMSF030N12+          GCGGAATGTGATTAATGGCCCAAGCAAGCTTAAGGAAGTTGTTAATCATGAAATAGACTT
rJMFF026C21+          GCGGAATGTGATTAATGGCCCAAGCAAGCTTAAGGAAGTTGTTAATCATGAAATAGACTT
                      ____________________________________________________________
consensus             GCGGAATGTGATTAATGGCCCAAGCAAGCTTAAGGAAGTTGTTAATCATGAAATAGACTT
 
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rJMSF030N12+          GGTTTTCATTTGTGTTATTTCCTGTTCTTAGGACCCCATGGAGGTTTACTGGTTTNTGCT
rJMFF026C21+          GGTTTTCATTTGTGTTATTTCCTGTTCTTAGGACCCCATGGAGGTTTACTGGTTTGTGCT
                      ____________________________________________________________
consensus             GGTTTTCATTTGTGTTATTTCCTGTTCTTAGGACCCCATGGAGGTTTACTGGTTTGTGCT
 
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rJMSF030N12+          TTGATGATTGCTCACCAATTTTGGATGTGTTAAAAA                        
rJMFF026C21+          TTGATGATTGCTCACCAATTTTGGATGTGTTTAAAAACTTTATTATTTCTTTTCAATATC
                      ____________________________________________________________
consensus             TTGATGATTGCTCACCAATTTTGGATGTGTTTAAAAACTTTATTATTTCTTTTCAATATC
 
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rJMFF026C21+          AATCTGCTGATTTTTAAAACTTCTTGTGTTCGGTCAGGTCAGGTGTGCGTGTGTGTTCTT
                      ____________________________________________________________
consensus             AATCTGCTGATTTTTAAAACTTCTTGTGTTCGGTCAGGTCAGGTGTGCGTGTGTGTTCTT
 
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rJMFF026C21+          TCTTTCTTTTAGAAATCCTCTCCTTATTTTTGTAACATGGTATCTGAACTAGTACGATAA
                      ____________________________________________________________
consensus             TCTTTCTTTTAGAAATCCTCTCCTTATTTTTGTAACATGGTATCTGAACTAGTACGATAA