Contig 004031:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002A21+                                               AACTTTTTTGTCAGCTTTTGTTG
rJMFF025M10+                              GGAGCTGTCCGTTCAACAACTTTTTNGTCAGCTTTTGTTG
                      ____________________________________________________________
consensus                                 GGAGCTGTCCGTTCAACAACTTTTTTGTCAGCTTTTGTTG
 
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rJMSF002A21+          GGATCTTTCAGGCAGTCATATGCTTGCATAGAAAGGTTGCAACGAAGGACCATAAGCTTG
rJMFF025M10+          GGATCTTTCAGGCAGTCATATGCTTGCATAGAAAGGTTGCAACGAAGGACCATAAGCTTG
                      ____________________________________________________________
consensus             GGATCTTTCAGGCAGTCATATGCTTGCATAGAAAGGTTGCAACGAAGGACCATAAGCTTG
 
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rJMSF002A21+          TATATTGGGTTGCGGGAGGAGCATCTGGCCTCTCTGTGCTATTAGAGAAAAAAGCAAGAC
rJMFF025M10+          TATATTGGGTTGCGGGAGGAGCATCTGGCCTCTCTGTGCTATTAGAGAAAAAAGCAAGAC
                      ____________________________________________________________
consensus             TATATTGGGTTGCGGGAGGAGCATCTGGCCTCTCTGTGCTATTAGAGAAAAAAGCAAGAC
 
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rJMSF002A21+          GTTCTGAGCTTGCCTTGTATGTTCTTCCACGAGCTGGGGAATCTTTATGGGGTATTCTAG
rJMFF025M10+          GTTCTGAGCTTGCCTTGTATGTTCTTCCACGAGCTGGGGAATCTTTATGGGGTATTCTAG
                      ____________________________________________________________
consensus             GTTCTGAGCTTGCCTTGTATGTTCTTCCACGAGCTGGGGAATCTTTATGGGGTATTCTAG
 
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rJMSF002A21+          TAAATCGCCATTTGATGCCTGATGTCAAGAATACAGAGGTGGCCTTGTTCTGTGCTTGCA
rJMFF025M10+          TAAATCGCCATTTGATGCCTGATGTCAAGAATACAGAGGTGGCCTTGTTCTGTGCTTGCA
                      ____________________________________________________________
consensus             TAAATCGCCATTTGATGCCTGATGTCAAGAATACAGAGGTGGCCTTGTTCTGTGCTTGCA
 
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rJMSF002A21+          TGGGGGGAATCATGTACTACCTGGAGCACGAACCAGACACGATGGCTCCATTCCTGAGGG
rJMFF025M10+          TGGGGGGAATCATGTACTACCTGGAGCACGAACCAGACACGATGGCTCCATTCCTGAGGG
                      ____________________________________________________________
consensus             TGGGGGGAATCATGTACTACCTGGAGCACGAACCAGACACGATGGCTCCATTCCTGAGGG
 
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rJMSF002A21+          GCCTGATTCGCCGATTCCTTGCCAGCAAAATTAGCAACCTTAGTCCTTCATCAAATAGGA
rJMFF025M10+          GCCTGATTCGCCGATTCCTTGCCAGC-AAATTAGCAACCTTAGTCCTTCATCAAATAGGA
                      ____________________________________________________________
consensus             GCCTGATTCGCCGATTCCTTGCCAGCAAAATTAGCAACCTTAGTCCTTCATCAAATAGGA
 
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rJMSF002A21+          GTGCATCTTATACATATCTGCAAGCTCTTGATGCCATGAAGAAACCAAAAGAAAATCAAG
rJMFF025M10+          GTGCATCTTATACATATCTGCAAGCTCTTGATGCCATGAAGAAACCAAAAGAAAATCAAG
                      ____________________________________________________________
consensus             GTGCATCTTATACATATCTGCAAGCTCTTGATGCCATGAAGAAACCAAAAGAAAATCAAG
 
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rJMSF002A21+          ACGCTGAAACTTCAACTACAGAAAAATATAATCTTGAATCCATACCAGGACTCTGAGCTA
rJMFF025M10+          ACGCTGAAACTTCAACTACAGAAAAATATAATCTTGAATCCATACCAGGACTCTGAGCTA
                      ____________________________________________________________
consensus             ACGCTGAAACTTCAACTACAGAAAAATATAATCTTGAATCCATACCAGGACTCTGAGCTA
 
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rJMSF002A21+          TATTCATGTTCGTAAACCCGGCCTGCAGCTCTATTTATATACTCCATATAATTTATAATC
rJMFF025M10+          TATTCATGTTCGTAAACCCGGCCTGCAGCTCTATTTATATACTCCATATAATTTATAATC
                      ____________________________________________________________
consensus             TATTCATGTTCGTAAACCCGGCCTGCAGCTCTATTTATATACTCCATATAATTTATAATC
 
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rJMSF002A21+          TGTCACCGGCAGCAGCAGTGATGCTTAACCCATTCTCATTCAAAGAAAGAGGGTATCAAC
rJMFF025M10+          TGTCACCGGCAGCAGCAGTGATGCTTAACCCATTCTCATTCAAAGAAAGAGGGTATCAAC
                      ____________________________________________________________
consensus             TGTCACCGGCAGCAGCAGTGATGCTTAACCCATTCTCATTCAAAGAAAGAGGGTATCAAC
 
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rJMSF002A21+          AACGACACCAGCGCCTCTTACCTTCCAGAACTGATGGCTCGTTTTGTTGTATTCTGATAG
rJMFF025M10+          AACGACACCAGCGCCTCTTACCTTCCAGAACTGATGGCTCGTTTTGTTGTATTCTGATAG
                      ____________________________________________________________
consensus             AACGACACCAGCGCCTCTTACCTTCCAGAACTGATGGCTCGTTTTGTTGTATTCTGATAG
 
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rJMSF002A21+          AACGGTTGTTTTAACAGCTCAAGACTACGTACTTTACATGATTTATTCCTTCTTCTGACG
rJMFF025M10+          AACGGTTGTTTTAACAGCTCAAGACTACGTACTTTACATGATTTATTCCTTCTTCTGACG
                      ____________________________________________________________
consensus             AACGGTTGTTTTAACAGCTCAAGACTACGTACTTTACATGATTTATTCCTTCTTCTGACG
 
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rJMSF002A21+          TAGTACATTGTCTTTGGATAAAC                                     
rJMFF025M10+          TAGTACATTGTCTTTGGATAAACAGGTATTGTTCATTAAAATGTTTGACTGTATACTAGT
                      ____________________________________________________________
consensus             TAGTACATTGTCTTTGGATAAACAGGTATTGTTCATTAAAATGTTTGACTGTATACTAGT