clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF006I02 | Sequence | 412 | 000136 (3) | ref|XP_009786475.1| | 2e-13 | PREDICTED: uncharacterized protein LOC104234578 isoform X3 [Nicotiana sylvestri | 683 | 004030 (4) | ref|XP_009596796.1| | 2e-109 | PREDICTED: uncharacterized protein LOC104092828 isoform X1 [Nicotiana tomentosi |
JMFF022B20 | Sequence | 686 | 004030 (4) | ref|XP_009596796.1| | 3e-110 | PREDICTED: uncharacterized protein LOC104092828 isoform X1 [Nicotiana tomentosi | |||||
JMFF025L12 | Sequence | 618 | 000136 (3) | ref|XP_009786475.1| | 2e-57 | PREDICTED: uncharacterized protein LOC104234578 isoform X3 [Nicotiana sylvestri | 753 | 004030 (4) | ref|XP_009786472.1| | 4e-122 | PREDICTED: uncharacterized protein LOC104234578 isoform X1 [Nicotiana sylvestri |
JMSF001H07 | Sequence | 366 | 000136 (3) | ref|XP_009596796.1| | 1e-06 | PREDICTED: uncharacterized protein LOC104092828 isoform X1 [Nicotiana tomentosi | 764 | 004030 (4) | ref|XP_009786472.1| | 2e-135 | PREDICTED: uncharacterized protein LOC104234578 isoform X1 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMSF001H07+ GGGCCATTGCATGTTTATGTGGTTCC
____________________________________________________________
consensus GGGCCATTGCATGTTTATGTGGTTCC
. : . : . : . : . : . :
rJMSF001H07+ TTGCGTCTGGAGCATGTCTTAACTTTGTTCGCAGGGGCTCTCTTGGAGAAGCAAGTTGTA
rJMFF025L12+ TTCGCAGGGGCTCTCTTGGAGAAGCAAGTTGTA
____________________________________________________________
consensus TTGCGTCTGGAGCATGTCTTAACTTTGTTCGCAGGGGCTCTCTTGGAGAAGCAAGTTGTA
. : . : . : . : . : . :
rJMSF001H07+ GTAGTTTGTTCGAATTTGGGCATATTATCTGCTTGCATTATGGCCATTATTCCACTGATT
rJMFF022B20+ TGGGCATATTATCTGCTTGCATTATGGCCATTATTCCACTGATT
rJMFF006I02+ TGGGCATATTATCTGCTTGCATTATGGCCATTATTCCACTGATT
rJMFF025L12+ GTAGTTTGTTCGAATTTGGGCATATTATCTGCTTGCATTATGGCCATTATTCCACTGATT
____________________________________________________________
consensus GTAGTTTGTTCGAATTTGGGCATATTATCTGCTTGCATTATGGCCATTATTCCACTGATT
. : . : . : . : . : . :
rJMSF001H07+ CGTCCCTACCAGTGGCAGAGCTTGTTAATGCCGGTTTTGCCAAATGATATGTTGGACTTT
rJMFF022B20+ CGTCCCTACCAGTGGCAGAGCTTGTTAATGCCGGTTTTGCCAAATGATATGTTGGACTTT
rJMFF006I02+ CGTCCCTACCAGTGGCAGAGCTTGTTAATGCCGGTTTTGCCAAATGATATGTTGGACTTT
rJMFF025L12+ CGTCCCTACCAGTGGCAGAGCTTGTTAATGCCGGTTTTGCCAAATGATATGTTGGACTTT
____________________________________________________________
consensus CGTCCCTACCAGTGGCAGAGCTTGTTAATGCCGGTTTTGCCAAATGATATGTTGGACTTT
. : . : . : . : . : . :
rJMSF001H07+ TTGGATGCACCTGTTCCCTATATTGTAGGCGTAAAGAACAAAAACTCTGAATTGCAGTCG
rJMFF022B20+ TTGGATGCACCTGTTCCCTATATTGTAGGCGTAAAGAACAAAAACTCTGAATTGCAGTCG
rJMFF006I02+ TTGGATGCACCTGTTCCCTATATTGTAGGCGTAAAGAACAAAAACTCTGAATTGCAGTCG
rJMFF025L12+ TTGGATGCACCTGTTCCCTATATTGTAGGCGTAAAGAACAAAAACTCTGAATTGCAGTCG
____________________________________________________________
consensus TTGGATGCACCTGTTCCCTATATTGTAGGCGTAAAGAACAAAAACTCTGAATTGCAGTCG
. : . : . : . : . : . :
rJMSF001H07+ AAGTTAACAAATGTTGTTCTTGTAGATGTGAACAAGAATCAGATGAAGTCGCATTCAATA
rJMFF022B20+ AAGTTAACAAATGTTGTTCTTGTAGATGTGAACAAGAATCAGATGAAGTCGCATTCAATA
rJMFF006I02+ AAGTTAACAAATGTTGTTCTTGTAGATGTGAACAAGAATCAGATGAAGTCGCATTCAATA
rJMFF025L12+ AAGTTAACAAATGTTGTTCTTGTAGATGTGAACAAGAATCAGATGAAGTCGCATTCAATA
____________________________________________________________
consensus AAGTTAACAAATGTTGTTCTTGTAGATGTGAACAAGAATCAGATGAAGTCGCATTCAATA
. : . : . : . : . : . :
rJMSF001H07+ CCACAATTACCCCAACAAAAGGAACTATACGCATCCTTAATTTCGTACCATGGAAAACTT
rJMFF022B20+ CCACAATTACCCCAACAAAAGGAACTATACGCATCCTTAATTTCGTACCATGGAAAACTT
rJMFF006I02+ CCACAATTACCCCAACAAAAGGAACTATACGCATCCTTAATTTCGTACCATGGAAAACTT
rJMFF025L12+ CCACAATTACCCCAACAAAAGGAACTATACGCATCCTTAATTTCGTACCATGGAAAACTT
____________________________________________________________
consensus CCACAATTACCCCAACAAAAGGAACTATACGCATCCTTAATTTCGTACCATGGAAAACTT
. : . : . : . : . : . :
rJMSF001H07+ GTGGGAGAGAGTTTCTTGGGAAAGAAAAGGCCAGTTTATGAGTGTACTGATGTGCAGGCT
rJMFF022B20+ GTGGGAGAGAGTTTCTTGGGAAAGAAAAGGCCAGTTTATGAGTGTACTGATGTGCAGGCT
rJMFF006I02+ GTGGGAGANAGTTTCTTGGGAAAGAAAAGGCCAGTTTATGAGTGTACTGATGTGCAGGCT
rJMFF025L12+ GTGGGAGAGAGTTTCTTGGGAAAGAAAAGGCCAGTTTATGAGTGTACTGATGTGCAGGCT
____________________________________________________________
consensus GTGGGAGAGAGTTTCTTGGGAAAGAAAAGGCCAGTTTATGAGTGTACTGATGTGCAGGCT
. : . : . : . : . : . :
rJMSF001H07+ GAAGCTGCTAAGGGTTTCCTAAGAGTGCTGCGGTCTTACCTGGATTCACTTTGTTCTAGT
rJMFF022B20+ GAAGCTGCTAAGGGTTTCCTAAGAGTGCTGCGGTCTTACCTGGATTCACTTTGTTCTAGT
rJMFF006I02+ GAAGCTGCTAAGGGTTTCCTAAGAGTGCTGCGGTCTTACCTGGATTCACTTTGTTCTAGT
rJMFF025L12+ GAAGCTGCTAAGGGTTTCCTAAGAGTGCTGCGGTCTTACCTGGATTCACTTTGTTCTAGT
____________________________________________________________
consensus GAAGCTGCTAAGGGTTTCCTAAGAGTGCTGCGGTCTTACCTGGATTCACTTTGTTCTAGT
. : . : . : . : . : . :
rJMSF001H07+ CTTCGCTGTCACACAATTACCAATGTTCAATCAAATAATGATAAGGTATCATTGCTCTTG
rJMFF022B20+ CTTCGCTGTCACACAATTACCAATGTTCAATCAAATAATGATAAGGTATCATTGCTCTTG
rJMFF006I02+ CTTCGCTGTCACACAATTACCAATGTTCAATCAAATAATGATAAGGTATCATTGCTCTTG
rJMFF025L12+ CTTCGCTGTCACACAATTACCAATGTTCAATCAAATAATGATAAGGTATCATTGCTCTTG
____________________________________________________________
consensus CTTCGCTGTCACACAATTACCAATGTTCAATCAAATAATGATAAGGTATCATTGCTCTTG
. : . : . : . : . : . :
rJMSF001H07+ AAGGACAGTTTCATCGAATCTTTCCCCTATCGAGATCGACCTTTTATGAAGCTCTTCGTG
rJMFF022B20+ AAGGACAGTTTCATCGAATCTTTCCCCTATCGAGATCGACCTTTTATGAAGCTCTTCGTG
rJMFF006I02+ AAGGACAGTTTCATCGAATCTTTCCCCTATCGAGATCGACCTTTTATGAAGCTCTTCGTG
rJMFF025L12+ AAGGACAGTTTCATCGAATCTTTCCCCTATCGAGATCGACCTTTTATGAAGCTCTTCGTG
____________________________________________________________
consensus AAGGACAGTTTCATCGAATCTTTCCCCTATCGAGATCGACCTTTTATGAAGCTCTTCGTG
. : . : . : . : . : . :
rJMSF001H07+ GACACACAACTCTTCTCCGTACATACAGATTTTGTACTTTCTTTCTTCCAAAAAGAATAG
rJMFF022B20+ GACACACAACTCTTCTCCGTACATACAGATTTTGTACTTTCTTTCTTCCAAAAAGAATAG
rJMFF006I02+ GACACACAACTCTTCTCCGTACATACAGATTTTGTACTTTCTTTCTTCCAAAAAGAATAG
rJMFF025L12+ GACACACAACTCTTCTCCGTACATACAGATTTTGTACTTTCTTTCTTCCAAAAAGAATAG
____________________________________________________________
consensus GACACACAACTCTTCTCCGTACATACAGATTTTGTACTTTCTTTCTTCCAAAAAGAATAG
. : . : . : . : . : . :
rJMSF001H07+ GGCGATGTACAAGGTTGTTTGGCAGTGTGACAGTGGAACGCAAGTTCTATTGCAATCTGT
rJMFF022B20+ GGCGATGTACAAGGTTGTTTGGCAGTGTGACAGTGGAACGCAAGTTCTATTGCAATCTGT
rJMFF006I02+ GGCGATGTACAAGGTTGTTTGGCAGTGTGACAGTGGAACGCAAGTTCTATTGCAATCTGT
rJMFF025L12+ GGCGATGTACAAGGTTGTTTGGCAGTGTGACAGTGGAACGCAAGTTCTATTGCAATCTGT
____________________________________________________________
consensus GGCGATGTACAAGGTTGTTTGGCAGTGTGACAGTGGAACGCAAGTTCTATTGCAATCTGT
. : . : . : . : . : . :
rJMSF001H07+ ATTATCATTATATGATTA
rJMFF022B20+ ATTATCATTATATGATTAGTATTAGTATTATTCTTAACA
rJMFF006I02+ ATTATCATTATATGATTAGTATTAGTATTATTCTTAACA
rJMFF025L12+ ATTATCATTATATGATTAGTATTAGTATTATTCTTAACATAAAATTTTTGTTTAATCATA
____________________________________________________________
consensus ATTATCATTATATGATTAGTATTAGTATTATTCTTAACATAAAATTTTTGTTTAATCATA