Contig 004029:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF025G10-                                                         CTTGTGGGCCTGC
                      ____________________________________________________________
consensus                                                            CTTGTGGGCCTGC
 
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rJMFF025G10-          TGTTTTTATTTATTTAGCACTGCAATTAAAATACTCCCTACTGGCTAGTGGCGACTACTA
                      ____________________________________________________________
consensus             TGTTTTTATTTATTTAGCACTGCAATTAAAATACTCCCTACTGGCTAGTGGCGACTACTA
 
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JMFS147B07+                          GCAAAAAGATTTACTCTTTAACTCTTAAAGGGTAAGGGAAAGAAG
rJMFF025G10-          ATACTATAGCAGTGTGCAAAAAGATTTACTCTTTAACTCTTAAAGGGTAAGGGAAAGAAG
                      ____________________________________________________________
consensus             ATACTATAGCAGTGTGCAAAAAGATTTACTCTTTAACTCTTAAAGGGTAAGGGAAAGAAG
 
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JMFS147B07+           AACCCAGGCAGGCTGGGTATAGGACGGACTATAGATTAAGCTAAGGTTATTAAATAAACT
rJMFF025G10-          AACCCAGGCAGGCTGGGTATAGGACGGACTATAGATTAAGCTAAGGTTATTAAATAAACT
                      ____________________________________________________________
consensus             AACCCAGGCAGGCTGGGTATAGGACGGACTATAGATTAAGCTAAGGTTATTAAATAAACT
 
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JMFS147B07+           AAAACCAACCATAAAATTTGATCTCACTTCAAACATTTGAGGGAGCCTACTGCCTATACA
rJMFF025G10-          AAAACCAACCATAAAATTTGATCTCACTTCAAACATTTGAGGGAGCCTACTGCCTATACA
                      ____________________________________________________________
consensus             AAAACCAACCATAAAATTTGATCTCACTTCAAACATTTGAGGGAGCCTACTGCCTATACA
 
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JMFS147B07+           ATAAGTTGGCAATCTGTTTCATCCTTTTCTCTTGGCAAGATCTGAAAATAGATAGTAGTG
rJMFF025G10-          ATAAGTTGGCAATCTGTTTCATCCTTTTCTCTTGGCAAGATCTGAAAATAGATAGTAGTG
                      ____________________________________________________________
consensus             ATAAGTTGGCAATCTGTTTCATCCTTTTCTCTTGGCAAGATCTGAAAATAGATAGTAGTG
 
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JMFS147B07+           AATGGCGATGGGCTAGTTCGGAATGCATGATTTCTGATCCTGTTGTCAGCAGTGATTGTA
rJMFF025G10-          AATGGCGATGGGCTAGTTCGGAATGCATGATTTCTGATCCTGTTGTCAGCAGTGATTGTA
                      ____________________________________________________________
consensus             AATGGCGATGGGCTAGTTCGGAATGCATGATTTCTGATCCTGTTGTCAGCAGTGATTGTA
 
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JMFS147B07+           GTAAACCTCACCACTGATACTTTGCAGCAACAAGAACTTCCTCGTACTTCTCGGCAGCGT
rJMFF025G10-          GTAAACCTCACCACTGATACTTTGCAGCAACAAGAACTTCCTCGTACTTCTCGGCAGCGT
                      ____________________________________________________________
consensus             GTAAACCTCACCACTGATACTTTGCAGCAACAAGAACTTCCTCGTACTTCTCGGCAGCGT
 
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JMFS147B07+           GATCCCAGCTTAAGTCTTGCATCATTCCACGCCTCTGGAGCCCCTCCCAACTCTGCTTGT
rJMFF025G10-          GATCCCAGCTTAAGTCTTGCATCATTCCACGCCTCTGGAGCCCCTCCCAACTCTGCTTGT
                      ____________________________________________________________
consensus             GATCCCAGCTTAAGTCTTGCATCATTCCACGCCTCTGGAGCCCCTCCCAACTCTGCTTGT
 
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JMFS147B07+           ACTGCCGGTATGTTAATAAGCAATTCCCTAGTGCATCAATCAGCTGATTTGCCTCAGCCC
rJMFF025G10-          ACTGCCGGTATGTTAATAAGCAATTCCCTAGTGCATCAATCAGCTGATTTGCCTCAGCCC
                      ____________________________________________________________
consensus             ACTGCCGGTATGTTAATAAGCAATTCCCTAGTGCATCAATCAGCTGATTTGCCTCAGCCC
 
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JMFS147B07+           TACTGAATGTCCATCCATGCCCTGATTCATTGAAAGGATCAAAAGGCTGCACCGTATCTC
rJMFF025G10-          TACTGAATGTCCATCCATGCCCTGATTCATTGAAAGGATCAAAAGGCTGCACCGTATCTC
                      ____________________________________________________________
consensus             TACTGAATGTCCATCCATGCCCTGATTCATTGAAAGGATCAAAAGGCTGCACCGTATCTC
 
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JMFS147B07+           TAAGTCCACCCACAGCATGGACAACTGGGACTGTCCCGTAGCTCATAGCATACAGCTGGT
rJMFF025G10-          TAAGTCCACCCACAGCATGGACAACTGGGACTGTCCCGTAGCTCATAGCATACAGCTGGT
                      ____________________________________________________________
consensus             TAAGTCCACCCACAGCATGGACAACTGGGACTGTCCCGTAGCTCATAGCATACAGCTGGT
 
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JMFS147B07+           TC                                                          
rJMFF025G10-          TCANTCCACAAGGCTCAAATCTTGATGGCATCAGCAGAATGTCTGCACCGGCAGTTATCC
                      ____________________________________________________________
consensus             TCANTCCACAAGGCTCAAATCTTGATGGCATCAGCAGAATGTCTGCACCGGCAGTTATCC
 
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rJMFF025G10-          GGTGTGCAGTCTTTACTGAGAAACCAACCCATCCTCTGACTTTGTCACTGTATTGACCTT
                      ____________________________________________________________
consensus             GGTGTGCAGTCTTTACTGAGAAACCAACCCATCCTCTGACTTTGTCACTGTATTGACCTT