Contig 004026:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024M05Sequence485017360ref|XP_009628885.1|4e-44PREDICTED: probable inactive receptor kinase At4g23740 [Nicotiana tomentosiform748004026 (3)emb|CDP05105.1|6e-84unnamed protein product [Coffea canephora]
JMSF037I22Sequence657004026 (3)ref|XP_006350601.1|1e-86PREDICTED: probable inactive receptor kinase At4g23740-like isoform X1 [Solanum637004026 (3)ref|XP_006350601.1|1e-98PREDICTED: probable inactive receptor kinase At4g23740-like isoform X1 [Solanum

Alignment

This contig is upended


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JMSF037I22-                                                     CGTAGATTCCATGGTTCA
                      ____________________________________________________________
consensus                                                       CGTAGATTCCATGGTTCA
 
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JMSF037I22-           GCTTTTTCTGGTAATCATCTTTCTCCAGTTCCTATTTTTATTTCTCCCAGTGCTTCACCA
                      ____________________________________________________________
consensus             GCTTTTTCTGGTAATCATCTTTCTCCAGTTCCTATTTTTATTTCTCCCAGTGCTTCACCA
 
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JMSF037I22-           AAACATAAGTCCAGAAAGCTTAGTCAATCTGCAATGCTGGGAATTGTGATTGGAGGTTGT
                      ____________________________________________________________
consensus             AAACATAAGTCCAGAAAGCTTAGTCAATCTGCAATGCTGGGAATTGTGATTGGAGGTTGT
 
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JMSF037I22-           GCTTTGGGGTTTCTTGTAATCGCGGTCCCGTTCATTCTTTGCTATTCAAAGAAAGAAGAT
                      ____________________________________________________________
consensus             GCTTTGGGGTTTCTTGTAATCGCGGTCCCGTTCATTCTTTGCTATTCAAAGAAAGAAGAT
 
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JMSF037I22-           AAAAGTTTGGCCTCACCAAACTCGCTTAGAAAAAGTGGTTCTCTCGGGAAGGCAGCTTTT
                      ____________________________________________________________
consensus             AAAAGTTTGGCCTCACCAAACTCGCTTAGAAAAAGTGGTTCTCTCGGGAAGGCAGCTTTT
 
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JMSF037I22-           GGCAGTACGGATGGAGGTGGTAACATGGTATTCTTTGAAGGCTGTCATCTTGCCTTTGAT
                      ____________________________________________________________
consensus             GGCAGTACGGATGGAGGTGGTAACATGGTATTCTTTGAAGGCTGTCATCTTGCCTTTGAT
 
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JMSF037I22-           CTCGAAGATTTGTTGAGAGCTTCTGCAGAGATCCTAGGGAAAGGGGCATCTGGGGTTGTG
                      ____________________________________________________________
consensus             CTCGAAGATTTGTTGAGAGCTTCTGCAGAGATCCTAGGGAAAGGGGCATCTGGGGTTGTG
 
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JMSF037I22-           TATAAGGCAGCTTTGGAGGATGCAACCACGGTTGTGGTGAAGAGATTGAAGGAAGTGAGT
                      ____________________________________________________________
consensus             TATAAGGCAGCTTTGGAGGATGCAACCACGGTTGTGGTGAAGAGATTGAAGGAAGTGAGT
 
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JMSF037I22-           GTCGGGAGAAAAGAATTCGAGCAACATTTGGAGGTTGTCGGTAACATTAGGCACGAGAAT
                      ____________________________________________________________
consensus             GTCGGGAGAAAAGAATTCGAGCAACATTTGGAGGTTGTCGGTAACATTAGGCACGAGAAT
 
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JMSF037I22-           GTGGCTCCTTTGCGGGCGTACTTCTACTCCAAGGATGAAAAGCTCATGGTGTACGATTAT
rJMFF024M05+                                        AAGGATGAAAAGCTCATGGTGTACGATTAT
                      ____________________________________________________________
consensus             GTGGCTCCTTTGCGGGCGTACTTCTACTCCAAGGATGAAAAGCTCATGGTGTACGATTAT
 
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JMSF037I22-           TACAGCCAGGGTAGTGTATCAGCAATGCTGCATGATATCAGGCGTGAGAGGCGGTCTCCT
rJMFF024M05+          TACAGCCAGGGTAGTGTATCAGCAATGCTGCATGATATCAGGCGTGAGAGGCGGTCTCCT
                      ____________________________________________________________
consensus             TACAGCCAGGGTAGTGTATCAGCAATGCTGCATGATATCAGGCGTGAGAGGCGGTCTCCT
 
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JMSF037I22-           TTAGATTGGGAAACACGTGTGCAAATTGCGGTCGGTGC                      
rJMSF037I22+                         CGTGTGCAAATTGCGGTCGGTGCAGCAAGAGGCATTGCCTACATC
rJMFF024M05+          TTAGATTGGGAAACACGTGTGCAAATTGCGGTCGGTGC-GCAAGAGGCATTGCCTACATC
                      ____________________________________________________________
consensus             TTAGATTGGGAAACACGTGTGCAAATTGCGGTCGGTGCAGCAAGAGGCATTGCCTACATC
 
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rJMSF037I22+          CACAGACAAAGCGGGGGGAGGCTTGTTCATGGGAATATCAAATCATCGAACATATTCCTC
rJMFF024M05+          CACAGACAAAGCGGGGGGAGGCTTGTTCATGGGAATATC-AATCATCGAACATATTCCTC
                      ____________________________________________________________
consensus             CACAGACAAAGCGGGGGGAGGCTTGTTCATGGGAATATCAAATCATCGAACATATTCCTC
 
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rJMSF037I22+          AACTCCCAACACTACGGTTGTGTCTCTGATCTCGGCCTGGCAACGCTAATAGCTCCCATG
rJMFF024M05+          AACTCCCAACACTACGGTTGTGTCTCTGATCTCGGCCTGGCAACGCTAATAGCTCCCATG
                      ____________________________________________________________
consensus             AACTCCCAACACTACGGTTGTGTCTCTGATCTCGGCCTGGCAACGCTAATAGCTCCCATG
 
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rJMSF037I22+          TCTGCCCCTCTCGCTCAAACTGCAGGGTACTGTCCCCCCGAGGTTACAGACACGAGGAAA
rJMFF024M05+          TCTGCCCCTCTCGCTCAAACTGCAGGGTACTGTCCCCCCGAGGTTACAGACACGAGGAAA
                      ____________________________________________________________
consensus             TCTGCCCCTCTCGCTCAAACTGCAGGGTACTGTCCCCCCGAGGTTACAGACACGAGGAAA
 
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rJMSF037I22+          GCCACCCAGGCATCNGACGTNTACAGCTTTGGGGTCTTGCTGCTCGAACTCCTAACGGGA
rJMFF024M05+          GCCACCCAGGCATCCGACGTCTACAGCTTTGGGGTCTTGCTGCTCGAACTCCTAACGGGA
                      ____________________________________________________________
consensus             GCCACCCAGGCATCCGACGTCTACAGCTTTGGGGTCTTGCTGCTCGAACTCCTAACGGGA
 
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rJMSF037I22+          AAATCCCCGATGCATGCCACAGGGGGGGACGAGTTTGTGCACATAGTAAGATGGGTGCAC
rJMFF024M05+          AAATCCCCGATGCATGCCACAGGGGGGGACGAGTTTGTGCACATAGTAAGATGGGTGCAC
                      ____________________________________________________________
consensus             AAATCCCCGATGCATGCCACAGGGGGGGACGAGTTTGTGCACATAGTAAGATGGGTGCAC
 
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rJMSF037I22+          TCTGTGGTTCGCGAGGAGTGGACTGCGGAAGTGTTTGATATCGTGCTTTTGCGGTCTCCC
rJMFF024M05+          TCTGTGGTTCGCGAGGAGTGGACTGCGGAAGTGTTTGATATCGTGCTTTTGCGGTCTCCC
                      ____________________________________________________________
consensus             TCTGTGGTTCGCGAGGAGTGGACTGCGGAAGTGTTTGATATCGTGCTTTTGCGGTCTCCC
 
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rJMSF037I22+          AACATCGAGGAAGAGATGGTGGAGATGCTGCAAATCGGGATGAACTGNGTAGCCAGATTG
rJMFF024M05+          AACATCGAGGAAGAGATGGTGGAGATGCTGCAAATCGGGATGAACTGCGTAGCCAGATTG
                      ____________________________________________________________
consensus             AACATCGAGGAAGAGATGGTGGAGATGCTGCAAATCGGGATGAACTGCGTAGCCAGATTG
 
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rJMSF037I22+          CCGGATCAGCGGCCGAGAATGGCAGAAGTAGTGAAGATGGTGGAGGGCATTAGAAAGATG
rJMFF024M05+          CCGGATCAGCGGCCGAGAATGGCAGAAGTAGTGAAGATGGTGGAGGGCATTAGAAAGATG
                      ____________________________________________________________
consensus             CCGGATCAGCGGCCGAGAATGGCAGAAGTAGTGAAGATGGTGGAGGGCATTAGAAAGATG
 
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rJMSF037I22+          AATTCTGGAAATCAGACAGAAAGCTCAACTCCAACTCTTCACACTCCTCCCATACTTGAA
rJMFF024M05+          AATTCTGGAAATCAGACAGAAAGCTCAACTCCAACTCTTCACACTCCTCCCATACTTGAA
                      ____________________________________________________________
consensus             AATTCTGGAAATCAGACAGAAAGCTCAACTCCAACTCTTCACACTCCTCCCATACTTGAA
 
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rJMSF037I22+          ATAGGGTCTTCATATCCACATTGAGTTTATGTTTCATA                      
rJMFF024M05+          ATAGGGTCTTCATATCCACATTGAGTTTATGTTTCATACTGTGTATAAACTTGTAATTTT
                      ____________________________________________________________
consensus             ATAGGGTCTTCATATCCACATTGAGTTTATGTTTCATACTGTGTATAAACTTGTAATTTT