Contig 004021:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023F01Sequence268012013 (2)678004021 (2)ref|XP_006356294.1|4e-83PREDICTED: maltose excess protein 1-like, chloroplastic-like isoform X1 [Solanu
JMSF033E15Sequence658004021 (2)ref|XP_006356294.1|2e-99PREDICTED: maltose excess protein 1-like, chloroplastic-like isoform X1 [Solanu755002914 (31)emb|CDX83340.1|4e-114BnaA03g21660D [Brassica napus]

Alignment

This contig is upended


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JMSF033E15+                                                  CTCTGCACTTCCACAAGTCAT
                      ____________________________________________________________
consensus                                                    CTCTGCACTTCCACAAGTCAT
 
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JMSF033E15+           GTGGTCAACCTTCCTCCCATATGTTCCAAACACAATCTTGCCGGGTGCAATATCTTTTGT
rJMFF023F01+                                                    GGGTGCAATATCTTTTGT
                      ____________________________________________________________
consensus             GTGGTCAACCTTCCTCCCATATGTTCCAAACACAATCTTGCCGGGTGCAATATCTTTTGT
 
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JMSF033E15+           AATGGCAGTGACAGCTGTGCTTATGGCTCGCATGGGTAAACTGTCAGAGCAAGGTGTCAA
rJMFF023F01+          AATGGCAGTGACAGCTGTGCTTATGGCTCGCATGGGTAAACTGTCAGAGCAAGGTGTCAA
                      ____________________________________________________________
consensus             AATGGCAGTGACAGCTGTGCTTATGGCTCGCATGGGTAAACTGTCAGAGCAAGGTGTCAA
 
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JMSF033E15+           ATTCATTGCATCACTATCTGGGTGGACTGCCACTCTTCTTTTTATGTGGATGCCAGTTGC
rJMFF023F01+          ATTCATTGCATCACTATCTGGGTGGACTGCCACTCTTCTTTTTATGTGGATGCCAGTTGC
                      ____________________________________________________________
consensus             ATTCATTGCATCACTATCTGGGTGGACTGCCACTCTTCTTTTTATGTGGATGCCAGTTGC
 
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JMSF033E15+           ACAAATGTGGACAAATATTCTTAATCCTGATAACATCAAGGGTTTATCTGCTGTCTCAAT
rJMFF023F01+          ACAAATGTGGACAAATATTCTTAATCCTGATAACATCAAGGGTTTATCTGCTGTCTCAAT
                      ____________________________________________________________
consensus             ACAAATGTGGACAAATATTCTTAATCCTGATAACATCAAGGGTTTATCTGCTGTCTCAAT
 
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JMSF033E15+           GTTGCTGGCCATGATTGGGAATGGACTAATGATTCCTCGAGCACTCCTTACTCGGGACTT
rJMFF023F01+          GTTGCTGGCCATGATTGGGAATGGACTAATGATTCCTCGAGCACTCCTTACTCGGGACTT
                      ____________________________________________________________
consensus             GTTGCTGGCCATGATTGGGAATGGACTAATGATTCCTCGAGCACTCCTTACTCGGGACTT
 
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JMSF033E15+           CATGTGGTTCGCAGGTTCTAGTTGGGCGTGCATTTTTTATGGATGGGGAAATCTTGTTTG
rJMFF023F01+          CATGTGGTTCGCAGGTTCTAGTTGGGCGTGCATTTTTTATGGATGGGGAAATCTTGTTTG
                      ____________________________________________________________
consensus             CATGTGGTTCGCAGGTTCTAGTTGGGCGTGCATTTTTTATGGATGGGGAAATCTTGTTTG
 
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JMSF033E15+           CTTGTATAGTTTAAAAGTCATTAGCAAGGAATTTTTCTTGTCTGCTACAGTTGCGTTTGT
rJMFF023F01+          CTTGTATAGTTTAAAAGTCATTAGCAAGGAATTTTTCTTGTCTGCTACAGTTGCGTTTGT
                      ____________________________________________________________
consensus             CTTGTATAGTTTAAAAGTCATTAGCAAGGAATTTTTCTTGTCTGCTACAGTTGCGTTTGT
 
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JMSF033E15+           AGCATGGATAGTTATGGCCTTCTGGAAAGATATGCAAGTATATGGTTACAGGTCACCCTT
rJMFF023F01+          AGCATGGATAGTTATGGCCTTCTGGAAAGATATGCAAGTATATGGTTACAGGTCACCCTT
                      ____________________________________________________________
consensus             AGCATGGATAGTTATGGCCTTCTGGAAAGATATGCAAGTATATGGTTACAGGTCACCCTT
 
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JMSF033E15+           GACATCCTTGAAGAATTTGGTTTCTGGTTCAAAATAGCGACCCTTTGAAGAATTTGGTTT
rJMFF023F01+          GACATCCTTGAAGAATTTGGTTTCTGGTTCAAAATAGCGACCCTTTGAAGAATTTGGTTT
                      ____________________________________________________________
consensus             GACATCCTTGAAGAATTTGGTTTCTGGTTCAAAATAGCGACCCTTTGAAGAATTTGGTTT
 
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JMSF033E15+           CTAGTTCAAAATAACTGGTGCGACAGCTTCTTCCAGGCCGCTGTGGCTCCAAGAACAGAA
rJMFF023F01+          CTAGTTCAAAATAACTGGTGCGACAGCTTCTTCCAGGCCGCTGTGGCTCCAAGAACAGAA
                      ____________________________________________________________
consensus             CTAGTTCAAAATAACTGGTGCGACAGCTTCTTCCAGGCCGCTGTGGCTCCAAGAACAGAA
 
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JMSF033E15+           TGCCAGTATGATATTGCTTCAGTTTTGGCAGTTTATT                       
rJMFF023F01+          TGCCAGTATGATATTGCTTCAGTTTTGGCAGTTTATTCTCGAGGAAATAGTCAGTTTTGC
                      ____________________________________________________________
consensus             TGCCAGTATGATATTGCTTCAGTTTTGGCAGTTTATTCTCGAGGAAATAGTCAGTTTTGC
 
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rJMFF023F01+          GAGAACCTATTTTAGCATTGGCCCAAAGTTTCATTTCGCTTTGCTATGTACAGTACATAT
                      ____________________________________________________________
consensus             GAGAACCTATTTTAGCATTGGCCCAAAGTTTCATTTCGCTTTGCTATGTACAGTACATAT