Contig 004019:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF006D06-                                                     GTATACTGATCTACACTT
                      ____________________________________________________________
consensus                                                       GTATACTGATCTACACTT
 
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JMFF006D06-           CTTCTGTTCCTCTCACTAGTGTTCCGAAGCTTCAGAGCTCTTCTCCGGTGTTCTGCGTCC
                      ____________________________________________________________
consensus             CTTCTGTTCCTCTCACTAGTGTTCCGAAGCTTCAGAGCTCTTCTCCGGTGTTCTGCGTCC
 
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JMFF006D06-           TTCGACCTCTGGTCTCCGATTCAAGCATGGGCAAGGGGCCTGGTCTTTACACCGACATCG
JMFF018A17-                                     ATGGGCAAGGGGCCTGGTCTTTACGCCGACATCG
                      ____________________________________________________________
consensus             TTCGACCTCTGGTCTCCGATTCAAGCATGGGCAAGGGGCCTGGTCTTTACGCCGACATCG
 
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JMFF006D06-           GCAAGAAAGCTCGAGATCTTCTGTACAAGGATTACCAGACCGACCACAAGTTCACGATCA
JMFF018A17-           GCAAGAAAGCTCGAGATCTTCTGTACAAGGATTACCAGACCGACCACAAGTTCACGATCA
                      ____________________________________________________________
consensus             GCAAGAAAGCTCGAGATCTTCTGTACAAGGATTACCAGACCGACCACAAGTTCACGATCA
 
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JMFF006D06-           CTACGTACTCTCCCACTGGAGTTGCTATTACCTCATCGGGAATAAAGAAAGGAGATCTGT
JMFF018A17-           CTACGTACTCTCCCACTGGAGTTGCTATTACCTCATCGGGAATAAAGAAAGGAGATCTGT
                      ____________________________________________________________
consensus             CTACGTACTCTCCCACTGGAGTTGCTATTACCTCATCGGGAATAAAGAAAGGAGATCTGT
 
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JMFF006D06-           TTCAAGGTGATGTTAACATTCAGTTGAAGAACAAGAATATCACCACAGATATTAAAGTGG
JMFF018A17-           TTCAAGGTGATGTTAACATTCAGTTGAAGAACAAGAATATCACCACAGATATTAAAGTGG
                      ____________________________________________________________
consensus             TTCAAGGTGATGTTAACATTCAGTTGAAGAACAAGAATATCACCACAGATATTAAAGTGG
 
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JMFF006D06-           ACACAAACTCGAATCTTTTCACAACTATCACTGCTGATGAACCTGCTCCTGGTTTGAAGA
JMFF018A17-           ACACAAACTCGAATCTTTTCACAACTATCACTGCTGATGAACCTGCTCCTGGTTTGAAGA
                      ____________________________________________________________
consensus             ACACAAACTCGAATCTTTTCACAACTATCACTGCTGATGAACCTGCTCCTGGTTTGAAGA
 
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JMFF006D06-           CAATATTTAGCTTCAGAGTTCCTGATCAAAGATCAGAAAAGTTTGAACTTCAATATTTAC
JMFF018A17-           CAATATTTAGCTTCAGAGTTCCTGATCAAAGATCAGAAAAGTTTGAACTTCAATATTTAC
                      ____________________________________________________________
consensus             CAATATTTAGCTTCAGAGTTCCTGATCAAAGATCAGAAAAGTTTGAACTTCAATATTTAC
 
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JMFF006D06-           ATGACTATGCTGGAATAAGCGCTGGTGTTGCTTTGACAGCCAGCCCTGTTATCAACTTCT
JMFF018A17-           ATGACTATGCTGGAATAAGCGCTGGTGTTGCTTTGACAGCCAGCCCTGTTATCAACTTCT
                      ____________________________________________________________
consensus             ATGACTATGCTGGAATAAGCGCTGGTGTTGCTTTGACAGCCAGCCCTGTTATCAACTTCT
 
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JMFF006D06-           CTAGTGTAGTGGGAAGTAATGCACTTGCACTTGGAACTGATGTGTCTTTTGACACAA   
JMFF018A17-           CTAGTGTAGTGGGAAGTAATGCACTTGCACTTGGAACTGATGTGTCTTTTGACACAAAAT
rJMFF018A17+                                                       CTTTTGACACAAAAT
rJMFF022M05+                    GGGAAGTAATGCACTTGCACTNGGAACTGATGTGTCTTTTGACACAAAAT
                      ____________________________________________________________
consensus             CTAGTGTAGTGGGAAGTAATGCACTTGCACTTGGAACTGATGTGTCTTTTGACACAAAAT
 
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JMFF018A17-           CAGGAGCCTTTACCAAATATAATGCTGCTGTAAGCTTCACAAATTCCGACCTCATTGCTG
rJMFF018A17+          CAGGAGCCTTTACCAAATATAATGCTGCTGTAAGCTTCACAAATTCCGACCTCATTGCTG
rJMFF022M05+          CAGGAGCCTTTACCAAATATAATGCTGCTGTAAGCTTCACAAATTCCGACCTCATTGCTG
                      ____________________________________________________________
consensus             CAGGAGCCTTTACCAAATATAATGCTGCTGTAAGCTTCACAAATTCCGACCTCATTGCTG
 
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JMFF018A17-           CATTGATCTTGAAT                                              
rJMFF018A17+          CATTGATCTTGAATAATAAGGGTGACACTCTAAGTGCCTCGTACTACCACAATGTGAAGC
rJMFF022M05+          CATTGATCTTGAATAATAAGGGTGACACTCTAAGTGCCTCGTACTACCACAATGTGAAGC
                      ____________________________________________________________
consensus             CATTGATCTTGAATAATAAGGGTGACACTCTAAGTGCCTCGTACTACCACAATGTGAAGC
 
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rJMFF018A17+          CATTGACAAATACTTCCATTGGTGCTGAGGTGACCCATAGTTTCTCAACCAATGAGAATA
rJMFF022M05+          CATTGACAAATACTTCCATTGGTGCTGAGGTGACCCATAGTTTCTCAACCAATGAGAATA
                      ____________________________________________________________
consensus             CATTGACAAATACTTCCATTGGTGCTGAGGTGACCCATAGTTTCTCAACCAATGAGAATA
 
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rJMFF018A17+          CCCTCACTATTGGTACCCAGCATCAGTTGGATCCATTGACGACAGTGAAGGCAAGGGTTA
rJMFF022M05+          CCCTCACTATTGGTACCCAGCATCAGTTGGATCCATTGACGACAGTGAAGGCAAGGGTTA
                      ____________________________________________________________
consensus             CCCTCACTATTGGTACCCAGCATCAGTTGGATCCATTGACGACAGTGAAGGCAAGGGTTA
 
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rJMFF018A17+          ACAACTTTGGAAAGGCAAGTGCTCTTGTTCAGCATGAGTGGCGCCCCAAGTCCCTTTTCA
rJMFF022M05+          ACAACTTTGGAAAGGCAAGTGCTCTTGTTCAGCATGAGTGGCGCCCCAAGTCCCTTTTCA
                      ____________________________________________________________
consensus             ACAACTTTGGAAAGGCAAGTGCTCTTGTTCAGCATGAGTGGCGCCCCAAGTCCCTTTTCA
 
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rJMFF018A17+          CTGTATCCGGAGAAGTGGACACAAAGTCTGTTGACAAGAGGGCAAAGTTTGGTTTGGCCT
rJMFF022M05+          CTGTATCCGGAGAAGTGGACACAAAGTCTGTTGACAAGAGGGCAAAGTTTGGTTTGGCCT
                      ____________________________________________________________
consensus             CTGTATCCGGAGAAGTGGACACAAAGTCTGTTGACAAGAGGGCAAAGTTTGGTTTGGCCT
 
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rJMFF018A17+          TGGCTCTCAAGCCATAATTGTGTTTTGGAGTAGTTAGGTTGAGGAACGTTATACAGTCAC
rJMFF022M05+          TGGCTCTCAAGCCATAATTGTGTTTTGGAGTAGTTAGGTTGAGGAACGTTATACAGTCAC
                      ____________________________________________________________
consensus             TGGCTCTCAAGCCATAATTGTGTTTTGGAGTAGTTAGGTTGAGGAACGTTATACAGTCAC
 
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rJMFF018A17+          ATGAACGTGCTCAAAGAACAATGTCCTCTTCGGCTGTTAATTTGGCGGAGTAAGATTTCA
rJMFF022M05+          ATGAACGTGCTCAAAGAACAATGTCCTCTTCGGCTGTTAATTTGGCGGAGTAAGATTTCA
                      ____________________________________________________________
consensus             ATGAACGTGCTCAAAGAACAATGTCCTCTTCGGCTGTTAATTTGGCGGAGTAAGATTTCA
 
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rJMFF018A17+          AAAAATAATTCTTGGTGATTTGTTGAGAACCTATGCCTCAATTATTCAGTTACATGTTCT
rJMFF022M05+          AAAAATAATTCTTGGTGATTTGTTGAGAACCTATGCCTCAATTATTCAGTTACATGTTCT
                      ____________________________________________________________
consensus             AAAAATAATTCTTGGTGATTTGTTGAGAACCTATGCCTCAATTATTCAGTTACATGTTCT
 
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rJMFF018A17+          GACATTCTTAGTTGACCCACTTTTGAACTTTTTGATGGGTCTATGTTCATCCTGAGAGGT
rJMFF022M05+          GACATTCTTAGTTGACCCACTTTTGAACTTTTTGATGGGTCTATGTTCATCCTGAGAGGT
                      ____________________________________________________________
consensus             GACATTCTTAGTTGACCCACTTTTGAACTTTTTGATGGGTCTATGTTCATCCTGAGAGGT
 
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rJMFF018A17+          TATTGTGATTGGGGCCTTGTGCTCTTACCTCTCTAATGGGTGGATGTCTTGGGAAATCTA
rJMFF022M05+          TATTGTGATTGGGGCCTTGTGCTCTTACCTCTCTAATGGGTGGATGTCTTGGGAAATCTA
                      ____________________________________________________________
consensus             TATTGTGATTGGGGCCTTGTGCTCTTACCTCTCTAATGGGTGGATGTCTTGGGAAATCTA
 
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rJMFF018A17+          TAGATTTGTATAAAAAAAATGTTCACCCTTGAAGAGGGTGTCGTACTTTTGAAAATTTTA
rJMFF022M05+          TAGATTTGTATAAAAAAAATGTTCACCCTTGAAGAGGGTGTCGTACTTTTGAAAATTTTA
                      ____________________________________________________________
consensus             TAGATTTGTATAAAAAAAATGTTCACCCTTGAAGAGGGTGTCGTACTTTTGAAAATTTTA