Contig 004011:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021F06Sequence538011539 (2)emb|CDP05900.1|4e-80unnamed protein product [Coffea canephora]674004011 (2)ref|XP_007133428.1|6e-60hypothetical protein PHAVU_011G1777000g, partial [Phaseolus vulgaris] gb|ESW0542
JMSF031M01Sequence626011539 (2)ref|XP_009616873.1|2e-101PREDICTED: nucleolar GTP-binding protein 2 [Nicotiana tomentosiformis]675004011 (2)ref|XP_007133428.1|6e-67hypothetical protein PHAVU_011G1777000g, partial [Phaseolus vulgaris] gb|ESW0542

Alignment

This contig is upended


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rJMSF031M01+                                  TTGACTGCCCAGGTGTTGTTTACCACAGTAATGATT
rJMFF021F06+                                                        CCACAGTAATGATT
                      ____________________________________________________________
consensus                                     TTGACTGCCCAGGTGTTGTTTACCACAGTAATGATT
 
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rJMSF031M01+          CTGAAACAGATATTGTCTTGAAGGGTGTGGTACGTGTGACAAACTTGCATGATGCTTCTG
rJMFF021F06+          CTGAAACAGATATTGTCTTGAAGGGTGTGGTACGTGTGACAAACTTGCATGATGCTTCTG
                      ____________________________________________________________
consensus             CTGAAACAGATATTGTCTTGAAGGGTGTGGTACGTGTGACAAACTTGCATGATGCTTCTG
 
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rJMSF031M01+          AGCACATAGGTGAAGTGCTAACCCGTGTGAAAAAGGAGCATATTGAAAGAGCATATAAGA
rJMFF021F06+          AGCACATAGGTGAAGTGCTAACCCGTGTGAAAAAGGAGCATATTGAAAGAGCATATAAGA
                      ____________________________________________________________
consensus             AGCACATAGGTGAAGTGCTAACCCGTGTGAAAAAGGAGCATATTGAAAGAGCATATAAGA
 
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rJMSF031M01+          TAAAGGAATGGGAGGATGAAAATGACTTTCTTCTTCAGCTATGCCGGGGAACAGGCAAAC
rJMFF021F06+          TAAAGGAATGGGAGGATGAAAATGACTTTCTTCTTCAGCTATGCCGGGGAACAGGCAAAC
                      ____________________________________________________________
consensus             TAAAGGAATGGGAGGATGAAAATGACTTTCTTCTTCAGCTATGCCGGGGAACAGGCAAAC
 
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rJMSF031M01+          TGTTGAAGGGAGGGGAACCCGACGTTAAGACTGCTGCAAAGATGGTTCTCCATGACTGGC
rJMFF021F06+          TGTTGAAGGGAGGGGAACCCGACGTTAAGACTGCTGCAAAGATGGTTCTCCATGACTGGC
                      ____________________________________________________________
consensus             TGTTGAAGGGAGGGGAACCCGACGTTAAGACTGCTGCAAAGATGGTTCTCCATGACTGGC
 
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rJMSF031M01+          AGAGAGGCCGGATACCGTTCTTCGTGCCACCCCCGAAGATAGATGACGATGCAAAAGAGG
rJMFF021F06+          AGAGAGGCCGGATACCGTTCTTCGTGCCACCCCCGAAGATAGATGACGATGCAAAAGAGG
                      ____________________________________________________________
consensus             AGAGAGGCCGGATACCGTTCTTCGTGCCACCCCCGAAGATAGATGACGATGCAAAAGAGG
 
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rJMSF031M01+          ACAATGAGCTTGGTGGAGAGGAAGAGGATGCCGCGGCAGCTAGAAGAGCCATTGCAGATG
rJMFF021F06+          ACAATGAGCTTGGTGGAGAGGAAGAGGATGCCGCGGCAGCTAGAAGAGCCATTGCAGATG
                      ____________________________________________________________
consensus             ACAATGAGCTTGGTGGAGAGGAAGAGGATGCCGCGGCAGCTAGAAGAGCCATTGCAGATG
 
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rJMSF031M01+          TAATATCATCACAGCAGCTAAGTGATGTTCCTGTTCAGACAGATCTGTACAGTGAGAGTG
rJMFF021F06+          TAATATCATCACAGCAGCTAAGTGATGTTCCTGTTCAGACAGATCTGTACAGTGAGAGTG
                      ____________________________________________________________
consensus             TAATATCATCACAGCAGCTAAGTGATGTTCCTGTTCAGACAGATCTGTACAGTGAGAGTG
 
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rJMSF031M01+          AGTTGCTGGGTGAGACTAGCGAAAAGCTTCCTGAGAATGAGCCCTAGGCTCCTCTACTGC
rJMFF021F06+          AGTTCCTGGGTGAGACTAGCGAAAAGCTTCCTGAGAATGAGCCCTAGGCTCCTCTACTGC
                      ____________________________________________________________
consensus             AGTTGCTGGGTGAGACTAGCGAAAAGCTTCCTGAGAATGAGCCCTAGGCTCCTCTACTGC
 
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rJMSF031M01+          CCTGCCAGCCATTGTAGTGCTGCTGCTACTGGCCATTATTTTTGTCATTTGCTAATTTGA
rJMFF021F06+          CCTGCCAGCCATTGTAGTGCTGCTGCTACTGGCCATTATTTTTGTCATTTGCTAATTTGA
                      ____________________________________________________________
consensus             CCTGCCAGCCATTGTAGTGCTGCTGCTACTGGCCATTATTTTTGTCATTTGCTAATTTGA
 
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rJMSF031M01+          TTTGACAACCCAACCTAAAATTATGGTTGTTATGCTTCCTTATTTTATCTGTCCTATTTA
rJMFF021F06+          TTTGACAACCCAACCTAAAATTATGGTTGTTATGCTTCCTTATTTTATCTGTCCTATTTA
                      ____________________________________________________________
consensus             TTTGACAACCCAACCTAAAATTATGGTTGTTATGCTTCCTTATTTTATCTGTCCTATTTA
 
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rJMSF031M01+          CTATATACGGTGTATTAGTCAATTACACTTTTTATTTGT                     
rJMFF021F06+          CTATATACGGTGTATTAGTCAATTACACTTTTTATTTGTTTGGTTTTTATTTTCTTTTAA
                      ____________________________________________________________
consensus             CTATATACGGTGTATTAGTCAATTACACTTTTTATTTGTTTGGTTTTTATTTTCTTTTAA