Contig 004009:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF045N16+                                                  TACGACAGAATCATAGTCCC
rJMFF021D17+                                                   ACGACAGAATCATAGTCCC
                      ____________________________________________________________
consensus                                                     TACGACAGAATCATAGTCCC
 
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rJMSF045N16+          CGTAACGAGAAAGTTCACGGGACACAAGAACGGCCTGACACAACTCCAGAGAATGGGCAT
rJMFF021D17+          CGTAACGAGAAAGTTCACGGGACACAAGAACGGCCTGACACAACTCCAGAGAATGGGCAT
                      ____________________________________________________________
consensus             CGTAACGAGAAAGTTCACGGGACACAAGAACGGCCTGACACAACTCCAGAGAATGGGCAT
 
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rJMSF045N16+          CGGCCTCTTCATATCCATCTTCGCCATGTTATCTGCCGGGATTCTGGAGCTCGTGAGACT
rJMFF021D17+          CGGCCTCTTCATATCCATCTTCGCCATGTTATCTGCCGGGATTCTGGAGCTCGTGAGACT
                      ____________________________________________________________
consensus             CGGCCTCTTCATATCCATCTTCGCCATGTTATCTGCCGGGATTCTGGAGCTCGTGAGACT
 
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rJMSF045N16+          CAGATTCGTGCAGAGGCACAATTACTACGACCTGGAGGAGGTCCCGATGTCGATATTCTG
rJMFF021D17+          CAGATTCGTGCAGAGGCACAATTACTACGACCTGGAGGAGGTCCCGATGTCGATATTCTG
                      ____________________________________________________________
consensus             CAGATTCGTGCAGAGGCACAATTACTACGACCTGGAGGAGGTCCCGATGTCGATATTCTG
 
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rJMSF045N16+          GCAGGTCCCTCAGTACTTCCTTATAGGCTGCGCGGAAGTTTTCACCTTTATCGGCCAGTT
rJMFF021D17+          GCAGGTCCCTCAGTACTTCCTTATAGGCTGCGCGGAAGTTTTCACCTTTATCGGCCAGTT
                      ____________________________________________________________
consensus             GCAGGTCCCTCAGTACTTCCTTATAGGCTGCGCGGAAGTTTTCACCTTTATCGGCCAGTT
 
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rJMSF045N16+          GGAGTTTTTCTACGAGCAGGCACCCGACGCCATGAGAAGTCTCTGCTCAGCTCTCTCGCT
rJMFF021D17+          GGAGTTTTTCTACGAGCAGGCACCCGACGCCATGAGAAGTCTCTGCTCAGCTCTCTCGCT
                      ____________________________________________________________
consensus             GGAGTTTTTCTACGAGCAGGCACCCGACGCCATGAGAAGTCTCTGCTCAGCTCTCTCGCT
 
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rJMSF045N16+          CACCACTGTCGCGTTAGGGAACTACTTGAGTTCTTTGCTGGTGACTATCGTTACGAGCAT
rJMFF021D17+          CACCACTGTCGCGTTAGGGAACTACTTGAGTTCTTTGCTGGTGACTATCGTTACGAGCAT
                      ____________________________________________________________
consensus             CACCACTGTCGCGTTAGGGAACTACTTGAGTTCTTTGCTGGTGACTATCGTTACGAGCAT
 
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rJMSF045N16+          TACAGCAAAGAATGGGAAGGCGGGGTGGATTCCAGATAATCTCAACCACGGACACATAGA
rJMFF021D17+          TACAGCAAAGAATGGGAAGGCGGGGTGGATTCCAGATAATCTGAACCACGGACACATAGA
                      ____________________________________________________________
consensus             TACAGCAAAGAATGGGAAGGCGGGGTGGATTCCAGATAATCTGAACCACGGACACATAGA
 
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rJMSF045N16+          TTACTTCTACTATCTCTTGGCAATTCTCAGTGTGCTCAACTTGGGAGTTTATCTCTGGAT
rJMFF021D17+          TTACTTCTACTATCTCTTGGCAATTCTCAGTGTGCTCAACTTGGGAGTTTATCTCTGGAT
                      ____________________________________________________________
consensus             TTACTTCTACTATCTCTTGGCAATTCTCAGTGTGCTCAACTTGGGAGTTTATCTCTGGAT
 
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rJMSF045N16+          TGCCCAGTGGTATACTTACAAAAAACCAGTCGGCCCTCTTCGCTGAACGTTTATTTTGCC
rJMFF021D17+          TGCCCAGTGGTATACTTACAAAAAACCAGTCGGCCCTCTTCGCTGAACGTTTATTTTGCC
                      ____________________________________________________________
consensus             TGCCCAGTGGTATACTTACAAAAAACCAGTCGGCCCTCTTCGCTGAACGTTTATTTTGCC
 
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rJMSF045N16+          CATAGGTTTTCAAGTTGTGTGTTTAAATGGTTCAAGAAACCAACAATATATACTGTTTGG
rJMFF021D17+          CATAGGTTTTCAAGTTGTGTGTTTAAATGGTTCAAGAAACCAACAATATATACTGTTTGG
                      ____________________________________________________________
consensus             CATAGGTTTTCAAGTTGTGTGTTTAAATGGTTCAAGAAACCAACAATATATACTGTTTGG
 
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rJMSF045N16+          CTGTGTATCAGTAGGTGTAATTGTGTAAGCAACAAGAATGATTGTACTGTTAAAACTAAA
rJMFF021D17+          CTGTGTATCAGTAGGTGTAATTGTGTAAGCAACAAGAATGATTGTACTGTTAAAACTAAA
                      ____________________________________________________________
consensus             CTGTGTATCAGTAGGTGTAATTGTGTAAGCAACAAGAATGATTGTACTGTTAAAACTAAA
 
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rJMSF045N16+          GATCAGATT                                                   
rJMFF021D17+          GATCAGATTGGAAGTCAAAGACAGGGCATTTGATAATAACAACATAATTAATACAAACAC
                      ____________________________________________________________
consensus             GATCAGATTGGAAGTCAAAGACAGGGCATTTGATAATAACAACATAATTAATACAAACAC