Contig 003998:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019F02Sequence562023708gb|EYU23502.1|3e-11hypothetical protein MIMGU_mgv1a005564mg [Erythranthe guttata]755003998 (2)ref|XP_006348129.1|3e-92PREDICTED: ataxin-10-like [Solanum tuberosum]
JMFN009O15Sequence629003998 (2)ref|XP_006366476.1|1e-81PREDICTED: ataxin-10-like isoform X1 [Solanum tuberosum] ref|XP_006366477.1| PRE

Alignment

This contig is upended


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rJMFF019F02-                                   ATTTGAGGTCTTTGACTAATTGTTAAGGGTGAGCA
                      ____________________________________________________________
consensus                                      ATTTGAGGTCTTTGACTAATTGTTAAGGGTGAGCA
 
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JMFN009O15+                              GATTAATAACCGAAANANAGTTACCCCTCGCGTAACCGACC
rJMFF019F02-          TCGATTTCGGTCGGTTTTTGATTAATAACCGAAAAAAAGTTACCCCTCGCGTAACCGACC
                      ____________________________________________________________
consensus             TCGATTTCGGTCGGTTTTTGATTAATAACCGAAAAAAAGTTACCCCTCGCGTAACCGACC
 
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JMFN009O15+           GAAATAAGTAACCACACCCCCTAGGTTACTCAGAGTGGGGTATGTTAACAAGCTTTGCAC
rJMFF019F02-          GAAATAAGTAACCACACCCCCTAGGTTACTCAGAGTGGGGTATGTTAACAAGCTTTGCAC
                      ____________________________________________________________
consensus             GAAATAAGTAACCACACCCCCTAGGTTACTCAGAGTGGGGTATGTTAACAAGCTTTGCAC
 
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JMFN009O15+           GATGAGTTGTAGGGTCTACATCTACTCGGAGACCAAGCCTAGCAAGTTCAGGAACATCTA
rJMFF019F02-          GATGAGTTGTAGGGTCTACATCTACTCGGAGACCAAGCCTAGCAAGTTCAGGAACATCTA
                      ____________________________________________________________
consensus             GATGAGTTGTAGGGTCTACATCTACTCGGAGACCAAGCCTAGCAAGTTCAGGAACATCTA
 
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JMFN009O15+           CACTTCTTTGAAGCTCCAAATCTGTTACTACTTTTTGGTTTTCTGTATTTCCTTCCAGTA
rJMFF019F02-          CACTTCTTTGAAGCTCCAAATCTGTTACTACTTTTTGGTTTTCTGTATTTCCTTCCAGTA
                      ____________________________________________________________
consensus             CACTTCTTTGAAGCTCCAAATCTGTTACTACTTTTTGGTTTTCTGTATTTCCTTCCAGTA
 
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JMFN009O15+           GATTCCTTGCAGCCCAGATGCCCCATTCCCTCAGGAACGGATTATCTTCATCACTAACAC
rJMFF019F02-          GATTCCTTGCAGCCCAGATGCCCCATTCCCTCAGGAACGGATTATCTTCATCACTAACAC
                      ____________________________________________________________
consensus             GATTCCTTGCAGCCCAGATGCCCCATTCCCTCAGGAACGGATTATCTTCATCACTAACAC
 
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JMFN009O15+           ACTGTTGTAGTAACAAAATAATACCATTTCTCTTTCTGATTTCATCCTGCACCAGCTTTC
rJMFF019F02-          ACTGTTGTAGTAACAAAATAATACCATTTCTCTTTCTGATTTCATCCTGCACCAGCTTTC
                      ____________________________________________________________
consensus             ACTGTTGTAGTAACAAAATAATACCATTTCTCTTTCTGATTTCATCCTGCACCAGCTTTC
 
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JMFN009O15+           TCCGGTATGCACAGTTTCCGATCACAGCGACAATGTCTCTCCGGAAGCCTTTGTAAGGGC
rJMFF019F02-          TCCGGTATGCACAGTTTCCGATCACAGCGACAATGTCTCTCCGGAAGCCTTTGTAAGGGC
                      ____________________________________________________________
consensus             TCCGGTATGCACAGTTTCCGATCACAGCGACAATGTCTCTCCGGAAGCCTTTGTAAGGGC
 
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JMFN009O15+           AACGTGCAGTTGGAGAAGAAGACGTGATCTCCCCTCGGTCCATTGCTTTCTGAATTGTTG
rJMFF019F02-          AACGTGCAGTTGGAGAAGAAGACGTGATCTCCCCTCGGTCCATTGCTTTCTGAATTGTTG
                      ____________________________________________________________
consensus             AACGTGCAGTTGGAGAAGAAGACGTGATCTCCCCTCGGTCCATTGCTTTCTGAATTGTTG
 
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JMFN009O15+           CTGGAGGTTCAAGGTTGGAGAGGAAAGCGAGCAGCAATTCAATTAGTCCTGATGAAACTA
rJMFF019F02-          CTGGAGGTTCAAGGTTGGAGAGGAAAGCGAGCAGCAATTCAATTAGTCCTGATGAAACTA
                      ____________________________________________________________
consensus             CTGGAGGTTCAAGGTTGGAGAGGAAAGCGAGCAGCAATTCAATTAGTCCTGATGAAACTA
 
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JMFN009O15+           GCATGCCCACGGCATCATCTGAAGCTCCAGTGAGATGATCACAGGCACAAATGTCTCTCA
rJMFF019F02-          GCATGCCCACGGCATCATCTGAAGCTCCAGTGAGATGATCACAGGCACAAATGTCTCTCA
                      ____________________________________________________________
consensus             GCATGCCCACGGCATCATCTGAAGCTCCAGTGAGATGATCACAGGCACAAATGTCTCTCA
 
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JMFN009O15+           AAATGGTTAATGAGTACCCTAGAACATCAATAACAGCATTGCCAGTTG            
rJMFF019F02-          AAATGGTTAATGAGTACCCTAGAACATCAATAACAGCATTGCCAGTTGGTAGACCAGTTT
                      ____________________________________________________________
consensus             AAATGGTTAATGAGTACCCTAGAACATCAATAACAGCATTGCCAGTTGGTAGACCAGTTT
 
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rJMFF019F02-          CCCCTCTAGTGGAGAAATCAACAACCCCGCTAGAACTTCTCAGTATCCCAAGAATGCACG
                      ____________________________________________________________
consensus             CCCCTCTAGTGGAGAAATCAACAACCCCGCTAGAACTTCTCAGTATCCCAAGAATGCACG