Contig 003997:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005B22Sequence491000881 (14)gb|KDO54954.1|4e-93hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]760003997 (8)gb|AAF26735.1|2e-126methionine synthase [Coffea arabica]
JMFF019D20Sequence594000881 (14)gb|KDO54954.1|1e-114hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]730003997 (8)gb|AAF26735.1|7e-124methionine synthase [Coffea arabica]
JMFF021F13Sequence390006079 (2)tpg|DAA47597.1|3e-43TPA: putative methionine synthase family protein [Zea mays]445003997 (8)tpg|DAA50625.1|3e-65TPA: putative methionine synthase family protein [Zea mays]
JMFF032I11Sequence532000881 (14)gb|KDO54954.1|4e-102hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]735003997 (8)gb|AAF26735.1|2e-137methionine synthase [Coffea arabica]
JMFF045H06Sequence669006079 (2)gb|KDO54954.1|4e-97hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]282003997 (8)gb|ABR25991.1|1e-04methyltetrahydropteroyltriglutamate#homocysteine methyltransferase [Oryza sativ
JMSF008C13Sequence359000881 (14)gb|KDO54954.1|5e-58hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]738003997 (8)gb|AAF26735.1|4e-128methionine synthase [Coffea arabica]
JMSF033F13Sequence636000881 (14)gb|KDO54954.1|1e-123hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]741003997 (8)gb|AAF26735.1|2e-127methionine synthase [Coffea arabica]
JMSF037G01Sequence697000881 (14)gb|KDO54954.1|3e-137hypothetical protein CISIN_1g0202292mg, partial [Citrus sinensis]603003997 (8)gb|AAF26735.1|1e-92methionine synthase [Coffea arabica]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF005B22+ CCAGATTGCTTTGGC
rJMFF032I11+ GTTAGAAATGACCAACCAAGATTTGAAACCTGCTACCAGATTGCTTTGGC
rJMSF008C13+ CCAGANTGCTTTGGC
rJMSF033F13+ TGCTACCAGATTGCTTNGGC
rJMFF019D20+ TTGCTTTGGC
                      ____________________________________________________________
consensus GTTAGAAATGACCAACCAAGATTTGAAACCTGCTACCAGATTGCTTTGGC
 
. : . : . : . : . : . :
rJMFF005B22+ AATTAAGGATGAAGTAGAGGATTTGGAGAAGGCAAACATCAATGTCATTCAAATTGATGA
rJMFF032I11+ AATTAAGGATGAAGTAGAGGATTTGGAGAAGGCAAACATCAATGTCATTCAAATTGATGA
rJMSF008C13+ AATTAAGGATGAAGTAGAGGATTTGGAGAAGGCAAACATCAATGTCATTCAAATTGATGA
rJMSF033F13+ AATTAAGGATGAAGTAGAGGATTTGGAGAAGGCAAACATCAATGTCATTCAAATTGATGA
rJMFF019D20+ AATTAAGGATGAAGTAGAGGATTTGGAGAAGGCAAACATCAATGTCATTCAAATTGATGA
                      ____________________________________________________________
consensus AATTAAGGATGAAGTAGAGGATTTGGAGAAGGCAAACATCAATGTCATTCAAATTGATGA
 
. : . : . : . : . : . :
rJMFF005B22+ AGCTGCTTTGAGAGAGGGTTTGCCTCTTAGGAAGGCGGAACATGCTTTCTATTTGAACTG
rJMFF032I11+ AGCTGCTTTGAGAGAGGGTTTGCCTCTTAGGAAGGCGGAACATGCTTTCTATTTGAACTG
rJMSF008C13+ AGCTGCTTTGAGAGAGGGTTTGCCTCTTAGGAAGGCGGAACATGCTTTCTATTTGAACTG
rJMSF033F13+ AGCTGCTTTGAGAGAGGGTTTGCCTCTTAGGAAGGCGGAACATGCTTTCTATTTGAACTG
rJMSF037G01+ AACTG
rJMFF019D20+ AGCTGCTTTGAGAGAGGGTTTGCNTCTTAGGAAGGCGGAACATGCTTTCTATTTGAACTG
                      ____________________________________________________________
consensus AGCTGCTTTGAGAGAGGGTTTGCCTCTTAGGAAGGCGGAACATGCTTTCTATTTGAACTG
 
. : . : . : . : . : . :
rJMFF005B22+ GGCTGTCCACTCATTCAGAATCACCAACTGCGGTGTCCAAAACACAACCCAGATCCATAC
rJMFF032I11+ GGCTGTCCACTCATTCAGAATCACCAACTGCGGTGTCCAAAACACAACCCAGATCCATAC
rJMSF008C13+ GGCTGTCCACTCATTCAGAATCACCAACTGCGGTGTCCAAAACACAACCCAGATCCATAC
rJMSF033F13+ GGCTGTCCACTCATTCAGAATCACCAACTGCGGTGTCCAAAACACAACCCAGATCCATAC
rJMSF037G01+ GGCTGTCCACTCATTCAGAATCACCAACTGCGGTGTNCAAAACACAANCCAGATCCATAC
rJMFF019D20+ GGCTGTCCACTCATTCAGAATCACCAACTGCGGTGTCCAAAACACAACCCAGATCCATAC
                      ____________________________________________________________
consensus GGCTGTCCACTCATTCAGAATCACCAACTGCGGTGTCCAAAACACAACCCAGATCCATAC
 
. : . : . : . : . : . :
rJMFF005B22+ TCACATGTGCTATTCAAACTTCAACGACATCATCCACTCCATCATTGACATGGATGCTGA
rJMFF032I11+ TCACATGTGCTATTCAAACTTCAACGACATCATCCACTCCATCATTGACATGGATGCTGA
rJMSF008C13+ TCACATGTGCTATTCAAACTTCAACGACATCATCCACTCCATCATTGACATGGATGCTGA
rJMSF033F13+ TCACATGTGCTATTCAAACTTCAACAACATCATCCACTCCATCATTGACATGGATGCTGA
rJMSF037G01+ TCACATGTGCTATTCAAACTTCAANGACATCATCCACTCCATCATTGACATGGATGCTGA
rJMFF021F13+ ACTCCATCATTGACATGGATGCTGA
rJMFF019D20+ TCACATGTGCTATTCAAACTTCAACGACATCATCCACTCCATCATTGACATGGATGCTGA
                      ____________________________________________________________
consensus TCACATGTGCTATTCAAACTTCAACGACATCATCCACTCCATCATTGACATGGATGCTGA
 
. : . : . : . : . : . :
rJMFF005B22+ TGTTATCACAATTGAGAACTCCCGTTCTGATGAGAAGCTCCTCTCAGTTTTCCGTGAAGG
rJMFF032I11+ TGTTATCACAATTGAGAACTCCCGTTCTGATGAGAAGCTCCTCTCAGTTTTCCGTGAAGG
rJMSF008C13+ TGTTATCACAATTGAGAACTCCCGTTCTGATGAGAAGCTCCTCTCAGTTTTCCGTGAAGG
rJMSF033F13+ TGTTATCACAATTGAGAACTCCCGTTCTGATGAGAAGCTCCTCTCAGTTTTCCGTGAAGG
rJMSF037G01+ TGTTATCACAATTGAGAACTCCCGTTCTGATGAGAAGCTCCTCTCAGTTTTCCGTGAAGG
rJMFF021F13+ NGTTATCNCAATTGAGANCTCCCGTTCTGATGAGAAGCTCCTCTCAGTTTTCCGTGAAGG
rJMFF019D20+ TGTTATCACAATTGAGAACTCCCGTTCTGATGAGAAGCTCCTCTCAGTTTTCCGTGAAGG
                      ____________________________________________________________
consensus TGTTATCACAATTGAGAACTCCCGTTCTGATGAGAAGCTCCTCTCAGTTTTCCGTGAAGG
 
. : . : . : . : . : . :
rJMFF005B22+ AGTGAAGTATGGTGCTGGAATCGGACCGGGTGTGTACGACATCCACTCCCCCAGAATACC
rJMFF032I11+ AGTGAAGTATGGTGCTGGAATCGGACCGGGTGTGTACGACATCCACTCCCCCAGAATACC
rJMSF008C13+ AGTGAAGTATGGTGCTGGAATCGGACCGGGTGTGTACGACATCCACTCCCCCAGAATACC
rJMSF033F13+ AGTGAAGTATGGTGCTGGAATCGGACCGGGTGTGTACGACATCCACTCCCCCAGAATACC
rJMSF037G01+ AGTGAAGTATGGTGCTGGAATCGGACCGGGTGTGTACGACATCCACTCCCCCAGAATACC
rJMFF021F13+ AGTGAAGTATGGTGCTGGAATCGGACCGGGTGTGTACGACATCCACTCCCCCAGAATACC
rJMFF019D20+ AGTGAAGTATGGTGCTGGAATCGGACCGGGTGTGTACGACATCCACTCCCCCAGAATACC
                      ____________________________________________________________
consensus AGTGAAGTATGGTGCTGGAATCGGACCGGGTGTGTACGACATCCACTCCCCCAGAATACC
 
. : . : . : . : . : . :
rJMFF005B22+ GTCCACCGAAGAGATTGCAGACAGAGTTAACAAGATGCTTGCAGTCCTTGACACAAACAT
rJMFF032I11+ GTCCACCGAAGAGATTGCAGACAGAGTTAACAAGATGCTTGCAGTCCTTGACACAAACAT
rJMSF008C13+ GTCCACCGAAGAGATTGCAGACAGAGTTAACAAGATGCTTGCAGTCCTTGACACAAACAT
rJMSF033F13+ GTCCACCGAAGAGATTGCAGACAGAGTTAACAAGATGCTTGCAGTCCTTGACACAAACAT
rJMSF037G01+ GTCCACNGAAGAGATTGCAGACAGAGTTAACAAGATGCTTGCAGTCCTTGATACAAACAT
rJMFF021F13+ GTCCACCGAAGAGATTGCAGACAGAGTTAACAAGATGCTTGCAGTCCTTGACACAAACAT
rJMFF019D20+ GTCCACCGAAGAGATTGCAGACAGAGTTAACAAGATGCTTGCAGTCCTTGACACAAACAT
                      ____________________________________________________________
consensus GTCCACCGAAGAGATTGCAGACAGAGTTAACAAGATGCTTGCAGTCCTTGACACAAACAT
 
. : . : . : . : . : . :
rJMFF005B22+ CTTGTGGGTCAACCCTGACTGTGGTCTCAAGACTCGCAAGTACACAGAAGTGAAGCCAGC
rJMFF032I11+ CTTGTGGGTCAACCCTGACTGTGGTCTCAAGACTCGCAAGTACACAGAAGTGAAGCCAGC
rJMSF008C13+ CTTGTGGGTCAACCCTGACTGTGGTCTCAAGACTCGCAAGTACACAGAAGTGAAGCCAGC
rJMSF033F13+ CTTGTGGGTCAACCCTGACTGTGGTCTCAAGACTCGCAAGTACACAGAAGTGAAGCCAGC
rJMSF037G01+ CTTGTGGGTCAACCCTGACTGTGGTCTCAAGACTCGCAAGTACACAGAAGTGAAGCCAGC
rJMFF021F13+ CTTGTGGGTCAACCCTGACTGTGGTCTCAAGACTCGCAAGTACACAGAAGTGAAGCCAGC
rJMFF045H06+ ACACAGAAGTGAAGCCAGC
rJMFF019D20+ CTTGTGGGTCAACCCTGACTGTGGTCTCAAGACTCGCAAGTACACAGAAGTGAAGCCAGC
                      ____________________________________________________________
consensus CTTGTGGGTCAACCCTGACTGTGGTCTCAAGACTCGCAAGTACACAGAAGTGAAGCCAGC
 
. : . : . : . : . : . :
rJMFF005B22+ TCTTGAGAACATGGTTTCTGCTGCCAAG
rJMFF032I11+ TCTTGAGAACATGGTTTCTGCTGCCAAGCTCATCCGGACCCAGCTTGCCAGTGCCAAATG
rJMSF008C13+ TCTTGAGAACATGGTTTCTGCTGCCAAGCTCATCCGGACCCAGCTTGCCAGTGCCAAATG
rJMSF033F13+ TCTTGAGAACATGGTTTCTGCTGCCAAGCTCATCCGGACCCAGCTTGCCAGTGCCAAATG
rJMSF037G01+ TCTTGAGAACATGGTTTCTGCTGCCAAGCTCATCCGGACCCAGCTTGCCAGTGCCAAATG
rJMFF021F13+ TCTTGAGAACATGGTTTCTGCTGCCAAGCTCATCCGGACCCAGCTTGCCAGTGCCAAATG
rJMFF045H06+ TCTTGAGAACATGGTTTTTGCTGCCAAGCTCATCCGGACCCAGCTTGCCAGTGCCAAATG
rJMFF019D20+ TCTTGAGAACATGGTTTCTGCTGCCAAGCTCATCCGGACCCAGCTTGCCAGTGCCAAATG
                      ____________________________________________________________
consensus TCTTGAGAACATGGTTTCTGCTGCCAAGCTCATCCGGACCCAGCTTGCCAGTGCCAAATG
 
. : . : . : . : . : . :
rJMFF032I11+ AGCCTTTGAATTTCACCACCCAATTTATTCCTAAATACCAGTGTTTGTGAGGAAATGGCA
rJMSF008C13+ AGCCTTTGAATTTCACCACCCAATTTATTCCTAAATACCAGTGTTTGTGAGGAAATGGCA
rJMSF033F13+ AGCCTTTGAATTTCACCACCCAATTTATTCCTAAATACCAGTGTTTGTGAGGAAATGGCA
rJMSF037G01+ AGCCTTTGAATTTCACCACCCAATTTATTCCTAAATACCAGTGTTTGTGAGGAAATGGCA
rJMFF021F13+ AGCCTTTGAATTTCACCACCCAATTTATTCCTAAATACCAGTGTTTGTGAGGAAATGGCA
rJMFF045H06+ AGCCTTTGAATTTCACCACCCAATTTATTCCTAAATACCAGTGTTTGTGAGGAAATGGCA
rJMFF019D20+ AGCCTTTGAATTTCACCACCCAATTTATTCCTAAATACCAGTGTTTGTGAGGAAATGGCA
                      ____________________________________________________________
consensus AGCCTTTGAATTTCACCACCCAATTTATTCCTAAATACCAGTGTTTGTGAGGAAATGGCA
 
. : . : . : . : . : . :
rJMFF032I11+ CTCTGTAGCTCTAGTGTGCTCCCTGAGCATTTATTATTCTTTTCCACTTTTCTTTGTTTC
rJMSF008C13+ CTCTGTAGCTCTAGTGTGCTCCCTGAGCATTTATTATTCTTTTCCACTTTTCTTTGTTTC
rJMSF033F13+ CTCTGTAGCTCTAGTGTGCTCCCTGAGCATTTATTATTCTTTTCCACTTTTCTTTGTTTC
rJMSF037G01+ CTCTGTAGCTCTAGTGTGCTCCCTGAGCATTTANTATTCTTTTCCACTANTCTTTGTTTC
rJMFF021F13+ CTCTGTAGCTCTAGTGTGCTCCCTGAGCATTTATTATTCTTTTCCACTTTTCTTTGTTTC
rJMFF045H06+ CTCTGTAGCTTTAGTGTGCTCCCTGAGCATTTATTATTCTTTTCCACTTTTCTTTGTTTC
rJMFF019D20+ CTCTGTAGCTCTAGTGTGCTCCCTGAGCATTTATTATTCTTTTCCACTTTTCTTTGTTTC
                      ____________________________________________________________
consensus CTCTGTAGCTCTAGTGTGCTCCCTGAGCATTTATTATTCTTTTCCACTTTTCTTTGTTTC
 
. : . : . : . : . : . :
rJMFF032I11+ GTCTTTTACTTTTACCTTTGCATTT
rJMSF008C13+ GTCTTTTACTTTTACCTTTGCATTTTGAAAGGAATCTGATATCCTGAACTTCTCAGAG
rJMSF033F13+ GTCTTTTACTTTTACCTTTGCATTTTGAAAGGAATCTGATATCCTGAACTTCTCAGAG
rJMSF037G01+ GTCTTTTACTTTCACCTTTGCATTTTGAAAGGAATCTGATATCCTGAACTTCTCAGAG
rJMFF045H06+ GTCTTTTACTTTTACCTTTGCATTTTGAAAGGAATTTGATATCCTG
rJMFF019D20+ GTCTTTTACTTTTACCTTTGCATTTTGAAAGGAATCTGATATCCTGAACTTCTCAGAGNG
                      ____________________________________________________________
consensus GTCTTTTACTTTTACCTTTGCATTTTGAAAGGAATCTGATATCCTGAACTTCTCAGAGNG