Contig 003996:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018K17Sequence558004600 (2)ref|XP_009772780.1|6e-66PREDICTED: mitochondrial substrate carrier family protein E [Nicotiana sylvestr750003996 (2)ref|XP_009772780.1|7e-48PREDICTED: mitochondrial substrate carrier family protein E [Nicotiana sylvestr
JMFF036F13Sequence560004600 (2)ref|XP_009772780.1|1e-66PREDICTED: mitochondrial substrate carrier family protein E [Nicotiana sylvestr729003996 (2)emb|CBI15123.3|5e-42unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMFF036F13+                                                             GGAAGACAG
rJMFF018K17+                                        TTCAAAAATATGACAGAATATGGAAGACAG
                      ____________________________________________________________
consensus                                           TTCAAAAATATGACAGAATATGGAAGACAG
 
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rJMFF036F13+          AAATGGTTTCCCAACTCAAATTNGCAATTAAATAGCTCTCTTGAAGGGCTCTTGTTGGGA
rJMFF018K17+          AAATGGTTTCCCAACTCAAATTTGCAATTAAATAGCTCTCTTGAAGGGCTCTTGTTGGGA
                      ____________________________________________________________
consensus             AAATGGTTTCCCAACTCAAATTTGCAATTAAATAGCTCTCTTGAAGGGCTCTTGTTGGGA
 
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rJMFF036F13+          GGACTGGCTGGGGGTTTGACTGCATATCTCACCACACCCTTGGATGTTATTAAAACAAGA
rJMFF018K17+          GGACTGGCTGGGGGTTTGACTGCATATCTCACCACACCCTTGGATGTTATTAAAACAAGA
                      ____________________________________________________________
consensus             GGACTGGCTGGGGGTTTGACTGCATATCTCACCACACCCTTGGATGTTATTAAAACAAGA
 
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rJMFF036F13+          TTACAAGTGCAGGGGAAAATAGTGAGGTATAGTGGTTGGTCAGACGCGGTTCACAAGATA
rJMFF018K17+          TTACAAGTGCAGGGGAAAATAGTGAGGTATAGTGGTTGGTCAGACGCGGTTCACAAGATA
                      ____________________________________________________________
consensus             TTACAAGTGCAGGGGAAAATAGTGAGGTATAGTGGTTGGTCAGACGCGGTTCACAAGATA
 
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rJMFF036F13+          TGGGCAACTGAAGGTTTAAGAGGGATGTTCAGAGGCAGCATTCCCAGAATTGCATGGTAC
rJMFF018K17+          TGGGCAACTGAAGGTTTAAGAGGGATGTTCAGAGGCAGCATTCCCAGAATTGCATGGTAC
                      ____________________________________________________________
consensus             TGGGCAACTGAAGGTTTAAGAGGGATGTTCAGAGGCAGCATTCCCAGAATTGCATGGTAC
 
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rJMFF036F13+          TTCCCAGCATCTGCTCTCACCTTCATGGCCGTAGAGTTTCTGAGAGAACAGTTCAACGAA
rJMFF018K17+          TTCCCAGCATCTGCTCTCACCTTCATGGCCGTAGAGTTTCTGAGAGAACAGTTCAACGAA
                      ____________________________________________________________
consensus             TTCCCAGCATCTGCTCTCACCTTCATGGCCGTAGAGTTTCTGAGAGAACAGTTCAACGAA
 
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rJMFF036F13+          AGACTGGACAACAATAAACTCCCAGAAATCAAAAGTGTATCAATAGACAAAAAAGATTCG
rJMFF018K17+          AGACTGGACAACAATAAACTCCCAGAAATCAAAAGTGTATCAATAGACAAAAAAGATTCA
                      ____________________________________________________________
consensus             AGACTGGACAACAATAAACTCCCAGAAATCAAAAGTGTATCAATAGACAAAAAAGATTCG
 
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rJMFF036F13+          ACATTTCAAGAGGTATCATAGAACAGAACATCCCATTCTACACTGAAGACTTCACCACCA
rJMFF018K17+          ACATTTCAAGAGGTATCATAGAACAGAACATCCCATTCTACACTGAAGACTTCACCACCA
                      ____________________________________________________________
consensus             ACATTTCAAGAGGTATCATAGAACAGAACATCCCATTCTACACTGAAGACTTCACCACCA
 
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rJMFF036F13+          TATGTTACTTCCCGTGAGATTCTCGTTAATTCGATGCTGAGGAATGCCCCAAGATTGTAT
rJMFF018K17+          TATGTTACTTCCCGTGAGATTCTCGTTAATTCGATGCTGAGGAATGCCCCAAGATTGTAT
                      ____________________________________________________________
consensus             TATGTTACTTCCCGTGAGATTCTCGTTAATTCGATGCTGAGGAATGCCCCAAGATTGTAT
 
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rJMFF036F13+          GATTTTGAGTAAATATACAAATATAATCTTACGTACTCCCTAATGTTTGTTTATTCGTGG
rJMFF018K17+          GATTTTGAGTAAATATACAAATATAATCTTACGTACTCCCTAATGTTTGTTTATTCGTGG
                      ____________________________________________________________
consensus             GATTTTGAGTAAATATACAAATATAATCTTACGTACTCCCTAATGTTTGTTTATTCGTGG
 
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rJMFF036F13+          ATTATGCATCCTCACATGGCACGTGGGGTGCTCTGGTAGAATATTCAACATACTTGGAAT
rJMFF018K17+          ATTATGCATCCTCACATGGCACGTGGGGTGCTCTGGTAGAATATTCAACATACTTGGAAT
                      ____________________________________________________________
consensus             ATTATGCATCCTCACATGGCACGTGGGGTGCTCTGGTAGAATATTCAACATACTTGGAAT
 
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rJMFF036F13+          GGGAATATTCCATGTCGGGAATGTTGTCGGATAGTTTTTTTTTATGACTTTAATTGCACC
rJMFF018K17+          GGGAATATTCCATGTCGGGAATGTTGTCGGATAGTTTTTTTTTATGACTTTAATTGCACC
                      ____________________________________________________________
consensus             GGGAATATTCCATGTCGGGAATGTTGTCGGATAGTTTTTTTTTATGACTTTAATTGCACC
 
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rJMFF036F13+          GTAAATTTGGAAATTAGAGCTAAGATTTGGGGAGGAGAAAATAAATGAGAAGGAAGGAAG
rJMFF018K17+          GTAAATTTGGAAATTAGAGCTAAGATTTGGGGAGGAGAAAATAAATGAGAAGGAAGGAAG
                      ____________________________________________________________
consensus             GTAAATTTGGAAATTAGAGCTAAGATTTGGGGAGGAGAAAATAAATGAGAAGGAAGGAAG