| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012F02 | Sequence | 458 | 004501 (7) | 728 | 003994 (6) | emb|CDP05922.1| | 1e-91 | unnamed protein product [Coffea canephora] | |||
| JMFF018B15 | Sequence | 367 | 004501 (7) | 729 | 003994 (6) | emb|CDP05922.1| | 2e-51 | unnamed protein product [Coffea canephora] | |||
| JMFF018G08 | Sequence | 419 | 004501 (7) | 700 | 003994 (6) | ref|XP_009604687.1| | 3e-44 | PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana toment | |||
| JMFF032P20 | Sequence | 427 | 004501 (7) | 687 | 003994 (6) | ref|XP_009604687.1| | 2e-41 | PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana toment | |||
| JMFF040O08 | Sequence | 455 | 004501 (7) | 687 | 003994 (6) | emb|CDP05922.1| | 1e-95 | unnamed protein product [Coffea canephora] | |||
| JMSF018F07 | Sequence | 281 | 004501 (7) | ref|XP_002285008.1| | 4e-16 | PREDICTED: probable serine/threonine-protein kinase At1g54610 [Vitis vinifera] | 776 | 003994 (6) | emb|CDP05922.1| | 1e-72 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF012F02+ CTTCGATGCAGAAAAGA
____________________________________________________________
consensus CTTCGATGCAGAAAAGA
. : . : . : . : . : . :
rJMFF040O08+ TAAAAGCAGAAGTGAGATGTTCAACTCTCAACAGGAAGAAGTG
rJMFF012F02+ CAAAGTCAGTCGAATTCTAAAAGCAGAAGTGAGATGTTCAACTCTCAACAGGAAGAAGTG
____________________________________________________________
consensus CAAAGTCAGTCGAATTCTAAAAGCAGAAGTGAGATGTTCAACTCTCAACAGGAAGAAGTG
. : . : . : . : . : . :
rJMFF040O08+ GCTTCGGGTTTTCCTATTGACCCGCCTAGGCCATCTCAGGCCCTTGGAGAAGCGAGCAAT
rJMFF012F02+ GCTTCGGGTTTTCCTATTGACCCGCNTAGGCCATCTCAGGCCCTTGGAGAAGCGAGCAAT
rJMSF018F07+ GAGAAGCGAGCAAT
____________________________________________________________
consensus GCTTCGGGTTTTCCTATTGACCCGCCTAGGCCATCTCAGGCCCTTGGAGAAGCGAGCAAT
. : . : . : . : . : . :
rJMFF040O08+ GATCCCCAAGGACAGCTGCATAAGAGAGCTTCGCATTCAGGACCGCTGGCTCACAGGGCT
rJMFF012F02+ GATCCCCAAGGACAGCTGCATAAGAGAGCTTCGCATTCAGGACCGCTGGCTCACAGGGCT
rJMSF018F07+ GATCCCCAAGGACAGCTGCATAAGAGAGCTTCGCATTCAGGACCGCTGGCTCACAGGGCT
____________________________________________________________
consensus GATCCCCAAGGACAGCTGCATAAGAGAGCTTCGCATTCAGGACCGCTGGCTCACAGGGCT
. : . : . : . : . : . :
rJMFF040O08+ GCCTGGGCAAAATCCGGGAAGTGCACAGAAGACG-CCCCAAAGATTTCAACCGGGGAAGA
rJMFF012F02+ GCCTGGGCAAAATCCGGGAAGTGCACAGAAGACG-CCCCAAAGATTTCAACCGGGGAAGA
rJMSF018F07+ GCCTGGGCAAAATCCGGGAAGTGCACAGAAGACG-CCCCAAAGATTTCAACCGGGGAAGA
rJMFF018B15+ GCAAAATCCGGGAAGTGCACAGAAGACGCCCCCAAAGATTTCAACCGGGGAAGA
____________________________________________________________
consensus GCCTGGGCAAAATCCGGGAAGTGCACAGAAGACG-CCCCAAAGATTTCAACCGGGGAAGA
. : . : . : . : . : . :
rJMFF040O08+ CTTGTCAGCGTTGTCTGGTCTGGTTGCTGCTAGGAGGAGCTTGTTATATGAAAATCTAGC
rJMFF012F02+ CTTGTCAGCGTTGTCTGGTCTGGTTGCTGCTAGGAGGAGCTTGTTATATGAAAATCTAGC
rJMSF018F07+ CTTGTCAGCGTTGTCTGGTCTGGTTGCTGCTAAGAGGAGCTTGTTATATGAAAATCTAGC
rJMFF018B15+ CTTGTCAGCGTTGTCTGGTCTGGTTGCTGCTAGGAGGAGCTTGTTATATGAAAATCTAGC
rJMFF032P20+ GAGGAGCTTGTTATATGAAAATCTAGC
rJMFF018G08+ TGGTTGCTGCTAGGAGGAGCTTGTTATATGAAAATCTAGC
____________________________________________________________
consensus CTTGTCAGCGTTGTCTGGTCTGGTTGCTGCTAGGAGGAGCTTGTTATATGAAAATCTAGC
. : . : . : . : . : . :
rJMFF040O08+ GGAGCAGTCTGGCCCTACTAATCGTGAACCTCCAAAACTTATATCAAGATTTCCTGGATC
rJMFF012F02+ GGAGCAGTCTGGCCCTACTAATCGTGAACCTCCAAAACTTATATCAAGATTTCCTGGATC
rJMSF018F07+ GGAGCAGTCTGGCCCTACTAATCGTGAACCTCCAAAACTTATATCAAGATTTCCTGGATC
rJMFF018B15+ GGAGCAGTCTGGCCCTACTAATCGTGAACCTCCAAAACTTATATCAAGATTTCCTGGATC
rJMFF032P20+ GGAGCAGTCTGGCCCTACTAATCGTGAACCTCCAAAACTTATATCAAGATTTCCTGGATC
rJMFF018G08+ GGAGCAGTCTGGCCCTACTAATCGTGAACCTCCAAAACTTATATCAAGATTTCCTGGATC
____________________________________________________________
consensus GGAGCAGTCTGGCCCTACTAATCGTGAACCTCCAAAACTTATATCAAGATTTCCTGGATC
. : . : . : . : . : . :
rJMFF040O08+ CTTCAAAGAGGCTTCGGATACAACTATGAAGCAAAACCAAAAAAGTCAAGTGCACCAAAA
rJMFF012F02+ CTTCAAAGAGGCTTCGGATACAACTATGAAGCAAAACCAAAAAAGTCAAGTGCACCAAAA
rJMSF018F07+ CTTCAAAGAGGCTTCGGATACAACTATGAAGCAAAACCAAAAAAGTCAAGTGCACCAAAA
rJMFF018B15+ CTTCAAAGAGGCTTCGGATACAACTATGAAGCAAAACCAAAAAAGTCAAGTGCACCAAAA
rJMFF032P20+ CTTCAAAGAGGCTTCGGATACAACTATGAAGCAAAACCAAAAAAGTCAAGTGCACCAAAA
rJMFF018G08+ CTTCAAAGAGGCTTCGGATACAACTATGAAGCAAAACCAAAAAAGTCAAGTGCACCAAAA
____________________________________________________________
consensus CTTCAAAGAGGCTTCGGATACAACTATGAAGCAAAACCAAAAAAGTCAAGTGCACCAAAA
. : . : . : . : . : . :
rJMFF040O08+ TGATGAAGGAAGAAGTAGCAGCAATGATCCTGTGATTCTGGGCTATGGATCAAAGGGCAA
rJMFF012F02+ TGATGAAGGAAGAAGTAGCAGCAATGATCCTGTGATTCTGGGCTATGGATCAAAGGGCAA
rJMSF018F07+ TGATGAAGGAAGAAGTAGCAGCAATGATCCTGTGATTCTGGGCTATGGATCAAAGGGCAA
rJMFF018B15+ TGATGAAGGAAGAAGTAGCAGCAATGATCCTGTGATTCTGGGCTATGGATCAAAGGGCAA
rJMFF032P20+ TGATGAAGGAAGAAGTAGCAGCAATGATCCTGTGATTCTGGGCTATGGATCAAAGGGCAA
rJMFF018G08+ TGATGAAGGAAGAAGTAGCAGCAATGATCCTGTGATTCTGGGCTATGGATCAAAGGGCAA
____________________________________________________________
consensus TGATGAAGGAAGAAGTAGCAGCAATGATCCTGTGATTCTGGGCTATGGATCAAAGGGCAA
. : . : . : . : . : . :
rJMFF040O08+ CAAGATTCACTACTCTGGACCGCTGCTCGTTCCATCAGCCCGAGTAGATCAGATCCTCAA
rJMFF012F02+ CAAGATTCACTACTCTGGACCGCTGCTCGTTCCATCAGCCCGAGTAGATCAGATCCTCAA
rJMSF018F07+ CAAGATTCACTACTCTGGACCGCTGCTCGTTCCATCAGCCCGAGTAGATCAGATCCTCAA
rJMFF018B15+ CAAGATTCACTACTCTGGACCGCTGCTCGTTCCATCAGCCCGAGTAGATCAGATCCTCAA
rJMFF032P20+ CAAGATTCACTACTCTGGACCGCTGCTCGTTCCATCAGCCCGAGTAGATCAGATCCTCAA
rJMFF018G08+ CAAGATTCACTACTCTGGACCGCTGCTCGTTCCATCAGCCCGAGTAGATCAGATCCTCAA
____________________________________________________________
consensus CAAGATTCACTACTCTGGACCGCTGCTCGTTCCATCAGCCCGAGTAGATCAGATCCTCAA
. : . : . : . : . : . :
rJMFF040O08+ AGACCATGACCGCCATATCCAAGAAGCTGCAAGACGGGCACGGTTGGACAAGGCAAAAGC
rJMFF012F02+ AGACCATGACCGCCATATCCAAGAAGCTGCAAGACGGGCACGGTTGGACAAGGCAAAAGC
rJMSF018F07+ AGACCNTGACCGCCATATCCAAGAAGCTGCAAGACGGGCACGGTTGGACAAGGCAAAAGC
rJMFF018B15+ AGACCATGACCGCCATATCCAAGAAGCTGCAAGACGGGCACGGTTGGACAAGGCAAAAGC
rJMFF032P20+ AGACCATGACCGCCATATCCAAGAAGCTGCAAGACGGGCACGGTTGGACAAGGCAAAAGC
rJMFF018G08+ AGACCATGACCGCCATATCCAAGAAGCTGCAAGACGGGCACGGTTGGACAAGGCAAAAGC
____________________________________________________________
consensus AGACCATGACCGCCATATCCAAGAAGCTGCAAGACGGGCACGGTTGGACAAGGCAAAAGC
. : . : . : . : . : . :
rJMFF040O08+ AAGAAATGCTCAGGTTGAAAAAAACCAAATATCAACAGGTTCATTAGTTGTTTCTGGACG
rJMFF012F02+ AAGAAATGCTCAGGTTGAAAAAAACCAAATATCAACAGGTTCATTAGTTGTTTCTGGACG
rJMSF018F07+ AAGAAATGCTCAGGTTGAAAAAAACCAAATATCAACAGGTTCATTAGTTGTTTCTGGACG
rJMFF018B15+ AAGAAATGCTCAGGTTGAAAAAAACCAAATATCAACAGGTTCATTAGTTGTTTCTGGACG
rJMFF032P20+ AAGAAATGCTCAGGTTGAAAAAAACCAAATATCAACAGGTTCATTAGTTGTTTCTGGACG
rJMFF018G08+ AAGAAATGCTCAGGTTGAAAAAAACCAAATATCAACAGGTTCATTAGTTGTTTCTGGACG
____________________________________________________________
consensus AAGAAATGCTCAGGTTGAAAAAAACCAAATATCAACAGGTTCATTAGTTGTTTCTGGACG
. : . : . : . : . : . :
rJMFF040O08+ CTGAATTCATGTTAAGAAGACTTAGCAGAGGTGACCGTAGGAATA
rJMFF012F02+ CTGAATTCATGTTAAGAAGACTTAGCAGAGGTGACCGTAGGAATATGTAGCT
rJMSF018F07+ CTGAATTCATGTTAAGAAGACTTAGCAGAGGTGACCGTAGGAATATGTAGCTGAATTTCT
rJMFF018B15+ CTGAATTCATGTTAAGAAGACTTAGCAGAGGTGACCGTAGGAATATGTAGCTGAATTTCT
rJMFF032P20+ CTGAATTCATGTTAAGAAGACTTAGCAGAGGTGACCGTAGGAATATGTAGCTGAATTTCT
rJMFF018G08+ CTGAATTCATGTTAAGAAGACTTAGCAGAGGTGACCGTAGGAATATGTAGCTGGATTTCT
____________________________________________________________
consensus CTGAATTCATGTTAAGAAGACTTAGCAGAGGTGACCGTAGGAATATGTAGCTGAATTTCT
. : . : . : . : . : . :
rJMSF018F07+ TGTTCCTATATGAAAAAGAAAATAAACAAGGAAAGAAGAGGGTGGATGGGTATATATAGA
rJMFF018B15+ TGTTCCTATATGAAAAAGAAAATAAACAAGGAAAGAAGAGGGTGGATGGGTATATATAGG
rJMFF032P20+ TGTTCCTATATGAAAAAGAAAATAAACAAGGAAAGAAGAGGGTGGATGGGTATATATAGG
rJMFF018G08+ TGTTCCTATATGAAAAAGAAAATAAACAAGGAAAGAAGAGGGTGGATGGGTATATATAGG
____________________________________________________________
consensus TGTTCCTATATGAAAAAGAAAATAAACAAGGAAAGAAGAGGGTGGATGGGTATATATAGG
. : . : . : . : . : . :
rJMSF018F07+ CACTTNGGCTCTTCCACGAANTGATGCATGGAAGCAATTTGTTGGACAAACCTAGAGAGA
rJMFF018B15+ CACTTTGGCTCTTCCACGAAATGATGCATGGAAGCAATTTGTTGGACAAACCTAGAGAGA
rJMFF032P20+ CACTTTGGCTCTTCCACGAAATGATGCATGGAAGCAATTTGTTGGACAAACCTAGAGAGA
rJMFF018G08+ CACTTTGGCTCTTCCACGAAATGATGCATGGAAGCAATTTGTTGGACAAACCTAGAGAGA
____________________________________________________________
consensus CACTTTGGCTCTTCCACGAAATGATGCATGGAAGCAATTTGTTGGACAAACCTAGAGAGA
. : . : . : . : . : . :
rJMSF018F07+ GTTCATTAGGAAATCTCTTCTCTTTCTGCCATGTGAGCTT
rJMFF018B15+ GTTCATTAGGAAATCTCTTCTCTTTCTGCCATGTGAGCTTTTAGCTTGCAAGCATTGCAA
rJMFF032P20+ GTTCATTAGGAAATCTCTTCTCTTTCTGCCATGTGAGCTTTTAGCTTGCAAGCATTGCAA
rJMFF018G08+ GTTCATTAGGAAATCTCTTCTCTTTCTGCCATGTGAGCTTTTAGCTTGCAAGCATTGCAA
____________________________________________________________
consensus GTTCATTAGGAAATCTCTTCTCTTTCTGCCATGTGAGCTTTTAGCTTGCAAGCATTGCAA
. : . : . : . : . : . :
rJMFF018B15+ TTGTTATATATTGCC
rJMFF032P20+ TTGTTATATATTGCCCAATATGTATAGATCTTGTTTTCCTTCAAATGGTATGCAGGAATA
rJMFF018G08+ TTGTTATATATTGCCCAATATGTATAGATCTTGTTTTCCTTCAAATGGTATGCAGGAATA
____________________________________________________________
consensus TTGTTATATATTGCCCAATATGTATAGATCTTGTTTTCCTTCAAATGGTATGCAGGAATA