Contig 003989:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017J02Sequence477011963 (6)ref|XP_009598371.1|1e-58PREDICTED: uncharacterized protein LOC104094196 isoform X1 [Nicotiana tomentosi184003989 (2)
JMFF036N13Sequence516011963 (6)ref|XP_009598371.1|9e-61PREDICTED: uncharacterized protein LOC104094196 isoform X1 [Nicotiana tomentosi132003989 (2)

Alignment

This contig is upended


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rJMFF017J02+                                                                  GTTT
                      ____________________________________________________________
consensus                                                                     GTTT
 
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rJMFF036N13+                                                               GGGGTTT
rJMFF017J02+          TGGGNCAAAAAGNGGGGCNAACAAAAAAACNNGCAAAAGNGANAANNTTNACNGGGGTTT
                      ____________________________________________________________
consensus             TGGGNCAAAAAGNGGGGCNAACAAAAAAACNNGCAAAAGNGANAANNTTNACNGGGGTTT
 
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rJMFF036N13+          TTAATTTTTTTTTTTTGTTTTTCTTATCTTGAGAATAATCATAGATGTGATGCTTTTAGG
rJMFF017J02+          TTANTTTTTTTTTTTTGTTTTTCTTATCTTGAGAATAATCATAGATGTGATGCTTTTAGG
                      ____________________________________________________________
consensus             TTAATTTTTTTTTTTTGTTTTTCTTATCTTGAGAATAATCATAGATGTGATGCTTTTAGG
 
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rJMFF036N13+          ATTCCACACAGAAATTGCTGCTCAATGAATTTGTGAATGAAGCTGTAATGGGGGAAATTA
rJMFF017J02+          ATTCCACACAGAAATTGCTGCTCAATGAATTTGTGAATGAAGCTGTAATGGGGGAAATTA
                      ____________________________________________________________
consensus             ATTCCACACAGAAATTGCTGCTCAATGAATTTGTGAATGAAGCTGTAATGGGGGAAATTA