Contig 003986:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF018M21-                                 AAATCAGATCTCGCTCTCAGACCTCTCCAACACTCTCT
                      ____________________________________________________________
consensus                                   AAATCAGATCTCGCTCTCAGACCTCTCCAACACTCTCT
 
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JMFF018M21-           GCCGTCGCTCCTCACTGACCGCACCTCAGCCGTCGATACCGCCTCTCTCACCACGCTCCC
JMFF015M22-                           GACCGCACCTCAGCCGTCGATACCGCCTCTCTCACCACGCTCCC
                      ____________________________________________________________
consensus             GCCGTCGCTCCTCACTGACCGCACCTCAGCCGTCGATACCGCCTCTCTCACCACGCTCCC
 
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JMFF018M21-           TCAGCCCCGATCAAATACCACCGCCGACACCAAGCTAAGGACTCAAGCGCCACTCTCATC
JMFF015M22-           TCAGCCCCGATCAAATACCACCGCCGACACCAAGCTAAGGACTCAAGCGCCACTCTCATC
                      ____________________________________________________________
consensus             TCAGCCCCGATCAAATACCACCGCCGACACCAAGCTAAGGACTCAAGCGCCACTCTCATC
 
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JMFF018M21-           AACCACCCATGACGCTTCTCTTCTTCTCGTTAGTTACCGGTGACCAGACCCAGCCGAAAA
JMFF015M22-           AACCACCCATGACGCTTCTCTTCTTCTCGTTAGTTACCGGTGACCAGACCCAGCCGAAAA
                      ____________________________________________________________
consensus             AACCACCCATGACGCTTCTCTTCTTCTCGTTAGTTACCGGTGACCAGACCCAGCCGAAAA
 
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JMFF018M21-           CGACGCCTCCACGTACTGTCGACGACGCCTGCCACTGACGTCGCCACCACCACTGTGGTT
JMFF015M22-           CGACGCCTCCACGTACTGTCGACGACGCCTGCCACTGACGTCGCCACCACCACTGTGGTT
                      ____________________________________________________________
consensus             CGACGCCTCCACGTACTGTCGACGACGCCTGCCACTGACGTCGCCACCACCACTGTGGTT
 
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JMFF018M21-           CTCAGCCGCCGCCGGTTCCGCTGAAGGCACTACCTATGAGTTGCTGATGACTAGTGCTAT
JMFF015M22-           CTCAGCCGCCGCCGGTTCCGCTGAAGGCACTACCTATGAGTTGCTGATGACTAGTGCTAT
                      ____________________________________________________________
consensus             CTCAGCCGCCGCCGGTTCCGCTGAAGGCACTACCTATGAGTTGCTGATGACTAGTGCTAT
 
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JMFF018M21-           CATATGTGACTAGAGGAGAATCAGAGACTGGCGGTGGAATGCTCGTTGTTGCAGTGCAAG
JMFF015M22-           CATATGTGACTAGAGGAGAATCAGAGACTGGCGGTGGAATGCTCGTTGTTGCAGTGCAAG
rJMFF018M21+                                                            GCAGTGCAAG
                      ____________________________________________________________
consensus             CATATGTGACTAGAGGAGAATCAGAGACTGGCGGTGGAATGCTCGTTGTTGCAGTGCAAG
 
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JMFF018M21-           AGATGGGAGAGAGAGTGCTCGTTGTACGACAGGGACCGAGAGGCATTGATGGTTCGACAA
JMFF015M22-           AGATGGGAGAGAGAGTGCTCGTTGTACGACAGGGACCGAGAGGCATTGATGGTTCGACAA
rJMFF018M21+          AGATGGGAGAGAGAGTGCTCGTTGTACGACAGGGACCGAGAGGCATTGATGGTTCGACAA
rJMFF015M22+                                                AGAGGCATTGATGGTTCGACAA
                      ____________________________________________________________
consensus             AGATGGGAGAGAGAGTGCTCGTTGTACGACAGGGACCGAGAGGCATTGATGGTTCGACAA
 
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JMFF018M21-           GTACGATGCCCTGTAGCTGGTCTGGTCTTGTAAATGTAGTATTGTCACAGGAGGAGATAT
JMFF015M22-           GTACGATGCCCTGTAGCTGGTCTGGTCTTGTAAATGTAGTATTGTCACAGGAGGAGATAT
rJMFF018M21+          GTACGATGCCCTGTAGCTGGTCTGGTCTTGTAAATGTAGTATTGTCACAGGAGGAGATAT
rJMFF015M22+          GTACGATGCCCTGTAGCTGGTCTGGTCTNGTAAATGTAGTATTGTCACAGGAGGAGATAT
                      ____________________________________________________________
consensus             GTACGATGCCCTGTAGCTGGTCTGGTCTTGTAAATGTAGTATTGTCACAGGAGGAGATAT
 
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JMFF018M21-           ATCAGAAGTACCTGGATGATACCAAGGCAAGAAAAACACATTTTGCTTCTGCTGATTCTG
JMFF015M22-           ATCAGAAGTACCTGGATGATACCAAGGCAAGAAAAACACATTTTGCTTCTGCTGATTCTG
rJMFF018M21+          ATCAGAAGTACCTGGATGATACCAAGGCAAGAAAAACACATTTTGCTTCTGCTGATTCTG
rJMFF015M22+          ATCAGAAGTACCTGGATGATACCAAGGCAAGAAAAACACATTTTGCTTCTGCTGATTCTG
                      ____________________________________________________________
consensus             ATCAGAAGTACCTGGATGATACCAAGGCAAGAAAAACACATTTTGCTTCTGCTGATTCTG
 
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JMFF018M21-           CAACT                                                       
JMFF015M22-           CAACTAATG                                                   
rJMFF018M21+          CAACTAATGGTTCTTCTTGTTGTTGGTAATCATTGGATAGGTCAAACAATATAATGTAGA
rJMFF015M22+          CAACTAATGGTTCTTCTTGTTGTTGGTAATCATTGGATAGGTCAAACAATATAATGTAGA
                      ____________________________________________________________
consensus             CAACTAATGGTTCTTCTTGTTGTTGGTAATCATTGGATAGGTCAAACAATATAATGTAGA
 
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rJMFF018M21+          AATACTCCCTGCCTATGAGCTCATAGTATCATCACTCACTTGCTTTATGTACGACAGTTT
rJMFF015M22+          AATACTCCCTGCCTATGAGCTCATAGTATCATCACTCACTTGCTTTATGTACGACAGTTT
                      ____________________________________________________________
consensus             AATACTCCCTGCCTATGAGCTCATAGTATCATCACTCACTTGCTTTATGTACGACAGTTT
 
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rJMFF018M21+          CCCGTCCTCGCCAGTGCCAGGTACAATCTCGTCATCTTAGGAGACGAGTCTGTCGGCAAA
rJMFF015M22+          CCCGTCCTCGCCAGTGCCAGGTACAATCTCGTCATCTTAGGAGACGAGTCTGTCGGCAAA
                      ____________________________________________________________
consensus             CCCGTCCTCGCCAGTGCCAGGTACAATCTCGTCATCTTAGGAGACGAGTCTGTCGGCAAA
 
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rJMFF018M21+          AGCAGTATCATCACTCACTTTATGAACAACAAGTTCCGTAACAAATACGAGATCTTTTGA
rJMFF015M22+          AGCAGTATCATCACTCACTTTATGAACAACAAGTTCCGTAACAAATACGAGATCTTTTGA
                      ____________________________________________________________
consensus             AGCAGTATCATCACTCACTTTATGAACAACAAGTTCCGTAACAAATACGAGATCTTTTGA
 
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rJMFF018M21+          GGAATGTGAGGACTCAAGTATTGCTCAAACTGATCAAGCCTTACACAAGAATTCGGATCC
rJMFF015M22+          GGAATGTGAGGACTCAAGTATTGCTCAAACTGATCAAGCCTTACACAAGAATTCGGATCC
                      ____________________________________________________________
consensus             GGAATGTGAGGACTCAAGTATTGCTCAAACTGATCAAGCCTTACACAAGAATTCGGATCC
 
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rJMFF018M21+          CTTTCATATCCAAGGTCAAAGGGGATGAAGAAATACACTGACGTAGATAAGTGGAACACA
rJMFF015M22+          CTTTCATATCCAAGGTCAAAGGGGATGAAGAAATACACTGACGTAGATAAGTGGAACACA
                      ____________________________________________________________
consensus             CTTTCATATCCAAGGTCAAAGGGGATGAAGAAATACACTGACGTAGATAAGTGGAACACA
 
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rJMFF018M21+          CAGCTTAGGTCCCTCTATCAGACTGTTAGTAACCAAGTTTGTTAATTTTTGAGATTTTTT
rJMFF015M22+          CAGCTTAGGTCCCTCTATCAGACTGTTAGTAACCAAGTTTGTTAATTTTTGAGATTTTTT
                      ____________________________________________________________
consensus             CAGCTTAGGTCCCTCTATCAGACTGTTAGTAACCAAGTTTGTTAATTTTTGAGATTTTTT
 
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rJMFF018M21+          GAGAGTATATTCTATCTGAAAAGTCACTCCTAGTCCTGGAAAACAATAGATTACAAGCAT
rJMFF015M22+          GAGAGTATATTCTATCTGAAAAGTCACTCCTAGTCCTGGAAAACAATAGATTACAAGCAT
                      ____________________________________________________________
consensus             GAGAGTATATTCTATCTGAAAAGTCACTCCTAGTCCTGGAAAACAATAGATTACAAGCAT
 
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rJMFF018M21+          TACATTTACTTTTGCACCAAAGATGTTCATGGGTAGTGGAGAAGTGTCCATT        
rJMFF015M22+          TACATTTACTTTTGCACCAAAGATGTTCATGGGTAGTGGAGAAGTGTCCATTTACAGAGA
                      ____________________________________________________________
consensus             TACATTTACTTTTGCACCAAAGATGTTCATGGGTAGTGGAGAAGTGTCCATTTACAGAGA