Contig 003984:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002L13Sequence640003984 (3)
JMFF012N04Sequence587005927 (2)789003984 (3)ref|XP_011093757.1|1e-13PREDICTED: LOW QUALITY PROTEIN: cyclin-L1-1 [Sesamum indicum]
JMFF015G10Sequence583005927 (2)671003984 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF012N04+ CTGTATGCAAG
                      ____________________________________________________________
consensus CTGTATGCAAG
 
. : . : . : . : . : . :
rJMFF002L13+ TCAGCCAGTGCNG
rJMFF012N04+ GAAAGTGGTTCGTTTTCAACATCAAATAGATTATGGGATTCACCTTCTCAGCCAGTGCCG
                      ____________________________________________________________
consensus GAAAGTGGTTCGTTTTCAACATCAAATAGATTATGGGATTCACCTTCTCAGCCAGTGCCG
 
. : . : . : . : . : . :
rJMFF002L13+ ANGGAAGTGGCATCAAATGGCCCTTNTGTAAATGATGACNCTGGTACTCCAAAGGGGNCT
rJMFF012N04+ AAGGAAGTGGCATCAAATGGCCCTTCTGTAAATGATGACACTGGTACTCCAAAGGGGGCT
                      ____________________________________________________________
consensus AAGGAAGTGGCATCAAATGGCCCTTCTGTAAATGATGACACTGGTACTCCAAAGGGGGCT
 
. : . : . : . : . : . :
rJMFF002L13+ TCTGCAGCAATGAGTCAGGAATCNGGTAAAGATGCAGTAACCAGGGCTCCTCTTGAGAAG
rJMFF012N04+ TCTGCAGCAATGAGTCAGGAATCTGGTAAAGATGCAGTAACCAGGGCTCCTCTTGAGAAG
rJMFF015G10+ TGCAGCAATGAGTCAGGAATTTGGTAAAGATGCAGTAACCAGGGCTCNTCTTGAGAAG
                      ____________________________________________________________
consensus TCTGCAGCAATGAGTCAGGAATCTGGTAAAGATGCAGTAACCAGGGCTCCTCTTGAGAAG
 
. : . : . : . : . : . :
rJMFF002L13+ GCAAAGGAATCANAGAGNGATGAAGAGTCTAAAAGCGTGCCTTNTGAAGGAGAGGCAAAG
rJMFF012N04+ GCAAAGGAATCAAAGAGTGATGAAGAGTCTAAAAGCGTGCCTTCTGAAGGAGAGGCAAAG
rJMFF015G10+ GCAAAGGAATCAAAGAGTGATGAAGAGTCTAAAAGCGTGCCTTCTGAAGGAGAGGCAAAG
                      ____________________________________________________________
consensus GCAAAGGAATCAAAGAGTGATGAAGAGTCTAAAAGCGTGCCTTCTGAAGGAGAGGCAAAG
 
. : . : . : . : . : . :
rJMFF002L13+ GAAGANCCAGGTTCAAAATCAATAACTGTGCATAAAGCTGAAGCAGGTGGAGAAAAGGCC
rJMFF012N04+ GAAGAACCAGGTTCAAAATCAATAACTGTGCATAAAGCTGAAGCAGGTGGAGAAAAGGCC
rJMFF015G10+ GAAGAACCAGGTTCAAAATCAATAACTGTGCATAAAGCTGAAGCAGGTGGAGAAAAGGCC
                      ____________________________________________________________
consensus GAAGAACCAGGTTCAAAATCAATAACTGTGCATAAAGCTGAAGCAGGTGGAGAAAAGGCC
 
. : . : . : . : . : . :
rJMFF002L13+ AAGNACCAAGATAAGGACAGNGACAGGGATAAGGATAGAGNCAGGGAGAGGAAGAAGGAA
rJMFF012N04+ AAGGACCAAGATAAGGACAGAGACAGGGATAAGGATAGAGGCAGGGAGAGGAAGAAGGAA
rJMFF015G10+ AAGGACCAAGATAAGGACAGAGACAGGGATAAGGATAGAGGCAGGGAGAGGAAGAAGGAA
                      ____________________________________________________________
consensus AAGGACCAAGATAAGGACAGAGACAGGGATAAGGATAGAGGCAGGGAGAGGAAGAAGGAA
 
. : . : . : . : . : . :
rJMFF002L13+ AGATCAAAGTCATGGGNCCGTGATAGGGGAAGGGAATCTGACAGGGAAAGGGAGCGAGAG
rJMFF012N04+ AGATCAAAGTCATGGGACCGTGATAGGGGAAGGGAATCTGACAGGGAAAGGGAGCGAGAG
rJMFF015G10+ AGATCAAAGTCATGGGACCGTGATAGGGGAAGGGAATCTGACAGGGAAAGGGAGCGAGAG
                      ____________________________________________________________
consensus AGATCAAAGTCATGGGACCGTGATAGGGGAAGGGAATCTGACAGGGAAAGGGAGCGAGAG
 
. : . : . : . : . : . :
rJMFF002L13+ NATATNGAAAGGGAAAGGGATAGGGCCAAGGGGAGGGCCTTATCATTCAAGAGACAAAGG
rJMFF012N04+ GATATTGAAAGGGAAAGGGATAGGGCCAAGGGGAGGGGC-TAACATTCAAGAGACAAAGG
rJMFF015G10+ GATATTGAAAGGGAAAGGGATAGGGCCAAGGGGAGGGGC-TATCATTCAAGAGACAAAGG
                      ____________________________________________________________
consensus GATATTGAAAGGGAAAGGGATAGGGCCAAGGGGAGGGGC-TATCATTCAAGAGACAAAGG
 
. : . : . : . : . : . :
rJMFF002L13+ GCACCTGGAGAGGTCAAAACGTCACTCTTCTCGAGNTCGTGACTATCATAGTTCCTCGTA
rJMFF012N04+ GCACCTGGAGAGGTCAAAACGTCACTCTTCTCGAGATCGTGACTATCATAGTTCCTCGTA
rJMFF015G10+ GCACCTGGAGAGGTCAAAACGTCACTCTTCTCGAGATCGTGACTATCATAGTTCCTCGTA
                      ____________________________________________________________
consensus GCACCTGGAGAGGTCAAAACGTCACTCTTCTCGAGATCGTGACTATCATAGTTCCTCGTA
 
. : . : . : . : . : . :
rJMFF002L13+ TTCATCANGGGAGAAGGATCGCCGCAGACATCACTAATGTACAATCTTTGAACTGGNCAG
rJMFF012N04+ TTCATCAAGGGAGAAGGATCGCCGCAGACATCACTAATGTACAATCTTTGAACTGG-AAG
rJMFF015G10+ TTCATCAAGGGAGAAGGATCGCCGCAGACATCACTAATGTACAATCTTTGAACTGG-AAG
                      ____________________________________________________________
consensus TTCATCAAGGGAGAAGGATCGCCGCAGACATCACTAATGTACAATCTTTGAACTGG-AAG
 
. : . : . : . : . : . :
rJMFF002L13+ ATGAGTTTGTACTTTTAGCATTTCAGTTGGCTGNTAGACTGGTAGNTATGGTANGAAAAG
rJMFF012N04+ ATGAGTTTGTACTTTTAGCATTTCAGTTGGCTGGTAGACTGGTAGTTATGGTATGAAAAG
rJMFF015G10+ ATGAGTTTGTACTTTTAGCATTTCAGTTGGCTGGTAGACTGGTAGTTATGGTATGAAAAG
                      ____________________________________________________________
consensus ATGAGTTTGTACTTTTAGCATTTCAGTTGGCTGGTAGACTGGTAGTTATGGTATGAAAAG
 
. : . : . : . : . : . :
rJMFF002L13+ AGTTTACAGTTGTGGTGCTTAGGTGTT
rJMFF012N04+ AGTTTACAGTTGTGGTGCTTAGGTGTTATCTGCTATACTTGTTTGTATTACACCCGATTA
rJMFF015G10+ AGTTTACAGTTGTGGTGCTTAGGTGTTATCTGCTATACTTGTTTGTATTACACCCGATTA
                      ____________________________________________________________
consensus AGTTTACAGTTGTGGTGCTTAGGTGTTATCTGCTATACTTGTTTGTATTACACCCGATTA
 
. : . : . : . : . : . :
rJMFF012N04+ ATTATCTGTATAATGAGAAAAGAACTACTTTTAGCAAGTATATTCATACAGGATCAAACT
rJMFF015G10+ ATTATCTGTATAATGAGAAAAGAACTACTTTTAGCAAGTATATTCATACAGGATCAAACT
                      ____________________________________________________________
consensus ATTATCTGTATAATGAGAAAAGAACTACTTTTAGCAAGTATATTCATACAGGATCAAACT