| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013E10 | Sequence | 549 | 003978 (5) | ref|XP_004229791.1| | 5e-63 | PREDICTED: vesicle-associated protein 1-3 [Solanum lycopersicum] | 183 | 003978 (5) | |||
| JMSF013K23 | Sequence | 343 | 004217 (4) | gb|AAC26113.1| | 2e-68 | fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase [Solanum tuberosum] | 741 | 003978 (5) | ref|XP_004306946.1| | 5e-54 | PREDICTED: vesicle-associated protein 1-3 isoform X1 [Fragaria vesca subsp. ves |
| JMSF016O13 | Sequence | 459 | 003978 (5) | ref|XP_004229791.1| | 2e-63 | PREDICTED: vesicle-associated protein 1-3 [Solanum lycopersicum] | 768 | 003978 (5) | ref|XP_009793078.1| | 6e-74 | PREDICTED: vesicle-associated protein 1-3 isoform X1 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF016O13- TAGCTCTTCATTTTTTTTCTCAATTTCCATCC
JMFF013E10- GAGAGAAACCCTAGCTCTTCATTTTTTTTCTCAATTTCCATCC
____________________________________________________________
consensus GAGAGAAACCCTAGCTCTTCATTTTTTTTCTCAATTTCCATCC
. : . : . : . : . : . :
JMSF016O13- AAATTTGCAATCCCGCACCTGTATACTCGTAAACCCAGTTATTCAAAGCTTTGGAGCTAA
JMFF013E10- AAATTTGCAATCCCGCACCTGTATACTCGTAAACCCAGTTATTCAAAGCTTTGGAGCTAA
____________________________________________________________
consensus AAATTTGCAATCCCGCACCTGTATACTCGTAAACCCAGTTATTCAAAGCTTTGGAGCTAA
. : . : . : . : . : . :
JMSF016O13- TGGGCATGGGGGATTATCTGAATATTTATCCCGCAGAACTGAAATTCCAATTTGAGTTGA
JMFF013E10- TGGGCATGGGGGATTATCTGAATATTTATCCCGCAGAACTGAAATTCCAATTTGAGTTGA
____________________________________________________________
consensus TGGGCATGGGGGATTATCTGAATATTTATCCCGCAGAACTGAAATTCCAATTTGAGTTGA
. : . : . : . : . : . :
JMSF016O13- GGAAGCAGAGTACATGCTCCTTGCAACTGACCAACAAGACTGATAGGTATATTGCCTTCA
JMFF013E10- GGAAGCAGAGTACATGCTCCTTGCAACTGACCAACAAGACTGATAGGTATATTGCCTTCA
rJMSF016O13+ CAAGACTGATAGGTATATTGCCTTCA
____________________________________________________________
consensus GGAAGCAGAGTACATGCTCCTTGCAACTGACCAACAAGACTGATAGGTATATTGCCTTCA
. : . : . : . : . : . :
JMSF016O13- AGGTTAAAACGACTAACCCGAAGAAGTATTGTGTTCGCCCTAATGCTGGTGTTGTATTGC
JMFF013E10- AGGTTAAAACGACTAACCCGAAGAAGTATTGTGTTCGCCCTAATGCTGGTGTTGTATTGC
rJMSF016O13+ AGGTTAAAACGACTAACCCGAAGAAGTATTGTGTTCGCCCTAATGCTGGTGTTGTATTGC
rJMSF013K23+ GTGTTGTATTGC
____________________________________________________________
consensus AGGTTAAAACGACTAACCCGAAGAAGTATTGTGTTCGCCCTAATGCTGGTGTTGTATTGC
. : . : . : . : . : . :
JMSF016O13- CCAACTCCACCTGCAATGTTATTGTTACAATGCAGGCACCGAGGGAGGCTCCTCCTGATA
JMFF013E10- CCAACTCCACCTGCAATGTTATTGTTACAATGCAGGCACCGAGGGAGGCTCCTCCTGATA
rJMSF016O13+ CCAACTCCACCTGCAATGTTATTGTTACAATGCAGGCACCGAGGGAGGCTCCTCCTGATA
rJMSF013K23+ CCAACTCCACCTGCAATGTTATTGTTACAATGCAGGCACCGAGGGAGGCTCCTCCTGATA
____________________________________________________________
consensus CCAACTCCACCTGCAATGTTATTGTTACAATGCAGGCACCGAGGGAGGCTCCTCCTGATA
. : . : . : . : . : . :
JMSF016O13- TGCAACCCAAGGATAAGTTCCTAATTCAGAGCACTATTGCACCGGATGGTTCAACGTCTA
JMFF013E10- TGCAACCCAAGGATAAGTTCCTAATTCAGAGCACTATTGCACCGGATGGTTCAACGTCTA
rJMSF016O13+ TGCAACCCAAGGATAAGTTCCTAATTCAGAGCACTATTGCACCGGATGGTTCAACGTCTA
rJMSF013K23+ TGCAACCCAAGGATAAGTTCCTAATTCAGAGCACTATTGCACCGGATGGTTCAACGTCTA
____________________________________________________________
consensus TGCAACCCAAGGATAAGTTCCTAATTCAGAGCACTATTGCACCGGATGGTTCAACGTCTA
. : . : . : . : . : . :
JMSF016O13- AGGACTTGTCACCGGAATTGTTTAATATGGAGGCTGGGAAAGTTATCAATGAACTTAAAT
JMFF013E10- AGGACTTGTCACCGGAATTGTTTAATATGGAGGCTGGGAAAGTTATCAATGAACTTAAAT
rJMSF016O13+ AGGACTTGTCACCGGAATTGTTTAATATGGAGGCTGGGAAAGTTATCAATGAACTTAAAT
rJMSF013K23+ AGGACTTGTCACCGGAATTGTTTAATATGGAGGCTGGGAAAGTTATCAATGAACTTAAAT
____________________________________________________________
consensus AGGACTTGTCACCGGAATTGTTTAATATGGAGGCTGGGAAAGTTATCAATGAACTTAAAT
. : . : . : . : . : . :
JMSF016O13- TGAGG
JMFF013E10- TGAGGGTTGTTTATGTTCCCGCCAATCCTCCCTCACCAGTACCGGAAGAATCTGAAGAGG
rJMSF016O13+ TGAGGGTTGTTTATGTTCCCGCCAATCCTCCCTCACCAGTACCGGAAGAATCTGAAGAGG
rJMSF013K23+ TGAGGGTTGTTTATGTTCCCGCCAATCCTCCCTCACCAGTACCGGAAGAATCTGAAGAGG
____________________________________________________________
consensus TGAGGGTTGTTTATGTTCCCGCCAATCCTCCCTCACCAGTACCGGAAGAATCTGAAGAGG
. : . : . : . : . : . :
JMFF013E10- GTTCTCCTCCAAGAGCTTTGAATGAG
rJMSF016O13+ GTTCTCCTCCAAGAGCTTTGAATGAGAATGAAACTAAAGTTTCTTCGTTGTCACAGGCTG
rJMSF013K23+ GTTCTCCTCCAAGAGCTTTGAATGAGAATGAAACTAAAGTTTCTTCGTTGTCACAGGCTG
____________________________________________________________
consensus GTTCTCCTCCAAGAGCTTTGAATGAGAATGAAACTAAAGTTTCTTCGTTGTCACAGGCTG
. : . : . : . : . : . :
rJMSF016O13+ TATCAAGGTCTTTGGAGGAGCCCAAAGAAAAATTAGCATCTTCTGAGGCTTGGTCTTTGA
rJMSF013K23+ TATCAAGGTCTTTGGAGGAGCCCAAAGAAAAATTAGCATCTTCTGAGGCTTGGTCTTTGA
____________________________________________________________
consensus TATCAAGGTCTTTGGAGGAGCCCAAAGAAAAATTAGCATCTTCTGAGGCTTGGTCTTTGA
. : . : . : . : . : . :
rJMSF016O13+ TTTCAAGGCTGACAGAGGAGAAAGGTTCTGCGGTTCAACAGAATCAGAAGCTACGTCAGG
rJMSF013K23+ TTTCAAGGCTGACAGAGGAGAAAGGTTCTGCGGTTCAACAGAATCAGAAGCTACGTCAGG
____________________________________________________________
consensus TTTCAAGGCTGACAGAGGAGAAAGGTTCTGCGGTTCAACAGAATCAGAAGCTACGTCAGG
. : . : . : . : . : . :
rJMSF016O13+ AACTGGAGGCAGTAAGAAAAGAACTCAACAAAAGCAAAGCAGGCGGCTTCTCGGTGTTGT
rJMSF013K23+ AACTGGAGGCAGTAAGAAAAGAACTCAACAAAAGCAAAGCAGGCGGCTTCTCGGTGTTGT
____________________________________________________________
consensus AACTGGAGGCAGTAAGAAAAGAACTCAACAAAAGCAAAGCAGGCGGCTTCTCGGTGTTGT
. : . : . : . : . : . :
rJMSF016O13+ TTGTGGTGCTCGTTGGGCTACTAGGTATTCTGCTCGGGTACTTCATCAGGAAGCGTTAGA
rJMSF013K23+ TTGTGGTGCTCGTTGGGCTACTAGGTATTCTGCTCGGGTACTTCATCAGGAAGCGTTAGA
____________________________________________________________
consensus TTGTGGTGCTCGTTGGGCTACTAGGTATTCTGCTCGGGTACTTCATCAGGAAGCGTTAGA
. : . : . : . : . : . :
rJMSF016O13+ CGCTATTTGACAGGATTGTGGGGTGAGGCGATTTTCGACAGAATTGTGAATCAATCTCAA
rJMSF013K23+ CGCTATTTGACAGGATTGTGGGGTGAGGCGATTTTCGACAGAATTGTGAATCAATCTCAA
rJMFF013E10+ CAA
____________________________________________________________
consensus CGCTATTTGACAGGATTGTGGGGTGAGGCGATTTTCGACAGAATTGTGAATCAATCTCAA
. : . : . : . : . : . :
rJMSF016O13+ GCCATTTGTTGTTTAGTATATTTTGTGTTGGTGTTAAAATGTTGGGTCTTTAGACATTAT
rJMSF013K23+ GCCATTTGTTGTTTAGTATATTTTGTGTTGGTGTTAAAATGTTGGGTCTTTAGACATTAT
rJMFF013E10+ GCCATTTGTTGNTTAGTATATTTNGTGTTGGTGNTAAAATGTTGGGTCTTTAGACATTAT
____________________________________________________________
consensus GCCATTTGTTGTTTAGTATATTTTGTGTTGGTGTTAAAATGTTGGGTCTTTAGACATTAT
. : . : . : . : . : . :
rJMSF016O13+ GTATTTGTCTGACACAGAACAT
rJMSF013K23+ GTATTTGTCTGACACAGAACATTTTTCTTCTTTTACTAGGATAGACACATTCTTGGAAAC
rJMFF013E10+ GTATTTGTTTGACACAGAACATTTTTGTTCTTTTANTAGGATAGACACATTCTTGGAAAC
____________________________________________________________
consensus GTATTTGTCTGACACAGAACATTTTTGTTCTTTTACTAGGATAGACACATTCTTGGAAAC
. : . : . : . : . : . :
rJMSF013K23+ TTATACATA
rJMFF013E10+ TTATACATATGATTTTGCCAAAGAGTCAAACACAGAATAAATTGTGTCNCCNATTTTTTT
____________________________________________________________
consensus TTATACATATGATTTTGCCAAAGAGTCAAACACAGAATAAATTGTGTCNCCNATTTTTTT