Contig 003975:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN019N10+                                                              AGCGATAGA
rJMFF012L08+                                       GGCCCGGTTTTTACCACTCGAGAGCGATAGA
                      ____________________________________________________________
consensus                                          GGCCCGGTTTTTACCACTCGAGAGCGATAGA
 
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JMFN019N10+           GCTATCAAAGATGTGCATAATGGACACGCTTATTCTCAGAACCCTGTCCTTCCCTCACAG
rJMFF012L08+          GCTATCAAAGATGTGCATAATGGNCACGCTTATTNTCAGAACCCTGTCCTTCCCTCACAG
                      ____________________________________________________________
consensus             GCTATCAAAGATGTGCATAATGGACACGCTTATTCTCAGAACCCTGTCCTTCCCTCACAG
 
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JMFN019N10+           GGAATATCCCCACATTATGCAGCGTTCAGGACTAACTCGGGAAAGAACCAAGAAAAAT  
rJMFF012L08+          GGAATATCCCCACATTATGCAGCGTTCAGGACTAACTCGGGAAAGAACCAAGAAAAATAT
                      ____________________________________________________________
consensus             GGAATATCCCCACATTATGCAGCGTTCAGGACTAACTCGGGAAAGAACCAAGAAAAATAT
 
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rJMFF012L08+          GGAGCAGAAGTCGCAAAAGCGTCCTCTCAGATCAGAGTACCGCACATGCTGCAGCAGTCT
                      ____________________________________________________________
consensus             GGAGCAGAAGTCGCAAAAGCGTCCTCTCAGATCAGAGTACCGCACATGCTGCAGCAGTCT
 
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rJMFF012L08+          GATGCAAAGCTAACCCAGAAAACAAACAATGGGGGCGTCATTAACAGCAACCCATATTAC
                      ____________________________________________________________
consensus             GATGCAAAGCTAACCCAGAAAACAAACAATGGGGGCGTCATTAACAGCAACCCATATTAC
 
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rJMFF012L08+          CAGGCGCAAGCTAACGTGGGCCAGNTGAATAGCCAGATGGTCGCTCTCGACGCCAAACTT
                      ____________________________________________________________
consensus             CAGGCGCAAGCTAACGTGGGCCAGNTGAATAGCCAGATGGTCGCTCTCGACGCCAAACTT
 
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rJMFF012L08+          ATGCAGGCGCAATCTCAGTTCGGAGCGGTTGCCGCTCACCGAGAGGTTGGTGCTGTTCAG
                      ____________________________________________________________
consensus             ATGCAGGCGCAATCTCAGTTCGGAGCGGTTGCCGCTCACCGAGAGGTTGGTGCTGTTCAG
 
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rJMFF012L08+          TATGGTCTGACTTAGCAATCTGTTAGTTGATTTGATTGATCATTCCTAAGAGGAGTATCC
                      ____________________________________________________________
consensus             TATGGTCTGACTTAGCAATCTGTTAGTTGATTTGATTGATCATTCCTAAGAGGAGTATCC
 
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rJMFF012L08+          TTGTTTAGATATAGACATGAAAAATTTGAAGAGGAATGAAGCCTCCCCGCAATATGTCTC
                      ____________________________________________________________
consensus             TTGTTTAGATATAGACATGAAAAATTTGAAGAGGAATGAAGCCTCCCCGCAATATGTCTC
 
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rJMFF012L08+          TGCGGTTTAGTTAGCTCGTCGTGTGAAAATCATTCATTTTAGGGTACCCTCTTTTGATGA
                      ____________________________________________________________
consensus             TGCGGTTTAGTTAGCTCGTCGTGTGAAAATCATTCATTTTAGGGTACCCTCTTTTGATGA
 
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rJMFF012L08+          GTAACTACATATTTATGCCCCCCCATGTAAAGTCAAGTATTGTATCATTGATCTCCAGAA
                      ____________________________________________________________
consensus             GTAACTACATATTTATGCCCCCCCATGTAAAGTCAAGTATTGTATCATTGATCTCCAGAA