Contig 003974:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012H06Sequence588002145 (3)ref|XP_004233031.1|1e-49PREDICTED: serine/threonine-protein kinase EDR1-like [Solanum lycopersicum]714003974 (3)ref|XP_010277020.1|1e-107PREDICTED: tyrosine-protein kinase Fer-like isoform X2 [Nelumbo nucifera]
JMSF012M03Sequence492002145 (3)ref|XP_004233031.1|3e-14PREDICTED: serine/threonine-protein kinase EDR1-like [Solanum lycopersicum]764003974 (3)ref|XP_010277020.1|4e-135PREDICTED: tyrosine-protein kinase Fer-like isoform X2 [Nelumbo nucifera]
JMSF053E03Sequence621002145 (3)ref|XP_004233031.1|1e-40PREDICTED: serine/threonine-protein kinase EDR1-like [Solanum lycopersicum]931003974 (3)ref|XP_010277020.1|2e-170PREDICTED: tyrosine-protein kinase Fer-like isoform X2 [Nelumbo nucifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+                                                                  TGAT
                      ____________________________________________________________
consensus                                                                     TGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          ATGATCTCAAAGATTTGATGAAGTGCTGGAATCATCAAAACTTGTGANCAAGCCATTATT
                      ____________________________________________________________
consensus             ATGATCTCAAAGATTTGATGAAGTGCTGGAATCATCAAAACTTGTGANCAAGCCATTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          ACCATACGAGGAGTGGAATATTGATTTCTCGGAAATAAATATTGGAATACGCGTTGGGAT
                      ____________________________________________________________
consensus             ACCATACGAGGAGTGGAATATTGATTTCTCGGAAATAAATATTGGAATACGCGTTGGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          TGGATTTTTCGGAGAAGTTTTTCGTGGGATTTGGAATGGAATCGAGGTTGCAGTAAAAGT
                      ____________________________________________________________
consensus             TGGATTTTTCGGAGAAGTTTTTCGTGGGATTTGGAATGGAATCGAGGTTGCAGTAAAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          TTACCTGGAACAAGACTTGAGCACAGAAAACATTGAAGATTTTGCCAATGAAATACCTTT
rJMSF012M03+          TTACCTGGAACAAGACNTGAGCACAGAAAACATTGAAGATTTTGCCAATGAAATACCTTT
                      ____________________________________________________________
consensus             TTACCTGGAACAAGACTTGAGCACAGAAAACATTGAAGATTTTGCCAATGAAATACCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          ATTGAGCCGTATTCGCCATCCAAACGTCATTCTGTTTCTTGGTGCTTGCACAAAACCTCC
rJMSF012M03+          ATTGAGCCGTATTCGCCATCCAAACGTCATTCTGTTTCTTGGTGCTTGCACAAAACCTCC
                      ____________________________________________________________
consensus             ATTGAGCCGTATTCGCCATCCAAACGTCATTCTGTTTCTTGGTGCTTGCACAAAACCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          TCGGTTATCCATGGTAACTGAATTTATGGAGATGGGATCACTGTATCATCTGATCCATGC
rJMSF012M03+          TCGGTTATCCATGGTAACTGAATTTATGGAGATGGGATCACTGTATCATCTGATCCATGC
rJMFF012H06+                ATCCATGGTAACTGAATTTATGGAGATGGGATCACTGTATCATCTGATCCATGC
                      ____________________________________________________________
consensus             TCGGTTATCCATGGTAACTGAATTTATGGAGATGGGATCACTGTATCATCTGATCCATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          GAGTGGGCAGAAAAATAAACTCAGCTGGCGAAGGAGGCTGAAAATGCTTTGCGATATATG
rJMSF012M03+          GAGTGGGCAGAAAAATAAACTCAGCTGGCGAAGGAGGCTGAAAATGCTTTGCGATATATG
rJMFF012H06+          GAGTGGGCAGAAAAATAAACTCAGCTGGCGAAGGAGGCTGAAAATGCTTTGCGATATATG
                      ____________________________________________________________
consensus             GAGTGGGCAGAAAAATAAACTCAGCTGGCGAAGGAGGCTGAAAATGCTTTGCGATATATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          CAGGGGCTTGATATGCATTCACCGAATGAAAATTGCCCACCGGGATCTAAAGAGCGCAAA
rJMSF012M03+          CAGGGGCTTGATATGCATTCACCGAATGAAAATTGCCCACCGGGATCTAAAGAGCGCAAA
rJMFF012H06+          CAGGGGCTTGATATGCATTCACCGAATGAAAATTGCCCACCGGGATCTAAAGAGCGCAAA
                      ____________________________________________________________
consensus             CAGGGGCTTGATATGCATTCACCGAATGAAAATTGCCCACCGGGATCTAAAGAGCGCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          CTGCCTTGTAAATAAAAACTGGAAAGTCAAGATTTGTGATTTCGGCCTCTCCAGGTTACT
rJMSF012M03+          CTGCCTTGTAAATAAAAACTGGAAAGTCAAGATTTGTGATTTCGGCCTCTCCAGGTTACT
rJMFF012H06+          CTGCCTTGTAAATAAAAACTGGAAAGTCAAGATTTGTGATTTCGGCCTCTCCAGGTTACT
                      ____________________________________________________________
consensus             CTGCCTTGTAAATAAAAACTGGAAAGTCAAGATTTGTGATTTCGGCCTCTCCAGGTTACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          GACTACAACCCCCATGAGAGATTCTTCAGCAGCCGGTACTCCAGAATGGATGGCCCCCGA
rJMSF012M03+          GACTACAACCCCCATGAGAGATTCTTCAGCAGCCGGTACTCCAGAATGGATGGCCCCCGA
rJMFF012H06+          GACTACAACCCCCATGAGAGATTCTTCAGCAGCCGGTACTCCAGAATGGATGGCCCCCGA
                      ____________________________________________________________
consensus             GACTACAACCCCCATGAGAGATTCTTCAGCAGCCGGTACTCCAGAATGGATGGCCCCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          GCTCATCCGCAATGAACCCTTCACAGAAAAATGCGACATTTTCAGCCTTGGCGTTATAAT
rJMSF012M03+          GCTCATCCGCAATGAACCCTTCACAGAAAAATGCGACATTTTCAGCCTTGGCGTTATAAT
rJMFF012H06+          GCTCATCCGCAATGAACCCTTCACAGAAAAATGCGACATTTTCAGCCTTGGCGTTATAAT
                      ____________________________________________________________
consensus             GCTCATCCGCAATGAACCCTTCACAGAAAAATGCGACATTTTCAGCCTTGGCGTTATAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          ATGGGAGTTCTTCACACTCAACAGGCCATGGGACGGTGTACCATCTGTCCAGGTAGTATA
rJMSF012M03+          ATGGGAGTTCTTCACACTCAACAGGCCATGGGACGGTGTACCATCTGTCCAGGTAGTATA
rJMFF012H06+          ATGGGAGCTCTTCACACTCAACAGGCCATGGGACGGTGTACCATCTGTCCAGGTAGTATA
                      ____________________________________________________________
consensus             ATGGGAGTTCTTCACACTCAACAGGCCATGGGACGGTGTACCATCTGTCCAGGTAGTATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          TGCTGTCGCTAATGATGGAAAACGGCTATCGATCCCTGAAGGTCCTGTGGGGAAGCTTAT
rJMSF012M03+          TGCTGTCGCTAATGATGGAAAACGGCTATCGATCCCTGAAGGTCCTGTGGGGAAGCTTAT
rJMFF012H06+          TGCTGTCGCTAATGATGGAAAACGGCTATCGATCCCTGAAGGTCCTGTGGGGAAGCTTAT
                      ____________________________________________________________
consensus             TGCTGTCGCTAATGATGGAAAACGGCTATCGATCCCTGAAGGTCCTGTGGGGAAGCTTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          AGCAGATTGCTGGGCAGGACCAGATGAAAGGCCTAGCTGTCAGCAAGTTTTGTCAAGCCT
rJMSF012M03+          AGCAGATTGCTGGGCAGGACCAGATGAAAGGCCTAGCTGTCAGCAAGTTTTGTCAAGCCT
rJMFF012H06+          AGCAGATTGCTGGGCAGGACCAGATGAAAGGCCTAGCTGTCAGCAAGTTTTGTCAAGCCT
                      ____________________________________________________________
consensus             AGCAGATTGCTGGGCAGGACCAGATGAAAGGCCTAGCTGTCAGCAAGTTTTGTCAAGCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          GCTTGAACTTGAGTACACTGTTTACTAATGGATTCTTCCCATCTTTGATGAAACACAAAA
rJMSF012M03+          GCTTGAACTTGAGTACACTGTTTACTAATGGATTCTTCCCATCTTTGATGAAACACAAAA
rJMFF012H06+          GCTTGAACTTGAGTACACTGTTTACTAATGGATTCTTCCCATCTTTGATGAAACACAAAA
                      ____________________________________________________________
consensus             GCTTGAACTTGAGTACACTGTTTACTAATGGATTCTTCCCATCTTTGATGAAACACAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF053E03+          TGAATTGTCTGAGGAATCTG                                        
rJMSF012M03+          TGAATTGTCTGAGGAATCTG                                        
rJMFF012H06+          TGAATTGTCTGAGGAATCTGTAAATATTGCGTTTTATGTTTAAGATTTTTGGCTTCTGAA
                      ____________________________________________________________
consensus             TGAATTGTCTGAGGAATCTGTAAATATTGCGTTTTATGTTTAAGATTTTTGGCTTCTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF012H06+          CAGATTACTTTTCAACACTGCCATTCACAAAATTGAATTTTGTATATCTGCAACTCAAAT
                      ____________________________________________________________
consensus             CAGATTACTTTTCAACACTGCCATTCACAAAATTGAATTTTGTATATCTGCAACTCAAAT