Contig 003972:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011I23Sequence597003972 (8)ref|XP_009620301.1|87.0PREDICTED: uncharacterized protein LOC104112161 [Nicotiana tomentosiformis]735003972 (8)ref|XP_009620301.1|238PREDICTED: uncharacterized protein LOC104112161 [Nicotiana tomentosiformis]
JMFF036D05Sequence560003972 (8)ref|XP_009620301.1|159PREDICTED: uncharacterized protein LOC104112161 [Nicotiana tomentosiformis]691003972 (8)ref|XP_009620301.1|229PREDICTED: uncharacterized protein LOC104112161 [Nicotiana tomentosiformis]
JMSF003I14Sequence449003972 (8)ref|XP_009620301.1|68.2PREDICTED: uncharacterized protein LOC104112161 [Nicotiana tomentosiformis]711003972 (8)ref|XP_009620301.1|241PREDICTED: uncharacterized protein LOC104112161 [Nicotiana tomentosiformis]
JMSF029H15Sequence660003972 (8)ref|XP_009620301.1|223PREDICTED: uncharacterized protein LOC104112161 [Nicotiana tomentosiformis]729003972 (8)ref|XP_009620301.1|241PREDICTED: uncharacterized protein LOC104112161 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF003I14-                                GAACTTTCACAAAGTCTTGGAAGCTCCTGGTGCCACACA
JMFF011I23-                                                                CCACACA
JMSF029H15-                                                                      A
                      ____________________________________________________________
consensus                                  GAACTTTCACAAAGTCTTGGAAGCTCCTGGTGCCACACA
 
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JMSF003I14-           ACTTTGAGCATTTGCGGAAACTTCAATGGCTTCTGCACTCATGGCTTCTCAAACCCTAAT
JMFF011I23-           ACTTTGAGCATTTGCGGAAACTTCAATGGCTTCTGCACTCATGGCTTCTCAAACCCTAAT
JMFF036D05-                    ATTTGCGGAAACTTCAATGGCTTCTGCACTCATGGCTTCTCAAACCCTAAT
JMSF029H15-           ACTTTGAGCATTTGCGGAAACTTCAATGGCTTCTGCACTCATGGCTTCTCAAACCCTAAT
                      ____________________________________________________________
consensus             ACTTTGAGCATTTGCGGAAACTTCAATGGCTTCTGCACTCATGGCTTCTCAAACCCTAAT
 
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JMSF003I14-           TCTCCAAACCCCTACCTATCTTCAACCTCTCACCTCTGTTGCTCCAACCCATAATCGAAT
JMFF011I23-           TCTCCAAACCCCTACCTATCTTCAACCTCTCACCTCTGTTGCTCCAACCCATAATCGAAT
JMFF036D05-           TCTCCAAACCCCTACCTATCTTCAACCTCTCACCTCTGTTGCTCCAACCCATAATCGAAT
JMSF029H15-           TCTCCAAACCCCTACCTATCTTCAACCTCTCACCTCTGTTGCTCCAACCCATAATCGAAT
                      ____________________________________________________________
consensus             TCTCCAAACCCCTACCTATCTTCAACCTCTCACCTCTGTTGCTCCAACCCATAATCGAAT
 
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JMSF003I14-           TCTCCTACCACGAACCCTATCCGCGCGGTCACTACCCACTCTCTCCGCCAAATTTCCCAA
JMFF011I23-           TCTCCTACCACGAACCCTATCCACGCGGTCACTACCCACTCTCTCCGCCAAATTTCCCAA
JMFF036D05-           TCTCCTACCACGAACCCTATCCGCGCGGTCACTACCCACTCTCTCCGCCAAATTTCCCAA
JMSF029H15-           TCTCCTACCACGAACCCTATCCGCGCGGTCACTACCCACTCTCTCCGCCAAATTTCCCAA
rJMSF029H15+                   ACGAACCCTATCCGCGCGGTCACTACCCACTCTTTCCGCCAAATTTCCCAA
rJMSF003I14+                                                         CCAAATTTCCCAA
rJMFF011I23+                                                     TCCGCCAAATTTCCCAA
                      ____________________________________________________________
consensus             TCTCCTACCACGAACCCTATCCGCGCGGTCACTACCCACTCTCTCCGCCAAATTTCCCAA
 
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JMSF003I14-           CAAATCGCGAGTTTCGGCTTCATCCCAGGTTGCCCTGCCCACCCGTTCATCGGATGACCT
JMFF011I23-           CAAATCGCGAGTTTCGGCTTCATCCCAGGTTGCCCTGCCCACCCGTTCATCGGATGACCT
JMFF036D05-           CAAATCGCGAGTTTCGGCTTCATCCCAGGTTGCCCTGCCCACCCGTTCATCGGATGACCT
JMSF029H15-           CAAATCGCGAGTTTCGGCTTCATCCCAGGTTGCCCTGCCCACCCGTTCATCGGATGACCT
rJMSF029H15+          CAAATCGCGAGTTTCGGCTTCATCCCAGGTTGCCCTGCCCACCCGTTCATCGGATGACCT
rJMSF003I14+          CAAATCGCGAGTTTCGGCTTCATCCCAGGTTGCCCTGCCCACCCGTTCATCGGATGACCT
rJMFF036D05+                         GGCTTCATCCCAGGTTGCCCTGCCCACCCGTTCATCGGATGACCT
rJMFF011I23+          CAAATCGCGAGTTTCGGCTTCATCCCAGGTTGCCCTGCCCACCCGTTCATCGGATGACCT
                      ____________________________________________________________
consensus             CAAATCGCGAGTTTCGGCTTCATCCCAGGTTGCCCTGCCCACCCGTTCATCGGATGACCT
 
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JMSF003I14-           GAAACTGAAAAT-CCCCGCCGAGTCGCTGCTCACCGGGCCAACCCGCACGATCGCAACCC
JMFF011I23-           GAAACTGAAAAT-CCCCGCCGAGTCGCTGCTCACCGGGCCAACCCGCACGATCGCAACCC
JMFF036D05-           GAAACTGAAAAT-CCCCGCCGAGTCGCTGCTCACCGGGCCAACCCGCACGATCGCAACCC
JMSF029H15-           GAAACTGAAAAT-CCCCGCCGAGTCGCTGCTCACCGGGCCAACCCGCACGATCGCAACCC
rJMSF029H15+          GAAACTGAAAAT-CCCCGCCGAGTCGCTGCTCACCGGGCCAACCCGCACGATCGCAACCC
rJMSF003I14+          GAAACTGAAAAT-CCCCGCCGAGTCGCTGCTCACCGGGCCAACCCGCACGATCGCAACCC
rJMFF036D05+          GAAACTGAAAATCCCCCGCCGAGTCGCTGCTCACCGGGCCAACCCGCACGATCGCAACCC
rJMFF011I23+          GAAACTGAAAAT-CCCCGCCGAGTCGCTGCTCACCGGGCCAACCCGCACGATCGCAACCC
                      ____________________________________________________________
consensus             GAAACTGAAAAT-CCCCGCCGAGTCGCTGCTCACCGGGCCAACCCGCACGATCGCAACCC
 
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JMSF003I14-           TCTTCGTATTCGCGCTTGGAGTCTCCAAAGTTGTGGCCCACAAAGTCCTCGATTTGGGTC
JMFF011I23-           TCTTCGTATTCGCGCTTGGAGTCTCCAAAGTTGTGGCCAACAAAGTCCTCGATTTGGGTC
JMFF036D05-           TCTTCGTATTCGCGCTTGGAGTCTCCAAAGTTGTGGCCCACAAAGTCCTCGATTTGGGTC
JMSF029H15-           TCTTCGTATTCGCGCTTGGAGTCTCCAAAGTTGTGGCCCACAAAGTCCTCGATTTGGGTC
rJMSF029H15+          TCTTCGTATTCGCGCTTGGAGTCTCCAAAGTTGTGGCCCACAAAGTCCTCGATTTGGGTC
rJMSF003I14+          TCTTCGTATTCGCGCTTGGAGTCTCCAAAGTTGTGGCCCACAAAGTCCTCGATTTGGGTC
rJMFF036D05+          TCTTCGTATTCGCGCTTGGAGTCTCCAAAGTTGTGGCCCACAAAGTCCTCGATTTGGGTC
rJMFF011I23+          TCTTCGTATTCGCGCTTGGAGTCTCCAAAGTTGTGGCCAACAAAGTCCTCGATTTGGGTC
                      ____________________________________________________________
consensus             TCTTCGTATTCGCGCTTGGAGTCTCCAAAGTTGTGGCCCACAAAGTCCTCGATTTGGGTC
 
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JMSF003I14-           TGCATCTGAATGGATTTCAGGGACTCCAGCGGGCTTTGGTGTGCTCTGCGG         
JMFF011I23-           TGCATCTGAATGGATTTCAGGGACTCCAGCGGGCTTTGGTGTGCTCTGCGGGGCCCCTGT
JMFF036D05-           TGCATCTGAATGGATTTCAGGGACTCCAGCGGGCTTTGGTGTGCTCTGCGGGGCCCCTGT
JMSF029H15-           TGCATCTGAATGGATTTCAGGGACTCCAGCGGGCTTTGGTGTGCTCTGCGGGGCCCCTGT
rJMSF029H15+          TGCATCTGAATGGATTTCAGGGACTCCAGCGGGCTTTGGTGTGCTCTGCGGGGCCCCTGT
rJMSF003I14+          TGCATCTGAATGGATTTCAGGGACTCCAGCGGGCTTTGGTGTGCTCTGCGGGGCCCCTGT
rJMFF036D05+          TGCATCTGAATGGATTTCAGGGACTCCAGCGGGCTTTGGTGTGCTCTGCGGGGCCCCTGT
rJMFF011I23+          TGCATCTGAATGGATTTCAGGGACTCCAGCGGGCTTTGGTGTGCTCTGCGGGGCCCCTGT
                      ____________________________________________________________
consensus             TGCATCTGAATGGATTTCAGGGACTCCAGCGGGCTTTGGTGTGCTCTGCGGGGCCCCTGT
 
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JMFF011I23-           TTTTCGCCGCAAGGAGCTCGCTTGATTCCACTGCTTTGAATACGCCGGCTCACCGTGGTT
JMFF036D05-           TTTTCGCCGCAAGGAGCTCGCTTGATTCCACTGCTTTGAATACGCC-GCTCACCGTGGTT
JMSF029H15-           TTTTCGCCGCAAGGAGCTCGCTTGATTCCACTGCTTTGAATACGCC-GCTCACCGTGGTT
rJMSF029H15+          TTTTCGCCGCAAGGAGCTCGCTTGATTCCACTGCTTTGAATACGCC-GCTCACCGTGGTT
rJMSF003I14+          TTTTCGCCGCAAGGAGCTCGCTTGATTCCACTGCTTTGAATACGCC-GCTCACCGTGGTT
rJMFF036D05+          TTTTCGCCGCAAGGAGCTCGCTTGATTCCACTGCTTTGAATACGCC-GCTCACCGTGGTT
rJMFF011I23+          TTTTCGCCGCAAGGAGCTCGCTTGATTCCACTGCTTTGAATACGCC-GCTCACCGTGGTT
                      ____________________________________________________________
consensus             TTTTCGCCGCAAGGAGCTCGCTTGATTCCACTGCTTTGAATACGCC-GCTCACCGTGGTT
 
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JMFF011I23-           GCTGCGGGGATGGCGAAATGGCTTGATATCTACAGTGGGGTTTTGATGGTCAGGGTTTTG
JMFF036D05-           GCTGCGGGGATGGCGAAATGGCTTGATATCTACAGTGGGGTTTTGATGGTCAGGGTTTTG
JMSF029H15-           GCTGCGGGGATGGCGAAATGGCTTGATATCTACAGTGGGGTTTTGATGGTCAGGGTTTTG
rJMSF029H15+          GCTGCGGGGATGGCGAAATGGCTTGATATCTACAGTGGGGTTTTGATGGTCAGGGTTTTG
rJMSF003I14+          GCTGCGGGGATGGCGAAATGGCTTGATATCTACAGTGGGGTTTTGATGGTCAGGGTTTTG
rJMFF036D05+          GCTGCGGGGATGGCGAAATGGCTTGATATCTACAGTGGGGTTTTGATGGTCAGGGTTTTG
rJMFF011I23+          GCTGCGGGGATGGCGAAATGGCTTGATATCTACAGTGGGGTTTTGATGGTCAGGGTTTTG
                      ____________________________________________________________
consensus             GCTGCGGGGATGGCGAAATGGCTTGATATCTACAGTGGGGTTTTGATGGTCAGGGTTTTG
 
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JMFF011I23-           CTCAGCTGGTTTCCGAATATACCCTGGGAAAGGCAGCCATTGTCAGC             
JMFF036D05-           CTCAGCTGGTTTCCGAATATACCCTGGGAAA                             
JMSF029H15-           CTCAGCTGGTTTCCGAATATACCCTGGGAAAGGCAGCCATTGTCAGCCATTAGGGACCTC
rJMSF029H15+          CTCAGCTGGTTTCCGAATATACCCTGGGAAAGGCAGCCATTGTCAGCCATTAGGGACCTC
rJMSF003I14+          CTCAGCTGGTTTCCGAATATACCCTGGGAAAGGCAGCCATTGTCAGCCATTAGGGACCTC
rJMFF036D05+          CTCAGCTGGTTTCCGAATATACCCTGGGAAAGGCAGCCATTGTCAGCCATTAGGGACCCC
rJMFF011I23+          CTCAGCTGGTTTCCGAATATACCCTGGGAAAGGCAGCCATTGTCAGCCATTAGGGACCTC
                      ____________________________________________________________
consensus             CTCAGCTGGTTTCCGAATATACCCTGGGAAAGGCAGCCATTGTCAGCCATTAGGGACCTC
 
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JMSF029H15-           TGTGATCCGTATTTGAATCTCTTCAGGAACATCATCCCCCCTGTTTTTGATACTTTGGAT
rJMSF029H15+          TGTGATCCGTATTTGAATCTCTTCAGGAACATCATCCCCCCTGTTTTTGATACTTTGGAT
rJMSF003I14+          TGTGATCCGTATTTGAATCTCTTCAGGAACATCATCCCCCCTGTTTTTGATACTTTGGAT
rJMFF036D05+          TGTGATCCGTATTTGAATCTCTTCAGGAACATCATCCCCCCTGTTTTTGATACTTTGGAT
rJMFF011I23+          TGTGATCCGTATTTGAATCTCTTCAGGAACATCATCCCCCCTGTTTTTGATACTTTGGAT
                      ____________________________________________________________
consensus             TGTGATCCGTATTTGAATCTCTTCAGGAACATCATCCCCCCTGTTTTTGATACTTTGGAT
 
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rJMSF029H15+          GTTAGTCCCCTTCTGGCTTTTGCAGTATTGGGTGCACTTGGTTCGATCCTGAGCACCACT
rJMSF003I14+          GTTAGTCCCCTTCTGGCTTTTGCAGTATTGGGTGCACTTGGTTCGATCCTGAGCACCACT
rJMFF036D05+          GTTAGTCCCCTTCTGGCTTTTGCAGTATTGGGTGCACTTGGTTCGATCCTGAGCACCACT
rJMFF011I23+          GTTAGTCCCCTTCTGGCTTTTGCAGTATTGGGTGCACTTGGTTCGATCCTGAGCACCACT
                      ____________________________________________________________
consensus             GTTAGTCCCCTTCTGGCTTTTGCAGTATTGGGTGCACTTGGTTCGATCCTGAGCACCACT
 
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rJMSF029H15+          AGCACTAAGGGTCTCTGAGGCGAATTGAAGGAGACACATGATTTTTGCAGGCACACTTGT
rJMSF003I14+          AGCACTAAGGGTCTCTGAGGCGAATTGAAGGAGACACATGATTTTTGCAGGCACACTTGT
rJMFF036D05+          AGCACTAAGGGTCTCTGAGGCGAATTGAAGGAGACACATGATTTTTGCAGGCACACTTGT
rJMFF011I23+          AGCACTAAGGGTCTCTGAGGCGAATTGAAGGAGACACATGATTTTTGCAGGCACACTTGT
                      ____________________________________________________________
consensus             AGCACTAAGGGTCTCTGAGGCGAATTGAAGGAGACACATGATTTTTGCAGGCACACTTGT
 
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rJMSF029H15+          ATCCAGTAAGGATTAAATACAATACTATGTTGAATTCCCTCGTTCTTCCCTGCGTGTAAT
rJMSF003I14+          ATCCAGTAAGGATTAAATACAATACTATGTTGAATTCCCTCGTTCTTCCCTGCGTGTAAT
rJMFF036D05+          ATCCAGTAAGGATTAAATACAATACTATGTTGAATTCCCTCGTTCTTCCCTGCGTGTAAT
rJMFF011I23+          ATCCAGTAAGGATTAAATACAATACTATGTTGAATTCCCTCGTTCTTCCCTGCGTGTAAT
                      ____________________________________________________________
consensus             ATCCAGTAAGGATTAAATACAATACTATGTTGAATTCCCTCGTTCTTCCCTGCGTGTAAT
 
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rJMSF029H15+          TGAAATTTGAGGCTGTAATG                                        
rJMSF003I14+          TGAAATTTGAGGCTGTAATGGTTTTGTAGTTCCT                          
rJMFF036D05+          TGAAATTTGAGGCTGTAATGGTTTTGTAGTTCCT                          
rJMFF011I23+          TGAAATTTGAGGCTGTAATGGTTTTGTAGTTCCTTGGAACTTTTTATTCAATCCTATTAG
                      ____________________________________________________________
consensus             TGAAATTTGAGGCTGTAATGGTTTTGTAGTTCCTTGGAACTTTTTATTCAATCCTATTAG