Contig 003970:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011D22Sequence541001601 (2)ref|XP_009617167.1|4e-77PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nico712003970 (2)ref|XP_009617167.1|7e-65PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nico
JMSF006G13Sequence435001601 (2)ref|XP_009617167.1|3e-55PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nico528003970 (2)ref|XP_009617167.1|2e-41PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nico

Alignment

This contig is upended


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rJMFF011D22+                  CTGGTGGCTATTTGGGAGCTGAGTTTGAGGATTCAATGGAGCCTTTTTCCCC
                      ____________________________________________________________
consensus                     CTGGTGGCTATTTGGGAGCTGAGTTTGAGGATTCAATGGAGCCTTTTTCCCC
 
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rJMFF011D22+          AGGATTGTTTTCAAATATTGACTCTCAGATGTCTGTTGGCCATGGATTTTCTTATGACAT
                      ____________________________________________________________
consensus             AGGATTGTTTTCAAATATTGACTCTCAGATGTCTGTTGGCCATGGATTTTCTTATGACAT
 
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rJMSF006G13+                                                               CCCCGGC
rJMFF011D22+          AAGTTCAAGACCATTGTCGTCAAGAGAGAAAAAGTGGCTTGTTGGACTTCAGTCCCCGGC
                      ____________________________________________________________
consensus             AAGTTCAAGACCATTGTCGTCAAGAGAGAAAAAGTGGCTTGTTGGACTTCAGTCCCCGGC
 
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rJMSF006G13+          AACTCCACAAGAGATAATGACTCAAGTTCTGGGAGCCATGCAAGAATTGAATGTTCGGTG
rJMFF011D22+          AACTCCACAAGAGATAATGACTCAAGTTCTGGGAGCCATGCAAGAATTGAATGTTCGGTG
                      ____________________________________________________________
consensus             AACTCCACAAGAGATAATGACTCAAGTTCTGGGAGCCATGCAAGAATTGAATGTTCGGTG
 
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rJMSF006G13+          GAAAAAAATCGGACACTATAATATGAAGTGCATGTGGTGCTATTCGCATAATNCAATTCG
rJMFF011D22+          GAAAAAAATCGGACACTATAATATGAAGTGCATGTGGTGCTATTCGCATAATCCAATTCG
                      ____________________________________________________________
consensus             GAAAAAAATCGGACACTATAATATGAAGTGCATGTGGTGCTATTCGCATAATCCAATTCG
 
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rJMSF006G13+          TACTACAACCAACAATTGTATGAGTGATGACTGTATTACTGTTAGTCAAACTGCTGCAAA
rJMFF011D22+          TACTACAACCAACAATTGTATGAGTGATGACTGTATTACTGTTAGTCAAACTGCTGCAAA
                      ____________________________________________________________
consensus             TACTACAACCAACAATTGTATGAGTGATGACTGTATTACTGTTAGTCAAACTGCTGCAAA
 
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rJMSF006G13+          TGCAAATGGTCTACTGTCTCAAGTTGTGGTGAAGTTTGAAATGCAGCTTTACAAAACTCC
rJMFF011D22+          TGCAAATGGTCTACTGTCTCAAGTTGTGGTGAAGTTTGAAATGCAGCTTTACAAAACTCC
                      ____________________________________________________________
consensus             TGCAAATGGTCTACTGTCTCAAGTTGTGGTGAAGTTTGAAATGCAGCTTTACAAAACTCC
 
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rJMSF006G13+          GGAAGACAAATATCTGCTGGATCTACAGAGAATAAGCGGCCCGCAGTTTCTGTTTCTGGA
rJMFF011D22+          GGAAGACAAATATCTGCTGGATCTACAGAGAATAAGCGGCCCGCAGTTTCTGTTTCTGGA
                      ____________________________________________________________
consensus             GGAAGACAAATATCTGCTGGATCTACAGAGAATAAGCGGCCCGCAGTTTCTGTTTCTGGA
 
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rJMSF006G13+          TTTCTGTGCTATTTTTATTGTCCATCTCAAAGTCACCTAGTCCCAAGAGAAGAAGAATTT
rJMFF011D22+          TTTCTGTGCTATTTTTATTGTCCATCTCAAAGTCACCTAGTCCCAAGAGAAGAAGAATTT
                      ____________________________________________________________
consensus             TTTCTGTGCTATTTTTATTGTCCATCTCAAAGTCACCTAGTCCCAAGAGAAGAAGAATTT
 
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rJMSF006G13+          CTAGAGCTGAAGCAATGGCATTCTTGAGAATGACAAACTGATGTATATAACTTGTGTTTA
rJMFF011D22+          CTAGAGCTGAAGCAATGGCATTCTTGAGAATGACAAACTGATGTATATAACTTGTGTTTA
                      ____________________________________________________________
consensus             CTAGAGCTGAAGCAATGGCATTCTTGAGAATGACAAACTGATGTATATAACTTGTGTTTA
 
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rJMSF006G13+          CACATAGTTTGTTGTTTAAAATTTGTAGACCTGAAGCATTGGCACACCACTAGAATGAGA
rJMFF011D22+          CACATAGTTTGTTGTTTAAAATTTGTAGACCTGAAGCATTGGCACACCACTAGAATGAGA
                      ____________________________________________________________
consensus             CACATAGTTTGTTGTTTAAAATTTGTAGACCTGAAGCATTGGCACACCACTAGAATGAGA
 
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rJMSF006G13+          AACTGATGTATATACACTTGTAGTGTTGACATATAGTTTGT                   
rJMFF011D22+          AACTGATGTATATACACTTGTAGTGTTGACATATAGTTTGTTGTTTACACTAAAAAGCTT
                      ____________________________________________________________
consensus             AACTGATGTATATACACTTGTAGTGTTGACATATAGTTTGTTGTTTACACTAAAAAGCTT