Contig 003969:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006P09Sequence533000051 (9)ref|XP_009620762.1|2e-76PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X1 [Nicotia703003969 (8)
JMFF011B24Sequence525000051 (9)ref|XP_009803761.1|6e-76PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl684003969 (8)
JMFF014B05Sequence524000051 (9)ref|XP_009803761.1|6e-76PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl474003969 (8)
JMFF014O03Sequence687003969 (8)
JMFF019I06Sequence525000051 (9)ref|XP_009803761.1|6e-76PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl616003969 (8)
JMFF029K03Sequence525000051 (9)ref|XP_009803761.1|4e-59PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl661003969 (8)
JMFF034L06Sequence521000051 (9)ref|XP_009803761.1|4e-75PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nicotiana syl666003969 (8)
JMFF037A24Sequence627000051 (9)ref|XP_009620765.1|8e-101PREDICTED: uncharacterized protein At3g15000, mitochondrial isoform X4 [Nicotia650003969 (8)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF014O03+ GGCCCAANCCAGGGCAANTATG
rJMFF034L06+ CCAAACCAGGGCAACTATG
rJMFF029K03+ GGCCCAAACCAGGGCAACTATG
rJMFF006P09+ GCCAAANTATCAACNTGCTCCAGGCCCAAACCAGGGCAACTATG
rJMFF011B24+ GGCCCAAACCAGGGCAANTATG
                      ____________________________________________________________
consensus GCCAAANTATCAACNTGCTCCAGGCCCAAACCAGGGCAACTATG
 
. : . : . : . : . : . :
rJMFF014O03+ CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF034L06+ CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF029K03+ CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF006P09+ CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF019I06+ CGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF037A24+ CCAAACCAGGGAAACTTNGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF011B24+ CGCNGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
                      ____________________________________________________________
consensus CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
 
. : . : . : . : . : . :
rJMFF014O03+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTNTGCTTCATGGCCAAACCAGAACAGCT
rJMFF034L06+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTNTGCTTCATGGCCAAACCAGAACAGCT
rJMFF029K03+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
rJMFF006P09+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
rJMFF019I06+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
rJMFF037A24+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
rJMFF011B24+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
                      ____________________________________________________________
consensus GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
 
. : . : . : . : . : . :
rJMFF014O03+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF034L06+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF029K03+ CTGCCCCAGTCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF006P09+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF019I06+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF037A24+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF011B24+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
                      ____________________________________________________________
consensus CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
 
. : . : . : . : . : . :
rJMFF014O03+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF034L06+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF029K03+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF014B05+ CCAANCCAGCNCAATTNCCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF006P09+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF019I06+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF037A24+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF011B24+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
                      ____________________________________________________________
consensus CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
 
. : . : . : . : . : . :
rJMFF014O03+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF034L06+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF029K03+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGG------CCAAACT
rJMFF014B05+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF006P09+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF019I06+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF037A24+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF011B24+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
                      ____________________________________________________________
consensus CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
 
. : . : . : . : . : . :
rJMFF014O03+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF034L06+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF029K03+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF014B05+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF006P09+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF019I06+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF037A24+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF011B24+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
                      ____________________________________________________________
consensus ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
 
. : . : . : . : . : . :
rJMFF014O03+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF034L06+ CCCAGAATCAGAACATCCCCCCTNCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF029K03+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF014B05+ CCCAGAATCAGAACATCCCCCCTTCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF006P09+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF019I06+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF037A24+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF011B24+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
                      ____________________________________________________________
consensus CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
 
. : . : . : . : . : . :
rJMFF014O03+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF034L06+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF029K03+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF014B05+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF006P09+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF019I06+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF037A24+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF011B24+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
                      ____________________________________________________________
consensus AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
 
. : . : . : . : . : . :
rJMFF014O03+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF034L06+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF029K03+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF014B05+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF006P09+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF019I06+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF037A24+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF011B24+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
                      ____________________________________________________________
consensus TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
 
. : . : . : . : . : . :
rJMFF014O03+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF034L06+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF029K03+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF014B05+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF006P09+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF019I06+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF037A24+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF011B24+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
                      ____________________________________________________________
consensus GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
 
. : . : . : . : . : . :
rJMFF014O03+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGT
rJMFF034L06+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCG
rJMFF029K03+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGC
rJMFF014B05+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGT
rJMFF006P09+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGT
rJMFF019I06+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCG
rJMFF037A24+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGT
rJMFF011B24+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGTT
                      ____________________________________________________________
consensus TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGTT