Contig 003967:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010M09Sequence616014164ref|XP_009804234.1|3e-25PREDICTED: uncharacterized protein LOC104249497 isoform X1 [Nicotiana sylvestri735003967 (4)emb|CAN60319.1|3e-68hypothetical protein VITISV_002853 [Vitis vinifera]
JMFF024D05Sequence485006250 (3)ref|XP_009593261.1|113PREDICTED: uncharacterized protein LOC104089947 [Nicotiana tomentosiformis]798003967 (4)gb|AAT40555.2|2e-83Translation elongation factor, putative [Solanum demissum]
JMSF001G24Sequence289006250 (3)ref|XP_009593261.1|60.1PREDICTED: uncharacterized protein LOC104089947 [Nicotiana tomentosiformis]774003967 (4)gb|AAT40555.2|1e-83Translation elongation factor, putative [Solanum demissum]
JMSF002C01Sequence397003521 (4)803003967 (4)gb|AAT40555.2|4e-83Translation elongation factor, putative [Solanum demissum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF001G24+ CGAGATGTGTTGTTTGCAAATGCT
rJMSF002C01+ AATGGGAGAAAGAANTACGAGATGTGTTGTTTGCAAATGCT
rJMFF024D05+ CGAGATGTGTTGTTTGCAAATGCT
                      ____________________________________________________________
consensus AATGGGAGAAAGAANTACGAGATGTGTTGTTTGCAAATGCT
 
. : . : . : . : . : . :
rJMSF001G24+ GACTATCTTAATTCAATACAGGTTCCATTTGAATTTGCTGTTAAACAAGTATTGGAACAA
rJMSF002C01+ GACTATCTTAATTCAATACAGGTTTCATTTGAATTTGCTGTTAAACAAGTATTGGAACAA
rJMFF024D05+ GACTATCTTAATTCAATACAGGTTCCATTTGAATTTGCTGTTAAACAAGTATTGGAACAA
rJMFF010M09+ CAAGTATTGGAACAA
                      ____________________________________________________________
consensus GACTATCTTAATTCAATACAGGTTCCATTTGAATTTGCTGTTAAACAAGTATTGGAACAA
 
. : . : . : . : . : . :
rJMSF001G24+ CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
rJMSF002C01+ CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
rJMFF024D05+ CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
rJMFF010M09+ CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
                      ____________________________________________________________
consensus CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
 
. : . : . : . : . : . :
rJMSF001G24+ GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAATCCAAAGTCTTCTTGATAATTTGGCT
rJMSF002C01+ GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAATCCAAAGTCTTCTTGATAATTTGGCT
rJMFF024D05+ GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAATCCAAAGTCTTCTTGATAATTTGGCT
rJMFF010M09+ GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAGTCCAAAGTCTTCTTGATAATTTGGCT
                      ____________________________________________________________
consensus GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAATCCAAAGTCTTCTTGATAATTTGGCT
 
. : . : . : . : . : . :
rJMSF001G24+ AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
rJMSF002C01+ AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
rJMFF024D05+ AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
rJMFF010M09+ AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
                      ____________________________________________________________
consensus AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
 
. : . : . : . : . : . :
rJMSF001G24+ AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAGCTCTTGCAAGTTTT
rJMSF002C01+ AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAACTCTTGCAAGTTTT
rJMFF024D05+ AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAGCTCTTGCAAGTTTT
rJMFF010M09+ AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAGCTCTTGCAAGTTTT
                      ____________________________________________________________
consensus AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAGCTCTTGCAAGTTTT
 
. : . : . : . : . : . :
rJMSF001G24+ GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
rJMSF002C01+ GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
rJMFF024D05+ GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
rJMFF010M09+ GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
                      ____________________________________________________________
consensus GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
 
. : . : . : . : . : . :
rJMSF001G24+ GTGGCTGCACTTGAAGCTTGCATTGGCTCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
rJMSF002C01+ GTGGCTGCACTTGAAGCTTGCATTGGCTCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
rJMFF024D05+ GTGGCTGCACTTGAAGCTTGCATTGGCTCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
rJMFF010M09+ GTGGCTGCACTTGAAGCTTGCATTGGATCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
                      ____________________________________________________________
consensus GTGGCTGCACTTGAAGCTTGCATTGGCTCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
 
. : . : . : . : . : . :
rJMSF001G24+ GAATGGTCTCACGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
rJMSF002C01+ GAATGGTCTCATGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
rJMFF024D05+ GAATGGTCTCACGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
rJMFF010M09+ GAATGGTCTCACGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
                      ____________________________________________________________
consensus GAATGGTCTCACGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
 
. : . : . : . : . : . :
rJMSF001G24+ CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACCCATTGCA
rJMSF002C01+ CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACTCATTGCA
rJMFF024D05+ CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACCCATTGCA
rJMFF010M09+ CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACCCATTGCA
                      ____________________________________________________________
consensus CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACCCATTGCA
 
. : . : . : . : . : . :
rJMSF001G24+ ATAACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
rJMSF002C01+ ATGACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
rJMFF024D05+ ATAACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
rJMFF010M09+ ATAACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
                      ____________________________________________________________
consensus ATAACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
 
. : . : . : . : . : . :
rJMSF001G24+ TTCAATATGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
rJMSF002C01+ TTAAATACGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
rJMFF024D05+ TTCAATATGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
rJMFF010M09+ TTCAATATGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
                      ____________________________________________________________
consensus TTCAATATGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
 
. : . : . : . : . : . :
rJMSF001G24+ TGCAAGAAATTAAAGGAGTACTTATAGGCGTTGGAATTAGGAATGCTGCATAGTCGTCAG
rJMSF002C01+ TGCAAGAAATTAAAGGAGTACT--TAGGCGTTGAAATAAGGAATGCTGCATAGTCGTCAG
rJMFF024D05+ TGCAAGAAATTAAAGGAGTACTTATAGGCGTTGGAATTAGGAATGCTGCATAGTCGTCAG
rJMFF010M09+ TGCAAGAAATTTAAGGAGTACTAATAGGCGTTGAAATTAGGAATGCTGCATAGTCGTCAG
                      ____________________________________________________________
consensus TGCAAGAAATTAAAGGAGTACTTATAGGCGTTGGAATTAGGAATGCTGCATAGTCGTCAG
 
. : . : . : . : . : . :
rJMSF001G24+ CTCTTCAAAATTCGTTTGTATAGAACAT
rJMSF002C01+ CTCTTCAAAATTCATTTGTATAGAACATTGTATT
rJMFF024D05+ CTCTTCAAAATTCGTTTGTATAGAACATTGTATTTACTCTTGATC
rJMFF010M09+ CTCTTCAAAATTCATTTGTATAGAACATTGTATTTACTCTTGATCCTAGAGTAATAGAGG
                      ____________________________________________________________
consensus CTCTTCAAAATTCGTTTGTATAGAACATTGTATTTACTCTTGATCCTAGAGTAATAGAGG