| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010M09 | Sequence | 616 | 014164 | ref|XP_009804234.1| | 3e-25 | PREDICTED: uncharacterized protein LOC104249497 isoform X1 [Nicotiana sylvestri | 735 | 003967 (4) | emb|CAN60319.1| | 3e-68 | hypothetical protein VITISV_002853 [Vitis vinifera] |
| JMFF024D05 | Sequence | 485 | 006250 (3) | ref|XP_009593261.1| | 113 | PREDICTED: uncharacterized protein LOC104089947 [Nicotiana tomentosiformis] | 798 | 003967 (4) | gb|AAT40555.2| | 2e-83 | Translation elongation factor, putative [Solanum demissum] |
| JMSF001G24 | Sequence | 289 | 006250 (3) | ref|XP_009593261.1| | 60.1 | PREDICTED: uncharacterized protein LOC104089947 [Nicotiana tomentosiformis] | 774 | 003967 (4) | gb|AAT40555.2| | 1e-83 | Translation elongation factor, putative [Solanum demissum] |
| JMSF002C01 | Sequence | 397 | 003521 (4) | 803 | 003967 (4) | gb|AAT40555.2| | 4e-83 | Translation elongation factor, putative [Solanum demissum] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF001G24+ CGAGATGTGTTGTTTGCAAATGCT
rJMSF002C01+ AATGGGAGAAAGAANTACGAGATGTGTTGTTTGCAAATGCT
rJMFF024D05+ CGAGATGTGTTGTTTGCAAATGCT
____________________________________________________________
consensus AATGGGAGAAAGAANTACGAGATGTGTTGTTTGCAAATGCT
. : . : . : . : . : . :
rJMSF001G24+ GACTATCTTAATTCAATACAGGTTCCATTTGAATTTGCTGTTAAACAAGTATTGGAACAA
rJMSF002C01+ GACTATCTTAATTCAATACAGGTTTCATTTGAATTTGCTGTTAAACAAGTATTGGAACAA
rJMFF024D05+ GACTATCTTAATTCAATACAGGTTCCATTTGAATTTGCTGTTAAACAAGTATTGGAACAA
rJMFF010M09+ CAAGTATTGGAACAA
____________________________________________________________
consensus GACTATCTTAATTCAATACAGGTTCCATTTGAATTTGCTGTTAAACAAGTATTGGAACAA
. : . : . : . : . : . :
rJMSF001G24+ CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
rJMSF002C01+ CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
rJMFF024D05+ CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
rJMFF010M09+ CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
____________________________________________________________
consensus CTGAGGGCTATTGCTACGGGTGAGACACCAGCAATTGAGAAGAGGAAGCTTGGAACAATT
. : . : . : . : . : . :
rJMSF001G24+ GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAATCCAAAGTCTTCTTGATAATTTGGCT
rJMSF002C01+ GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAATCCAAAGTCTTCTTGATAATTTGGCT
rJMFF024D05+ GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAATCCAAAGTCTTCTTGATAATTTGGCT
rJMFF010M09+ GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAGTCCAAAGTCTTCTTGATAATTTGGCT
____________________________________________________________
consensus GTGTTTGCTGCCGTCAGCTTGCCTGTTACAGAAATCCAAAGTCTTCTTGATAATTTGGCT
. : . : . : . : . : . :
rJMSF001G24+ AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
rJMSF002C01+ AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
rJMFF024D05+ AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
rJMFF010M09+ AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
____________________________________________________________
consensus AAGAATGACTCTGAAGCCGGAGCTTTTCTTAAGGACAAAAACTTGGGAAGCCACCTTCAA
. : . : . : . : . : . :
rJMSF001G24+ AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAGCTCTTGCAAGTTTT
rJMSF002C01+ AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAACTCTTGCAAGTTTT
rJMFF024D05+ AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAGCTCTTGCAAGTTTT
rJMFF010M09+ AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAGCTCTTGCAAGTTTT
____________________________________________________________
consensus AAGGCCCACGTGACGCTTGCTCATAAAGGAAGTCACAGTGTGGCAGCTCTTGCAAGTTTT
. : . : . : . : . : . :
rJMSF001G24+ GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
rJMSF002C01+ GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
rJMFF024D05+ GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
rJMFF010M09+ GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
____________________________________________________________
consensus GCTCCCTTTCTTCATCAACAGGTGCCTGTAGAAATGACGGCTCTATTATTCTCTGAAAGG
. : . : . : . : . : . :
rJMSF001G24+ GTGGCTGCACTTGAAGCTTGCATTGGCTCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
rJMSF002C01+ GTGGCTGCACTTGAAGCTTGCATTGGCTCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
rJMFF024D05+ GTGGCTGCACTTGAAGCTTGCATTGGCTCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
rJMFF010M09+ GTGGCTGCACTTGAAGCTTGCATTGGATCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
____________________________________________________________
consensus GTGGCTGCACTTGAAGCTTGCATTGGCTCTATTAATGGTGAAAAGATTCAGTCTAAAAAT
. : . : . : . : . : . :
rJMSF001G24+ GAATGGTCTCACGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
rJMSF002C01+ GAATGGTCTCATGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
rJMFF024D05+ GAATGGTCTCACGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
rJMFF010M09+ GAATGGTCTCACGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
____________________________________________________________
consensus GAATGGTCTCACGTGACATTATGGACCAGCAAAGGAACTGCGCCTGTAGAAGCCAATTCA
. : . : . : . : . : . :
rJMSF001G24+ CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACCCATTGCA
rJMSF002C01+ CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACTCATTGCA
rJMFF024D05+ CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACCCATTGCA
rJMFF010M09+ CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACCCATTGCA
____________________________________________________________
consensus CTACCGCAATTACTTCAAGAAGGAAAGGCCAAGCGTGTTGAGGTTGAGCCACCCATTGCA
. : . : . : . : . : . :
rJMSF001G24+ ATAACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
rJMSF002C01+ ATGACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
rJMFF024D05+ ATAACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
rJMFF010M09+ ATAACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
____________________________________________________________
consensus ATAACAGGAGTCATTCAATTCTATTAATTGCTGTTTTCATTCAGTTTCTTATGAAAATAA
. : . : . : . : . : . :
rJMSF001G24+ TTCAATATGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
rJMSF002C01+ TTAAATACGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
rJMFF024D05+ TTCAATATGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
rJMFF010M09+ TTCAATATGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
____________________________________________________________
consensus TTCAATATGTGAACTGCAAAAAATGGCAATTTTGAATGCCTAGTTTGGGGGTATGAATTT
. : . : . : . : . : . :
rJMSF001G24+ TGCAAGAAATTAAAGGAGTACTTATAGGCGTTGGAATTAGGAATGCTGCATAGTCGTCAG
rJMSF002C01+ TGCAAGAAATTAAAGGAGTACT--TAGGCGTTGAAATAAGGAATGCTGCATAGTCGTCAG
rJMFF024D05+ TGCAAGAAATTAAAGGAGTACTTATAGGCGTTGGAATTAGGAATGCTGCATAGTCGTCAG
rJMFF010M09+ TGCAAGAAATTTAAGGAGTACTAATAGGCGTTGAAATTAGGAATGCTGCATAGTCGTCAG
____________________________________________________________
consensus TGCAAGAAATTAAAGGAGTACTTATAGGCGTTGGAATTAGGAATGCTGCATAGTCGTCAG
. : . : . : . : . : . :
rJMSF001G24+ CTCTTCAAAATTCGTTTGTATAGAACAT
rJMSF002C01+ CTCTTCAAAATTCATTTGTATAGAACATTGTATT
rJMFF024D05+ CTCTTCAAAATTCGTTTGTATAGAACATTGTATTTACTCTTGATC
rJMFF010M09+ CTCTTCAAAATTCATTTGTATAGAACATTGTATTTACTCTTGATCCTAGAGTAATAGAGG
____________________________________________________________
consensus CTCTTCAAAATTCGTTTGTATAGAACATTGTATTTACTCTTGATCCTAGAGTAATAGAGG