Contig 003965:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010I09Sequence598004488 (2)ref|XP_011086852.1|6e-59PREDICTED: uncharacterized protein At2g33490 [Sesamum indicum]641003965 (2)emb|CDP13398.1|4e-08unnamed protein product [Coffea canephora]
JMSF043A02Sequence259004488 (2)gb|KHG10542.1|4e-32hypothetical protein F383_16390 [Gossypium arboreum]810003965 (2)emb|CDP13398.1|2e-10unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043A02+ ACTGAAAAAANCATGGCCAAACAATCCATCCTTTTCTACTAG
                      ____________________________________________________________
consensus ACTGAAAAAANCATGGCCAAACAATCCATCCTTTTCTACTAG
 
. : . : . : . : . : . :
rJMSF043A02+ TGGTCCAATGCTCTCTACAGGGGTACACTCAGCAGCGATTTTCTGGATCTCTCTTGCGCA
                      ____________________________________________________________
consensus TGGTCCAATGCTCTCTACAGGGGTACACTCAGCAGCGATTTTCTGGATCTCTCTTGCGCA
 
. : . : . : . : . : . :
rJMSF043A02+ CTCCTCTACCCCAGCCTTCATCAACTCCAAAGTTTGCTTCACTTTCTTCTTCTCCTCCAT
                      ____________________________________________________________
consensus CTCCTCTACCCCAGCCTTCATCAACTCCAAAGTTTGCTTCACTTTCTTCTTCTCCTCCAT
 
. : . : . : . : . : . :
rJMSF043A02+ TCATGTCATCCTCACCTAAAATTAGTGAGCTGCACGAGTTACCAAGACCGCCACCCAATT
rJMFF010I09+ AATTAGTGAGCTGCACGAGTTACCAAGACCGCCACCCAATT
                      ____________________________________________________________
consensus TCATGTCATCCTCACCTAAAATTAGTGAGCTGCACGAGTTACCAAGACCGCCACCCAATT
 
. : . : . : . : . : . :
rJMSF043A02+ TATCTTCCCCAACACCACCCTCAAATCTTGTTGCTCATTCAGGGCCGTTGGCTTCTAAGG
rJMFF010I09+ TATCTTCCCCAACACCACCCTCAAATCTTGTTGCTCATTCAGGGCCGTTGGCTTCTAAGG
                      ____________________________________________________________
consensus TATCTTCCCCAACACCACCCTCAAATCTTGTTGCTCATTCAGGGCCGTTGGCTTCTAAGG
 
. : . : . : . : . : . :
rJMSF043A02+ GTCCAGGGCTTTCTCCTACATACAGGACAGCATCTACACTCCCCGTGCCTCCTACAGCTT
rJMFF010I09+ GTCCAGGGCTTTCTCCTACATACAGGACAGCATCTACACTCCCCGTGCCTCCTACAGCTT
                      ____________________________________________________________
consensus GTCCAGGGCTTTCTCCTACATACAGGACAGCATCTACACTCCCCGTGCCTCCTACAGCTT
 
. : . : . : . : . : . :
rJMSF043A02+ TCCCTCGTAGTTATTCAATACCCATCAGAGGCGAAACTGAAACAGCATTGCGGGCATCTA
rJMFF010I09+ TCCCTCGTAGTTATTCAATACCCATCAGAGGCGAAACTGAAACAGCATTGCGGGCATCTA
                      ____________________________________________________________
consensus TCCCTCGTAGTTATTCAATACCCATCAGAGGCGAAACTGAAACAGCATTGCGGGCATCTA
 
. : . : . : . : . : . :
rJMSF043A02+ AGCCTGTAATAGATGTTCCTTCATCTCCTTCGGTTTCACTGCCCTTGTCAAACATACAAC
rJMFF010I09+ AGCCTGTAATAGATGTTCCTTCATCTCCTTCGGTTTCACTGCCCTTGTCAAACATACAAC
                      ____________________________________________________________
consensus AGCCTGTAATAGATGTTCCTTCATCTCCTTCGGTTTCACTGCCCTTGTCAAACATACAAC
 
. : . : . : . : . : . :
rJMSF043A02+ AACCTACACCTCCTGCTTCCTGAGCCTTTATATCAAGTGAAAGGTACCCAAGACAACCCT
rJMFF010I09+ AACCTACACCTCCTGCTTCCTGAGCCTTTATATCAAGTGAAAGGTACCCAAGACAACCCT
                      ____________________________________________________________
consensus AACCTACACCTCCTGCTTCCTGAGCCTTTATATCAAGTGAAAGGTACCCAAGACAACCCT
 
. : . : . : . : . : . :
rJMSF043A02+ CATGGGCTTTAAATAAGTTCTTCATCATTTGCTTTTCTGTTCTAAGTTTATTTCTGTAAC
rJMFF010I09+ CATGGGCTTTAAATAAGTTCTTCATCATTTGCTTTTCTGTTCTAAGTTTATTTCTGTAAC
                      ____________________________________________________________
consensus CATGGGCTTTAAATAAGTTCTTCATCATTTGCTTTTCTGTTCTAAGTTTATTTCTGTAAC
 
. : . : . : . : . : . :
rJMSF043A02+ TGGGTGTACTTCTGGTCAGTGGAAGGCTCATGCAGAGAGATTTTGTAATGCAGCCCAAAG
rJMFF010I09+ TGGGTGTACTTCTGGTCAGTGGAAGGCTCATGCAGAGAGATTTTGTAATGCAGCCCAAAG
                      ____________________________________________________________
consensus TGGGTGTACTTCTGGTCAGTGGAAGGCTCATGCAGAGAGATTTTGTAATGCAGCCCAAAG
 
. : . : . : . : . : . :
rJMSF043A02+ TGGGGTATATAGCATAGGACTTAGGGGCATAGTTCTTCTTTCTTGGGGTTCAGTTTCAGG
rJMFF010I09+ TGGGGTATATAGCATAGGACTTAGGGGCATAGTTCTTCTTTCTTGGGGTTCAGTTTCAGG
                      ____________________________________________________________
consensus TGGGGTATATAGCATAGGACTTAGGGGCATAGTTCTTCTTTCTTGGGGTTCAGTTTCAGG
 
. : . : . : . : . : . :
rJMSF043A02+ CTCATAGCTATATACATACATACTGTACAAAGTGTGCCACCAGGAAAGAGAACAAGCCTA
rJMFF010I09+ CTCATAGCTATATACATACATACTGTACAAAGTGTGCCACCAGGAAAGAGAACAAGCCTA
                      ____________________________________________________________
consensus CTCATAGCTATATACATACATACTGTACAAAGTGTGCCACCAGGAAAGAGAACAAGCCTA
 
. : . : . : . : . : . :
rJMSF043A02+ TTTTGTCTTGTTTCAATTAGTTTGATTTTTTCTAAAACCATGTAGTAC
rJMFF010I09+ TTTTGTCTTGTTTCAATTAGTTTGATTTTTTCTAAAACCATGTAGTACTTAAACTTTTTT
                      ____________________________________________________________
consensus TTTTGTCTTGTTTCAATTAGTTTGATTTTTTCTAAAACCATGTAGTACTTAAACTTTTTT