Contig 003963:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010A23Sequence505007312 (2)emb|CDO97628.1|2e-38unnamed protein product [Coffea canephora]739003963 (2)
JMFF024L11Sequence488007312 (2)emb|CDO97628.1|2e-36unnamed protein product [Coffea canephora]770003963 (2)

Alignment

This contig is upended


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rJMFF024L11+               TCAAGAAGGGGAGGTCNTTCTGGATATGGTTCCCGTGGCCATGAGAAGCAAGTAT
rJMFF010A23+                                                   GGCCATGAGAAGCAAGTAT
                      ____________________________________________________________
consensus                  TCAAGAAGGGGAGGTCNTTCTGGATATGGTTCCCGTGGCCATGAGAAGCAAGTAT
 
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rJMFF024L11+          GGGTCCAAAGGTCAAGTTCTGGTTCTTAATTTTGTTAATTATGTGAAATTCTTGGTTGTC
rJMFF010A23+          GGGTCCAAAGGTCAAGTTCTGGTTCTTAATTTTGTTAATTATGTGAAATTCTTGGTTGTC
                      ____________________________________________________________
consensus             GGGTCCAAAGGTCAAGTTCTGGTTCTTAATTTTGTTAATTATGTGAAATTCTTGGTTGTC
 
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rJMFF024L11+          TACCATATTAAAAAGTATACCCTGTAGTGGCTGGAGCCCCCACTCTTTGCTCAAACGGGT
rJMFF010A23+          TACCATATTAAAAAGTATACCCTGTAGTGGCTGGAGCCCCCACTCTTTGCTCAAACGGGT
                      ____________________________________________________________
consensus             TACCATATTAAAAAGTATACCCTGTAGTGGCTGGAGCCCCCACTCTTTGCTCAAACGGGT
 
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rJMFF024L11+          CATGAGTGAGCCAAGGTTGCTGAGGCCAAGATTTGAAGATCTTCAGCGGAACTTTGAGTC
rJMFF010A23+          CATGAGTGAGCCAAGGTTGCTGAGGCCAAGATTTGAAGATCTTCAGCGGAACTTTGAGTC
                      ____________________________________________________________
consensus             CATGAGTGAGCCAAGGTTGCTGAGGCCAAGATTTGAAGATCTTCAGCGGAACTTTGAGTC
 
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rJMFF024L11+          GCCTGACACCTAAGATATTGCCGTGTTTATGTTCAGCGAGGTGAACATTTGATAACAATG
rJMFF010A23+          GCCTGACACCTAAGATATTGCCGTGTTTATGTTCAGCGAGGTGAACATTTGATAACAATG
                      ____________________________________________________________
consensus             GCCTGACACCTAAGATATTGCCGTGTTTATGTTCAGCGAGGTGAACATTTGATAACAATG
 
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rJMFF024L11+          ATGGAACAGGACAGGTGCGTCATTTCAACCACACAATCAACACCACAATTTTAACCGGGG
rJMFF010A23+          ATGGAACAGGACAGGTGCGTCATTTCAACCACACAATCAACACCACAATTTTAACCGGGG
                      ____________________________________________________________
consensus             ATGGAACAGGACAGGTGCGTCATTTCAACCACACAATCAACACCACAATTTTAACCGGGG
 
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rJMFF024L11+          TGTTTACTTTGACTCGCTGCGGTCCTTTTCATCAGAGGAGAGCCATGGACGCACTGTTCC
rJMFF010A23+          TGTTTACTTTGACTCGCTGCGGTCCTTTTCATCAGAGGAGAGCCATGGACGCACTGTTCC
                      ____________________________________________________________
consensus             TGTTTACTTTGACTCGCTGCGGTCCTTTTCATCAGAGGAGAGCCATGGACGCACTGTTCC
 
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rJMFF024L11+          TGGCTTCCCCGCCTTTGACTCAGGAGGTTATCAAGATATTTAGTTCCATAGGTGGTTGTC
rJMFF010A23+          TGGCTTCCCCGCCTTTGACTCAGGAGGTTATCAAGATATTTAGTTCCATAGGTGGTTGTC
                      ____________________________________________________________
consensus             TGGCTTCCCCGCCTTTGACTCAGGAGGTTATCAAGATATTTAGTTCCATAGGTGGTTGTC
 
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rJMFF024L11+          GAGATATTTAGTTCTACAGGCGAATGAATGCTTTTGTTTTCGTTGGATGTATATACAAAA
rJMFF010A23+          GAGATATTTAGTTCTACAGGCGAATGAATGCTTTTGTTTTCGTTGGATGTATATACAAAA
                      ____________________________________________________________
consensus             GAGATATTTAGTTCTACAGGCGAATGAATGCTTTTGTTTTCGTTGGATGTATATACAAAA
 
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rJMFF024L11+          ATACGGGATTGTGTGAATGCTCTCTATAGTTCCCATTGCGGATATGGCAATAGAGTAATA
rJMFF010A23+          ATACGGGATTGTGTGAATGCTCTCTATAGTTCCCATTGCGGATATGGCAATAGAGTAATA
                      ____________________________________________________________
consensus             ATACGGGATTGTGTGAATGCTCTCTATAGTTCCCATTGCGGATATGGCAATAGAGTAATA
 
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rJMFF024L11+          GCCTTATGGCTGATGGTAATGCTAGGCTTGACTTGACTGATTGGGGTTTCTGAAAGAAGA
rJMFF010A23+          GCCTTATGGCTGATGGTAATGCTAGGCTTGACTTGACTGATTGGGGTTTCTGAAAGAAGA
                      ____________________________________________________________
consensus             GCCTTATGGCTGATGGTAATGCTAGGCTTGACTTGACTGATTGGGGTTTCTGAAAGAAGA
 
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rJMFF024L11+          TTGCTTGTTGTTGATGACATTCTTCTGAGTATTTTAACTTATGAAGGGGAATCAGATTTG
rJMFF010A23+          TTGCTTGTTGTTGATGACATTCTTCTGAGTATTTTAACTTATGAAGGGGAATCAGATTTG
                      ____________________________________________________________
consensus             TTGCTTGTTGTTGATGACATTCTTCTGAGTATTTTAACTTATGAAGGGGAATCAGATTTG
 
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rJMFF024L11+          CTTAGATTCTAATTTCCCAAGTTATGGGAATAATTGTAGTTATGGAGGGTGTTGC     
rJMFF010A23+          CTTAGATTCTAATTTCCCAAGTTATGGGAATAATTGTAGTTATGGAGGGTGTTGCTGAAA
                      ____________________________________________________________
consensus             CTTAGATTCTAATTTCCCAAGTTATGGGAATAATTGTAGTTATGGAGGGTGTTGCTGAAA