Contig 003962:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010A08Sequence519007785 (4)emb|CDO98842.1|4e-19unnamed protein product [Coffea canephora]694003962 (3)ref|XP_011091061.1|5e-98PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto aci
JMFF027C15Sequence518007785 (4)emb|CDO98842.1|3e-26unnamed protein product [Coffea canephora]696003962 (3)ref|XP_011091061.1|6e-98PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto aci
JMSF009O24Sequence278007785 (4)796003962 (3)ref|XP_011091061.1|5e-121PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto aci

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009O24+ CTGCTGCAAAATTCCTCATTTCATTATGTTGAAGAG
                      ____________________________________________________________
consensus CTGCTGCAAAATTCCTCATTTCATTATGTTGAAGAG
 
. : . : . : . : . : . :
rJMSF009O24+ ATAAATTGTAATGCACTTGTAGAGCTCAAAGGATCATTCCAAAAGGAAAACTCTGATCCA
                      ____________________________________________________________
consensus ATAAATTGTAATGCACTTGTAGAGCTCAAAGGATCATTCCAAAAGGAAAACTCTGATCCA
 
. : . : . : . : . : . :
rJMSF009O24+ GAAGTCAAACACAGTTTTCTTCCTTTCTTAATAAAGTCTCTTTCCATGGCTTTGAATAAA
rJMFF027C15+ CTTAATAAAGTCTCTTTCCATGGCTTTGAATAAA
rJMFF010A08+ CTTAATAAAGTCTCTTTCCATGGCTTTGAATAAA
                      ____________________________________________________________
consensus GAAGTCAAACACAGTTTTCTTCCTTTCTTAATAAAGTCTCTTTCCATGGCTTTGAATAAA
 
. : . : . : . : . : . :
rJMSF009O24+ TATCCCATGCTAAACAGTTGCTTCAAAGAGGAACTTTATGAGGTCACTGTTAAAGGATCT
rJMFF027C15+ TATCCCATGCTAAACAGTTGCTTCAAAGAGGAACTTTATGAGGTCACTGTTAAAGGATCT
rJMFF010A08+ TATCCCATGCTAAACAGTTGCTTCAAAGAGGAACTTTATGAGGTCACTGTTAAAGGATCT
                      ____________________________________________________________
consensus TATCCCATGCTAAACAGTTGCTTCAAAGAGGAACTTTATGAGGTCACTGTTAAAGGATCT
 
. : . : . : . : . : . :
rJMSF009O24+ CACAACATTGGGATTGCAATGGCTACTCCACATGGTTTAGTTGTTCCAAACATAAAGAAG
rJMFF027C15+ CACAACATTGGGATTGCAATGGCTACTCCACATGGTTTAGTTGTTCCAAACATAAAGAAG
rJMFF010A08+ CACAACATTGGGATTGCAATGGCTACTCCACATGGTTTAGTTGTTCCAAACATAAAGAAG
                      ____________________________________________________________
consensus CACAACATTGGGATTGCAATGGCTACTCCACATGGTTTAGTTGTTCCAAACATAAAGAAG
 
. : . : . : . : . : . :
rJMSF009O24+ GTGCAGTCGTTATCAATCTTGGAGATAACGAAGGAACTTTCAAGACTGCAAAAGTTGGCA
rJMFF027C15+ GTGCAGTCGTTATCAATCTTGGAGATAACGAAGGAACTTTCAAGACTGCAAAAGTTGGCA
rJMFF010A08+ GTGCAGTCGTTATCAATCTTGGAGATAACGAAGGAACTTTCAAGACTGCAAAAGTTGGCA
                      ____________________________________________________________
consensus GTGCAGTCGTTATCAATCTTGGAGATAACGAAGGAACTTTCAAGACTGCAAAAGTTGGCA
 
. : . : . : . : . : . :
rJMSF009O24+ TTGGCTAACAAGCTTGACCAAGACGATGTATCTGGTGGGACTTTTACTTTAAGCAACATT
rJMFF027C15+ TTGGCTAACAAGCTTGACCAAGACGATGTATCTGGTGGGACTTTTACTTTAAGCAACATT
rJMFF010A08+ TTGGCTAACAAGCTTGACCAAGACGATGTATCTGGTGGGACTTTTACTTTAAGCAACATT
                      ____________________________________________________________
consensus TTGGCTAACAAGCTTGACCAAGACGATGTATCTGGTGGGACTTTTACTTTAAGCAACATT
 
. : . : . : . : . : . :
rJMSF009O24+ GGAGCCATTGGAGGAAAGTACGGTTCCCCCCTTATTAACTCACCCGAAGTTGCCATCATT
rJMFF027C15+ GGAGCCATTGGAGGAAAGTACGGTTCCCCCCTTATTAACTCACCCGAAGTTGCCATCATT
rJMFF010A08+ GGAGCCATTGGAGGAAAGTACGGTTCCCCCCTTATTAACTCACCCGAAGTTGCCATCATT
                      ____________________________________________________________
consensus GGAGCCATTGGAGGAAAGTACGGTTCCCCCCTTATTAACTCACCCGAAGTTGCCATCATT
 
. : . : . : . : . : . :
rJMSF009O24+ GCGATGGGGCGGATCCAAAAGATCCCCCAATATGCCGAAGATGGAAATGTGTATCCTGCT
rJMFF027C15+ GCGATGGGGCGGATCCAAAAGATCCCCCAATATGCCGAAGATGGAAATGTGTATCCTGCT
rJMFF010A08+ GCGATGGGGCGGATCCAAAAGATCCCCCAATATGCCGAAGATGGAAATGTGTATCCTGCT
                      ____________________________________________________________
consensus GCGATGGGGCGGATCCAAAAGATCCCCCAATATGCCGAAGATGGAAATGTGTATCCTGCT
 
. : . : . : . : . : . :
rJMSF009O24+ TCAGTATTGACGGTAAATGTAGGCGCTGATCATAGAGTCCTCGATGGAGCTACGGTTGCA
rJMFF027C15+ TCAGTATTGACGGTAAATGTAGGCGCTGATCATAGAGTCCTCGATGGAGCTACGGTTGCA
rJMFF010A08+ TCAGTATTGACGGTAAATGTAGGCGCTGATCATAGAGTCCTCGATGGAGCTACGGTTGCA
                      ____________________________________________________________
consensus TCAGTATTGACGGTAAATGTAGGCGCTGATCATAGAGTCCTCGATGGAGCTACGGTTGCA
 
. : . : . : . : . : . :
rJMSF009O24+ AAGTTCTGCAATGAATGGAAACAATTTATTGAGAAACCTGAGCTTCTGATGTTGCATATG
rJMFF027C15+ AAGTTCTGCAATGAATGGAAACAATTTATTGAGAAACCTGAGCTTCTGATGTTGCATATG
rJMFF010A08+ AAGTTCTGCAATGAATGGAAACAATTTATTGAGAAACCTGAGCTTCTGATGTTGCATATG
                      ____________________________________________________________
consensus AAGTTCTGCAATGAATGGAAACAATTTATTGAGAAACCTGAGCTTCTGATGTTGCATATG
 
. : . : . : . : . : . :
rJMSF009O24+ AGATGAGCCATCTGCTTATTCCAGTTGTCCGTCCTATAAGAAAAGGGCAAACTTTTTAAA
rJMFF027C15+ AGATGAGCCATCTGCTTATTCCAGTTGTCCGTCCTATAAGAAAAGGGCAAACTTTTTAAA
rJMFF010A08+ AGATGAGCCATCTGCTTATTCCAGTTGTCCGTCCTATAAGAAAAGGGCAAACTTTTTAAA
                      ____________________________________________________________
consensus AGATGAGCCATCTGCTTATTCCAGTTGTCCGTCCTATAAGAAAAGGGCAAACTTTTTAAA
 
. : . : . : . : . : . :
rJMSF009O24+ TTGTGAGAATCGATTAATCGTCCAACGTTTTCTCCTATTCTGTAGACCAAAACTAAGAAA
rJMFF027C15+ TTGTGAGAATCGATTAATCGTCCAACGTTTTCTCCTATTCTGTAGACCAAAACTAAGAAA
rJMFF010A08+ TTGTGAGAATCGATTAATCGTCCAACGTTTTCTCCTATTCTGTAGACCAAAACTAAGAAA
                      ____________________________________________________________
consensus TTGTGAGAATCGATTAATCGTCCAACGTTTTCTCCTATTCTGTAGACCAAAACTAAGAAA
 
. : . : . : . : . : . :
rJMSF009O24+ AAAAGATGTTAGTTTTCTTTCATAGGAGCAATAAACTATA
rJMFF027C15+ AAAAGATGTTAGTTTTCTTTCATAGGAGCAATAAACTATATCTTATAACCAGATAAAAT
rJMFF010A08+ AAAAGATGTTAGTTTTCTTTCATAGGAGCAATAAACTATATCTTATAACCAGATAAAATT
                      ____________________________________________________________
consensus AAAAGATGTTAGTTTTCTTTCATAGGAGCAATAAACTATATCTTATAACCAGATAAAATT