Contig 003962:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009O24+                                  CTGCTGCAAAATTCCTCATTTCATTATGTTGAAGAG
                      ____________________________________________________________
consensus                                     CTGCTGCAAAATTCCTCATTTCATTATGTTGAAGAG
 
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rJMSF009O24+          ATAAATTGTAATGCACTTGTAGAGCTCAAAGGATCATTCCAAAAGGAAAACTCTGATCCA
                      ____________________________________________________________
consensus             ATAAATTGTAATGCACTTGTAGAGCTCAAAGGATCATTCCAAAAGGAAAACTCTGATCCA
 
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rJMSF009O24+          GAAGTCAAACACAGTTTTCTTCCTTTCTTAATAAAGTCTCTTTCCATGGCTTTGAATAAA
rJMFF027C15+                                    CTTAATAAAGTCTCTTTCCATGGCTTTGAATAAA
rJMFF010A08+                                    CTTAATAAAGTCTCTTTCCATGGCTTTGAATAAA
                      ____________________________________________________________
consensus             GAAGTCAAACACAGTTTTCTTCCTTTCTTAATAAAGTCTCTTTCCATGGCTTTGAATAAA
 
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rJMSF009O24+          TATCCCATGCTAAACAGTTGCTTCAAAGAGGAACTTTATGAGGTCACTGTTAAAGGATCT
rJMFF027C15+          TATCCCATGCTAAACAGTTGCTTCAAAGAGGAACTTTATGAGGTCACTGTTAAAGGATCT
rJMFF010A08+          TATCCCATGCTAAACAGTTGCTTCAAAGAGGAACTTTATGAGGTCACTGTTAAAGGATCT
                      ____________________________________________________________
consensus             TATCCCATGCTAAACAGTTGCTTCAAAGAGGAACTTTATGAGGTCACTGTTAAAGGATCT
 
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rJMSF009O24+          CACAACATTGGGATTGCAATGGCTACTCCACATGGTTTAGTTGTTCCAAACATAAAGAAG
rJMFF027C15+          CACAACATTGGGATTGCAATGGCTACTCCACATGGTTTAGTTGTTCCAAACATAAAGAAG
rJMFF010A08+          CACAACATTGGGATTGCAATGGCTACTCCACATGGTTTAGTTGTTCCAAACATAAAGAAG
                      ____________________________________________________________
consensus             CACAACATTGGGATTGCAATGGCTACTCCACATGGTTTAGTTGTTCCAAACATAAAGAAG
 
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rJMSF009O24+          GTGCAGTCGTTATCAATCTTGGAGATAACGAAGGAACTTTCAAGACTGCAAAAGTTGGCA
rJMFF027C15+          GTGCAGTCGTTATCAATCTTGGAGATAACGAAGGAACTTTCAAGACTGCAAAAGTTGGCA
rJMFF010A08+          GTGCAGTCGTTATCAATCTTGGAGATAACGAAGGAACTTTCAAGACTGCAAAAGTTGGCA
                      ____________________________________________________________
consensus             GTGCAGTCGTTATCAATCTTGGAGATAACGAAGGAACTTTCAAGACTGCAAAAGTTGGCA
 
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rJMSF009O24+          TTGGCTAACAAGCTTGACCAAGACGATGTATCTGGTGGGACTTTTACTTTAAGCAACATT
rJMFF027C15+          TTGGCTAACAAGCTTGACCAAGACGATGTATCTGGTGGGACTTTTACTTTAAGCAACATT
rJMFF010A08+          TTGGCTAACAAGCTTGACCAAGACGATGTATCTGGTGGGACTTTTACTTTAAGCAACATT
                      ____________________________________________________________
consensus             TTGGCTAACAAGCTTGACCAAGACGATGTATCTGGTGGGACTTTTACTTTAAGCAACATT
 
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rJMSF009O24+          GGAGCCATTGGAGGAAAGTACGGTTCCCCCCTTATTAACTCACCCGAAGTTGCCATCATT
rJMFF027C15+          GGAGCCATTGGAGGAAAGTACGGTTCCCCCCTTATTAACTCACCCGAAGTTGCCATCATT
rJMFF010A08+          GGAGCCATTGGAGGAAAGTACGGTTCCCCCCTTATTAACTCACCCGAAGTTGCCATCATT
                      ____________________________________________________________
consensus             GGAGCCATTGGAGGAAAGTACGGTTCCCCCCTTATTAACTCACCCGAAGTTGCCATCATT
 
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rJMSF009O24+          GCGATGGGGCGGATCCAAAAGATCCCCCAATATGCCGAAGATGGAAATGTGTATCCTGCT
rJMFF027C15+          GCGATGGGGCGGATCCAAAAGATCCCCCAATATGCCGAAGATGGAAATGTGTATCCTGCT
rJMFF010A08+          GCGATGGGGCGGATCCAAAAGATCCCCCAATATGCCGAAGATGGAAATGTGTATCCTGCT
                      ____________________________________________________________
consensus             GCGATGGGGCGGATCCAAAAGATCCCCCAATATGCCGAAGATGGAAATGTGTATCCTGCT
 
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rJMSF009O24+          TCAGTATTGACGGTAAATGTAGGCGCTGATCATAGAGTCCTCGATGGAGCTACGGTTGCA
rJMFF027C15+          TCAGTATTGACGGTAAATGTAGGCGCTGATCATAGAGTCCTCGATGGAGCTACGGTTGCA
rJMFF010A08+          TCAGTATTGACGGTAAATGTAGGCGCTGATCATAGAGTCCTCGATGGAGCTACGGTTGCA
                      ____________________________________________________________
consensus             TCAGTATTGACGGTAAATGTAGGCGCTGATCATAGAGTCCTCGATGGAGCTACGGTTGCA
 
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rJMSF009O24+          AAGTTCTGCAATGAATGGAAACAATTTATTGAGAAACCTGAGCTTCTGATGTTGCATATG
rJMFF027C15+          AAGTTCTGCAATGAATGGAAACAATTTATTGAGAAACCTGAGCTTCTGATGTTGCATATG
rJMFF010A08+          AAGTTCTGCAATGAATGGAAACAATTTATTGAGAAACCTGAGCTTCTGATGTTGCATATG
                      ____________________________________________________________
consensus             AAGTTCTGCAATGAATGGAAACAATTTATTGAGAAACCTGAGCTTCTGATGTTGCATATG
 
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rJMSF009O24+          AGATGAGCCATCTGCTTATTCCAGTTGTCCGTCCTATAAGAAAAGGGCAAACTTTTTAAA
rJMFF027C15+          AGATGAGCCATCTGCTTATTCCAGTTGTCCGTCCTATAAGAAAAGGGCAAACTTTTTAAA
rJMFF010A08+          AGATGAGCCATCTGCTTATTCCAGTTGTCCGTCCTATAAGAAAAGGGCAAACTTTTTAAA
                      ____________________________________________________________
consensus             AGATGAGCCATCTGCTTATTCCAGTTGTCCGTCCTATAAGAAAAGGGCAAACTTTTTAAA
 
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rJMSF009O24+          TTGTGAGAATCGATTAATCGTCCAACGTTTTCTCCTATTCTGTAGACCAAAACTAAGAAA
rJMFF027C15+          TTGTGAGAATCGATTAATCGTCCAACGTTTTCTCCTATTCTGTAGACCAAAACTAAGAAA
rJMFF010A08+          TTGTGAGAATCGATTAATCGTCCAACGTTTTCTCCTATTCTGTAGACCAAAACTAAGAAA
                      ____________________________________________________________
consensus             TTGTGAGAATCGATTAATCGTCCAACGTTTTCTCCTATTCTGTAGACCAAAACTAAGAAA
 
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rJMSF009O24+          AAAAGATGTTAGTTTTCTTTCATAGGAGCAATAAACTATA                    
rJMFF027C15+          AAAAGATGTTAGTTTTCTTTCATAGGAGCAATAAACTATATCTTATAACCAGATAAAAT 
rJMFF010A08+          AAAAGATGTTAGTTTTCTTTCATAGGAGCAATAAACTATATCTTATAACCAGATAAAATT
                      ____________________________________________________________
consensus             AAAAGATGTTAGTTTTCTTTCATAGGAGCAATAAACTATATCTTATAACCAGATAAAATT