Contig 003960:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF018K10+                                CATTTGCCGTTATAGCCNTGCACCCAAAGGTAAATGGA
                      ____________________________________________________________
consensus                                   CATTTGCCGTTATAGCCNTGCACCCAAAGGTAAATGGA
 
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rJMSF018K10+          AGTCTGTTGCCTGCTTCTGTGATATCTATCTATTGTGCGTATGTGTGCTATACCGGTCTC
                      ____________________________________________________________
consensus             AGTCTGTTGCCTGCTTCTGTGATATCTATCTATTGTGCGTATGTGTGCTATACCGGTCTC
 
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rJMSF018K10+          TCTAGTGAACCTCGAGATTATGCGTGCAATGGCCTGCACAAATCGAAAGCGGTTACTATC
                      ____________________________________________________________
consensus             TCTAGTGAACCTCGAGATTATGCGTGCAATGGCCTGCACAAATCGAAAGCGGTTACTATC
 
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rJMSF018K10+          GGTACCCTCGTTCTTGGGATGCTTACGACAGTTCTCTCGGTTCTGTATTCTGCTCTTCGT
                      ____________________________________________________________
consensus             GGTACCCTCGTTCTTGGGATGCTTACGACAGTTCTCTCGGTTCTGTATTCTGCTCTTCGT
 
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rJMSF018K10+          GCTGGGTCTTCGACCGCTTTTATGTCCCCGCCATCTTCTCCCAGATCAGGAGAAAGGAAA
rJMFF009E03+                        CGCTTTTATGTCCCCGCCATCTTCTCCCAGATCAGGAGAAAGGAAA
                      ____________________________________________________________
consensus             GCTGGGTCTTCGACCGCTTTTATGTCCCCGCCATCTTCTCCCAGATCAGGAGAAAGGAAA
 
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rJMSF018K10+          TCTCTTCTAGACTCTGACGAGCTGGAGTCTGGTAAAGCCAAGGGAGAACCGGTCAGTTAC
rJMFF009E03+          TCTCTTCTAGACTCTGACGAGCTGGAGTCTGGTAAAGCCAAGGGAGAACCGGTCAGTTAC
                      ____________________________________________________________
consensus             TCTCTTCTAGACTCTGACGAGCTGGAGTCTGGTAAAGCCAAGGGAGAACCGGTCAGTTAC
 
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rJMSF018K10+          TCGTACTCGTTCTTCCATCTGATATTCACCTTGGCTAGCATGTATTCCGCCATGCTTCTC
rJMFF009E03+          TCGTACTCGTTCTTCCATCTGATATTCACCTTGGCTAGCATGTATTCCGCCATGCTTCTC
                      ____________________________________________________________
consensus             TCGTACTCGTTCTTCCATCTGATATTCACCTTGGCTAGCATGTATTCCGCCATGCTTCTC
 
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rJMSF018K10+          GCCGGTTGGACTAGCAGCTCCGAGAGCACGGAGCTTATAGACGTCGGTTGGACCTCGGTT
rJMFF009E03+          GCCGGTTGGACTAGCAGCTCCGAGAGCACGGAGCTTATAGACGTCGGTTGGACCTCGGTT
                      ____________________________________________________________
consensus             GCCGGTTGGACTAGCAGCTCCGAGAGCACGGAGCTTATAGACGTCGGTTGGACCTCGGTT
 
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rJMSF018K10+          TGGGTTCGTATTTGCACTGGGTGGGTCACCGCCGCTCTCTATCTTTGGTCCCTCGTCGCA
rJMFF009E03+          TGGGTTCGTATTTGCACTGGGTGGGTCACCGCCGCTCTCTATCTTTGGTCCCTCGTCGCA
                      ____________________________________________________________
consensus             TGGGTTCGTATTTGCACTGGGTGGGTCACCGCCGCTCTCTATCTTTGGTCCCTCGTCGCA
 
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rJMSF018K10+          CCTCTGCTCTTCCCTGATCGTGAATTCTTCTGAATCTTGATCCTCTGATGGATTCATCGT
rJMFF009E03+          CCTCTGCTCTTCCCTGATCGTGAATTCTTCTGAATCTTGATCCTCTGATGGATTCATCGT
                      ____________________________________________________________
consensus             CCTCTGCTCTTCCCTGATCGTGAATTCTTCTGAATCTTGATCCTCTGATGGATTCATCGT
 
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rJMSF018K10+          TCATCTTGGATGTTAATATGTGTGTGTGTGTGTGTTCCATTATATGTATCTACATGTTAT
rJMFF009E03+          TCATCTTGGATGTTAATATGTGTGTGTGTGTGTGTTCCATTATATGTATCTACATGTTAT
                      ____________________________________________________________
consensus             TCATCTTGGATGTTAATATGTGTGTGTGTGTGTGTTCCATTATATGTATCTACATGTTAT
 
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rJMSF018K10+          ACGGGTTGTACCCAACTATTGATTGTTATAATCATGTTTGTATTGTGTTTCTGACTTGAT
rJMFF009E03+          ACGGGTTGTACCCAACTATTGATTGTTATAATCATGTTTGTATTGTGTTTCTGACTTGAT
                      ____________________________________________________________
consensus             ACGGGTTGTACCCAACTATTGATTGTTATAATCATGTTTGTATTGTGTTTCTGACTTGAT
 
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rJMSF018K10+          AAACACTTGTTTATCTAAGTATGGTGAACATTA                           
rJMFF009E03+          AAACACTTGTTTATCTAAGTATGGTGAACATTACTAGTATTTAGCTTAAAGAAATTGTGT
                      ____________________________________________________________
consensus             AAACACTTGTTTATCTAAGTATGGTGAACATTACTAGTATTTAGCTTAAAGAAATTGTGT
 
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rJMFF009E03+          TGACGTTATTTGTGATACCGCTCTTGCTCTAGAATCTAGTGGAGGAGGTAATTCTTATTG
                      ____________________________________________________________
consensus             TGACGTTATTTGTGATACCGCTCTTGCTCTAGAATCTAGTGGAGGAGGTAATTCTTATTG
 
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rJMFF009E03+          GGGTGCGTTTTAATTAGTCTTTAGTACCTTGTTTTTTGTGACTGTTAGTAAAGTAAAATT
                      ____________________________________________________________
consensus             GGGTGCGTTTTAATTAGTCTTTAGTACCTTGTTTTTTGTGACTGTTAGTAAAGTAAAATT
 
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rJMFF009E03+          TTGATTTATTTTGAATTGATTGACCAGTTGAACTTTGTTTGGAGTTAGCAAAGTAAAATT
                      ____________________________________________________________
consensus             TTGATTTATTTTGAATTGATTGACCAGTTGAACTTTGTTTGGAGTTAGCAAAGTAAAATT