Contig 003959:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009C03Sequence551003959 (4)ref|XP_009603301.1|6e-89PREDICTED: pleckstrin homology domain-containing protein 1-like [Nicotiana tome627003959 (4)ref|XP_009603301.1|1e-88PREDICTED: pleckstrin homology domain-containing protein 1-like [Nicotiana tome
JMFF033M08Sequence581003959 (4)ref|XP_009603301.1|1e-88PREDICTED: pleckstrin homology domain-containing protein 1-like [Nicotiana tome618003959 (4)ref|XP_009603301.1|1e-88PREDICTED: pleckstrin homology domain-containing protein 1-like [Nicotiana tome

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF033M08- CACACGAGATTCCATTGAAGGGCCGTC
JMFF009C03- CACACGAGATTCCATTGAAGGGCCGTC
rJMFF033M08+ CACACGAGATTCCATTGAAGGGCCGTC
rJMFF009C03+ CACACGAGATTCCATTGAAGGGCCGTC
                      ____________________________________________________________
consensus CACACGAGATTCCATTGAAGGGCCGTC
 
. : . : . : . : . : . :
JMFF033M08- ATGGCGAGCCTGTGGCAAGCGGTGATGGGCTCCGGGCAGTCGTCGGCGTCGAGCGAGGAC
JMFF009C03- ATGGCGAGCCTGTGGCAAGCGGTGATGGGCTCCGGGCAGTCGTCGGCGTCGAGCGAGGAC
rJMFF033M08+ ATGGCGAGCCTGTGGCAAGCGGTGATGGGCTCCGGGCAGTCGTCGGCGTCGAGCGAGGAC
rJMFF009C03+ ATGGCGAGCCTGTGGCAAGCGGTGATGGGCTCCGGGCAGTCGTCGGCGTCGAGCGAGGAC
                      ____________________________________________________________
consensus ATGGCGAGCCTGTGGCAAGCGGTGATGGGCTCCGGGCAGTCGTCGGCGTCGAGCGAGGAC
 
. : . : . : . : . : . :
JMFF033M08- TACGACGGGGTGCAGTTCTGGTCGAGCCCTGAGCGGACCGGGTGGCTGACGAAGCAGGGC
JMFF009C03- TACGACGGGGTGCAGTTCTGGTCGAGCCCTGAGCGGACCGGGTGGCTGACGAAGCAGGGC
rJMFF033M08+ TACGACGGGGTGCAGTTCTGGTCGAGCCCTGAGCGGACCGGGTGGCTGACGAAGCAGGGC
rJMFF009C03+ TACGACGGGGTGCAGTTCTGGTCGAGCCCTGAGCGGACCGGGTGGCTGACGAAGCAGGGC
                      ____________________________________________________________
consensus TACGACGGGGTGCAGTTCTGGTCGAGCCCTGAGCGGACCGGGTGGCTGACGAAGCAGGGC
 
. : . : . : . : . : . :
JMFF033M08- GAGTACATCAAGACGTGGCGGCGCCGCTGGTTTGTGCTCAAGCAAGGGAAGCTCTTCTGG
JMFF009C03- GAGTACATCAAGACGTGGCGGCGCCGCTGGTTTGTGCTCAAGCAAGGGAAGCTCTTCTGG
rJMFF033M08+ GAGTACATCAAGACGTGGCGGCGCCGCTGGTTTGTGCTCAAGCAAGGGAAGCTCTTCTGG
rJMFF009C03+ GAGTACATCAAGACGTGGCGGCGCCGCTGGTTTGTGCTCAAGCAAGGGAAGCTCTTCTGG
                      ____________________________________________________________
consensus GAGTACATCAAGACGTGGCGGCGCCGCTGGTTTGTGCTCAAGCAAGGGAAGCTCTTCTGG
 
. : . : . : . : . : . :
JMFF033M08- TTCAAGGAGTCCAACGTCACCCGCGGATCGCGCCCCCGCGGCGTCATCCCCGTCGCCACT
JMFF009C03- TTCAAGGAGTCCAACGTCACCCGCGGATCGCGCCCCCGCGGCGTCATCCCCGTCGCCACT
rJMFF033M08+ TTCAAGGAGTCCAACGTCACCCGCGGATCGCGCCCCCGCGGCGTCATCCCCGTCGCCACT
rJMFF009C03+ TTCAAGGAGTCCAACGTCACCCGCGGATCGCGCCCCCGCGGCGTCATCCCCGTCGCCACT
                      ____________________________________________________________
consensus TTCAAGGAGTCCAACGTCACCCGCGGATCGCGCCCCCGCGGCGTCATCCCCGTCGCCACT
 
. : . : . : . : . : . :
JMFF033M08- TGCCTCACAGTGAAGGGCGCCGAGGACGTGCTGAACAAGCAGTTCGCCTTCGAGCTCTCC
JMFF009C03- TGCCTCACAGTGAAGGGCGCCGAGGACGTGCTGAACAAGCAGTTCGCCTTCGAGCTCTCC
rJMFF033M08+ TGCCTCACAGTGAAGGGCGCCGAGGACGTGCTGAACAAGCAGTTCGCCTTCGAGCTCTCC
rJMFF009C03+ TGCCTCACAGTGAAGGGCGCCGAGGACGTGCTGAACAAGCAGTTCGCCTTCGAGCTCTCC
                      ____________________________________________________________
consensus TGCCTCACAGTGAAGGGCGCCGAGGACGTGCTGAACAAGCAGTTCGCCTTCGAGCTCTCC
 
. : . : . : . : . : . :
JMFF033M08- ACCCGCGCCGACACCATGTACTTCATCGCCGATTCCGAGAAGGAGAAGGAGGACTGGATC
JMFF009C03- ACCCGCGCCGACACCATGTACTTCATCGCCGATTCCGAGAAGGAGAAGGAGGACTGGATC
rJMFF033M08+ ACCCGCGCCGACACCATGTACTTCATCGCCGATTCCGAGAAGGAGAAGGAGGACTGGATC
rJMFF009C03+ ACCCGCGCCGACACCATGTACTTCATCGCCGATTCCGAGAAGGAGAAGGAGGACTGGATC
                      ____________________________________________________________
consensus ACCCGCGCCGACACCATGTACTTCATCGCCGATTCCGAGAAGGAGAAGGAGGACTGGATC
 
. : . : . : . : . : . :
JMFF033M08- AATTCCATCGGACGATCCATAGTTCAGCACTCCAG
JMFF009C03- AATTCCATCGGACGATCCATAGTTCAGCACTCCAGGTCAGTTACTGATAACGAGATCCTC
rJMFF033M08+ AATTCCATCGGACGATCCATAGTTCAGCACTCCAGGTCAGTTACTGATAACGAGATCCTC
rJMFF009C03+ AATTCCATCGGACGATCCATAGTTCAGCACTCCAGGTCAGTTACTGATAACGAGATCCTC
                      ____________________________________________________________
consensus AATTCCATCGGACGATCCATAGTTCAGCACTCCAGGTCAGTTACTGATAACGAGATCCTC
 
. : . : . : . : . : . :
JMFF009C03- GATTACGATAGCCGCAAATAAATTCAATTTTTGTTTTTCAAAATCCTGTTTGTTTACCTA
rJMFF033M08+ GATTACGATAGCCGCAAATAAATTCAATTTTTGTTTTTCAAAATCCTGTTTGTTTACCTA
rJMFF009C03+ GATTACGATAGCCGCAAATAAATTCAATTTTTGTTTTTCAAAATCCTGTTTGTTTACCTA
                      ____________________________________________________________
consensus GATTACGATAGCCGCAAATAAATTCAATTTTTGTTTTTCAAAATCCTGTTTGTTTACCTA
 
. : . : . : . : . : . :
JMFF009C03- ATCGCGCTTCTTCCTTCATCTTTGTTTATTTTATTTGGAGATTG
rJMFF033M08+ ATCGCGCTTCTTCCTTCATCTTTGTTTATTTTATTTGGAGATTGGAATTGCTTCTCTTCT
rJMFF009C03+ ATCGCGCTTCTTCCTTCATCTTTGTTTATTTTATTTGGAGATTGGAATTGCTTCTCTTCT
                      ____________________________________________________________
consensus ATCGCGCTTCTTCCTTCATCTTTGTTTATTTTATTTGGAGATTGGAATTGCTTCTCTTCT
 
. : . : . : . : . : . :
rJMFF033M08+ TTTGCTTCTATGTGTATTTATGGTTTGCTATGGAAGTTGTAAGTATCGGAT
rJMFF009C03+ TTTGCTTCTATGTGTATTTATGATTTGCTATGGAAGTTGTAAGTATCGGATGAAACAGAA
                      ____________________________________________________________
consensus TTTGCTTCTATGTGTATTTATGGTTTGCTATGGAAGTTGTAAGTATCGGATGAAACAGAA